tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.190043 (123 seq.)
>W1710785699 LJIC01000011 Alphaproteobacteria Rhodopseudomonas sp. AAP120 [LJIC] 16630 16706 + Met CAT [ENA] ¡û
>W1710802978 LJYF01000029 Alphaproteobacteria Bradyrhizobium yuanmingense [LJYF] 199028 198952 - Met CAT [ENA] ¡û
>W1711067381 LSEF01000022 Alphaproteobacteria Bradyrhizobium neotropicale [LSEF] 29628 29552 - Met CAT [ENA] ¡û
>W1711072983 LSIC01000064 Alphaproteobacteria Bradyrhizobium sp. CCH5-F6 [LSIC] 48445 48369 - Met CAT [ENA] ¡û
>W1711124813 LUKO01000174 Alphaproteobacteria Bradyrhizobium liaoningense [LUKO] 11222 11146 - Met CAT [ENA] ¡û
>W1711129601 LUUB01000074 Alphaproteobacteria Bradyrhizobium centrolobii BR 10245 [LUUB] 59075 59151 + Met CAT [ENA] ¡û
>W1711180133 LWIG01000052 Alphaproteobacteria Bradyrhizobium sacchari BR10280 [LWIG] 63796 63720 - Met CAT [ENA] ¡û
>W1711188773 LWQT01000037 Alphaproteobacteria Paramagnetospirillum marisnigri [LWQT] 14706 14630 - Met CAT [ENA] ¡û
>W1711188817 LWQU01000042 Alphaproteobacteria Magnetospirillum moscoviense [LWQU] 1171 1247 + Met CAT [ENA] ¡û
>W1711193133 LWUI01000010 Alphaproteobacteria Bradyrhizobium elkanii [LWUI] 77354 77278 - Met CAT [ENA] ¡û
>W1711206716 LXEM01000004 Alphaproteobacteria Bradyrhizobium elkanii [LXEM] 473996 473920 - Met CAT [ENA] ¡û
>W1711487056 MKFI01000003 Alphaproteobacteria Bradyrhizobium mercantei SEMIA 6399 [MKFI] 682433 682509 + Met CAT [ENA] ¡û
>W1711505326 MKVK01000011 Alphaproteobacteria Magnetospirillum sp. 64-120 [MKVK] 57546 57470 - Met CAT [ENA] ¡û
>W1711505900 MKVY01000014 Alphaproteobacteria Rhizobiales bacterium 65-9 [MKVY] 9061 8985 - Met CAT [ENA] ¡û
>W1711612974 MOXO01000013 Alphaproteobacteria Bradyrhizobium elkanii [MOXO] 3242 3318 + Met CAT [ENA] ¡û
>W131164117 ARAG01000011 Alphaproteobacteria Bradyrhizobium elkanii USDA 76 [ARAG] 1633170 1633094 - Met CAT [ENA] ¡û
>W131217293 ATWP01000001 Alphaproteobacteria Bradyrhizobium japonicum is5 [ATWP] 1111013 1111089 + Met CAT [ENA] ¡û
>W131227235 AUEZ01000051 Alphaproteobacteria Bradyrhizobium sp. Ai1a-2 [AUEZ] 70676 70752 + Met CAT [ENA] ¡û
>W131227281 AUFA01000013 Alphaproteobacteria Bradyrhizobium sp. Cp5.3 [AUFA] 178353 178429 + Met CAT [ENA] ¡û
>W131228666 AUGD01000001 Alphaproteobacteria Bradyrhizobium japonicum in8p8 [AUGD] 18406 18330 - Met CAT [ENA] ¡û
>W131166443 ARCM01000001 Alphaproteobacteria Ancylobacter sp. FA202 [ARCM] 350288 350364 + Met CAT [ENA] ¡û
>W131228532 AUGA01000005 Alphaproteobacteria Bradyrhizobium sp. th.b2 [AUGA] 11082 11006 - Met CAT [ENA] ¡û
>C004041 CP000494 Alphaproteobacteria Bradyrhizobium sp. BTAi1 [CP000494] 1951990 1952066 + Met CAT [Ensembl] ¡û
>C004106 CU234118 Alphaproteobacteria Bradyrhizobium sp. ORS 278 ORS278 [CU234118] 6111881 6111805 - Met CAT [Ensembl] ¡û
>C013764 AP007255 Alphaproteobacteria Magnetospirillum magneticum AMB-1 [AP007255] 3263385 3263309 - Met CAT [Ensembl] ¡û
>C171131931 LT859959 Alphaproteobacteria Bradyrhizobium sp. ORS 285 [LT859959] 1063207 1063283 + Met CAT - ¡û
>WENV180015674 FSSO01000044 [FSSO] metagenome; soil 2416 2340 - Met CAT [ENA] ¢þ
>W141001327 ADOU01000138 Alphaproteobacteria Bradyrhizobium diazoefficiens SEMIA 5080 [ADOU] 6078 6002 - Met CAT [ENA] ¡û
>WENV180635791 OCRE01009092 [OCRE] marine metagenome; Seawater 438 362 - Met CAT [ENA] ¢þ
>WENV181166171 OEIS01520539 [OEIS] soil metagenome; soil 162 86 - Met CAT [ENA] ¢þ
>WENV181379404 OFRD01001183 [OFRD] wastewater metagenome; Exp Tend CN 100WW 4727 4651 - Met CAT [ENA] ¢þ
>WENV181385961 OFRL01000216 [OFRL] wastewater metagenome; Lake Maggiore Cannobio 4727 4651 - Met CAT [ENA] ¢þ
>WENV181399882 OFSF01000136 [OFSF] wastewater metagenome; Exp Tend VB 100WW 17548 17624 + Met CAT [ENA] ¢þ
>W141149738 AWZU01000001 Alphaproteobacteria Bradyrhizobium sp. ARR65 [AWZU] 378966 379042 + Met CAT [ENA] ¡û
>W141150130 AXAD01000006 Alphaproteobacteria Bradyrhizobium arachidis USDA 3384 [AXAD] 12821 12745 - Met CAT [ENA] ¡û
>W141150336 AXAH01000022 Alphaproteobacteria Bradyrhizobium elkanii USDA 3254 [AXAH] 91296 91372 + Met CAT [ENA] ¡û
>W141150348 AXAI01000001 Alphaproteobacteria Bradyrhizobium sp. Tv2a-2 [AXAI] 403158 403082 - Met CAT [ENA] ¡û
>W141150725 AXAP01000028 Alphaproteobacteria Bradyrhizobium elkanii WSM2783 [AXAP] 33925 33849 - Met CAT [ENA] ¡û
>W141150992 AXAS01000013 Alphaproteobacteria Bradyrhizobium sp. Ec3.3 [AXAS] 174473 174397 - Met CAT [ENA] ¡û
>W141151232 AXAX01000005 Alphaproteobacteria Bradyrhizobium diazoefficiens USDA 122 [AXAX] 441886 441962 + Met CAT [ENA] ¡û
>W141151320 AXAZ01000015 Alphaproteobacteria Bradyrhizobium sp. WSM1743 [AXAZ] 148506 148582 + Met CAT [ENA] ¡û
>W141151481 AXBC01000006 Alphaproteobacteria Bradyrhizobium genosp. SA-4 SA-4 str. CB756 [AXBC] 397524 397448 - Met CAT [ENA] ¡û
>W141168851 AXVG01000018 Alphaproteobacteria Bradyrhizobium japonicum 22 [AXVG] 11231 11155 - Met CAT [ENA] ¡û
>W141213977 AZSJ01000003 Alphaproteobacteria Afipia sp. P52-10 [AZSJ] 2628281 2628357 + Met CAT [ENA] ¡û
>W141220018 AZXM01000002 Alphaproteobacteria Rhodovibrio salinarum DSM 9154 [AZXM] 2834008 2833932 - Met CAT [ENA] ¡û
>W141223324 BADD01000558 Alphaproteobacteria Rhodopseudomonas sp. B29 [BADD] 2517 2441 - Met CAT [ENA] ¡û
>W141233884 BAWE01000004 Alphaproteobacteria Bradyrhizobium sp. DOA9 [BAWE] 675163 675239 + Met CAT [ENA] ¡û
>WENV182411645 OIFP01009934 [OIFP] human gut metagenome; stool 521 597 + Met CAT [ENA] ¢þ
>W141240086 CAFK01000179 Alphaproteobacteria Bradyrhizobium sp. STM 3843 [CAFK] 16476 16552 + Met CAT [ENA] ¡û
>W141266762 CCNA01000006 Alphaproteobacteria Mesorhizobium sp. SOD10 [CCNA] 299132 299208 + Met CAT [ENA] ¡û
>W141278135 JAFC01000057 Alphaproteobacteria Bradyrhizobium elkanii USDA 94 [JAFC] 4757 4681 - Met CAT [ENA] ¡û
>WENV182955005 OKWB01003326 [OKWB] human gut metagenome; stool 283 359 + Met CAT [ENA] ¢þ
>WENV182963036 OKWP01000112 [OKWP] human gut metagenome; stool 1565 1489 - Met CAT [ENA] ¢þ
>WENV182967364 OKWZ01005536 [OKWZ] human gut metagenome; stool 502 426 - Met CAT [ENA] ¢þ
>WENV170002821 AGTN01139326 [AGTN] bioreactor metagenome; poplar biomass 2689 2765 + Met CAT [ENA] ¢þ
>WENV170231832 CEQH01284529 [CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 24804 24728 - Met CAT [ENA] ¢þ
>WENV170259816 CEQY01211556 [CEQY] marine metagenome genome assembly TARA_070_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 444 368 - Met CAT [ENA] ¢þ
>WENV170352871 CETH01386230 [CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 901 977 + Met CAT [ENA] ¢þ
>WENV170410889 CEUJ01143814 [CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 100886 100810 - Met CAT [ENA] ¢þ
>WENV170417378 CEUL01313164 [CEUL] marine metagenome genome assembly TARA_124_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 570 494 - Met CAT [ENA] ¢þ
>WENV170486753 CEVN01362427 [CEVN] marine metagenome genome assembly TARA_142_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1463 1539 + Met CAT [ENA] ¢þ
>WENV170787135 MDSV01013743 [MDSV] marine metagenome; seawater 7309 7385 + Met CAT [ENA] ¢þ
>WENV170802686 MDSW01017921 [MDSW] marine metagenome; seawater 412 488 + Met CAT [ENA] ¢þ
>WENV170803181 MDSW01026061 [MDSW] marine metagenome; seawater 3703 3627 - Met CAT [ENA] ¢þ
>WENV170830844 MDSZ01033905 [MDSZ] marine metagenome; seawater 8908 8832 - Met CAT [ENA] ¢þ
>WENV170856514 MDTA01225031 [MDTA] marine metagenome; seawater 740 816 + Met CAT [ENA] ¢þ
>WENV170903057 MDTD01196049 [MDTD] marine metagenome; seawater 6390 6466 + Met CAT [ENA] ¢þ
>C181155097 CP027526 Alphaproteobacteria Magnetospirillum gryphiswaldense MSR-1 [CP027526] 879460 879384 - Met CAT - ¡û
>C181155147 CP027527 Alphaproteobacteria Magnetospirillum gryphiswaldense R3/S1 [CP027527] 879460 879384 - Met CAT - ¡û
>C191019747 CP022221 Alphaproteobacteria Bradyrhizobium zhanjiangense CCBAU 51778 [CP022221] 8538814 8538738 - Met CAT - ¡û
>W09104098 AALJ01000001 Alphaproteobacteria Bradyrhizobium sp. BTAi1 [AALJ] 1104837 1104913 + Met CAT [ENA] ¡û
>W1910183125 BJNL01000031 Alphaproteobacteria Bradyrhizobium elkanii NBRC 14791 [BJNL] 35992 36068 + Met CAT [ENA] ¡û
>W1910498995 FXXN01000028 Alphaproteobacteria Magnetospirillum sp. 15-1 [FXXN] 687543 687619 + Met CAT [ENA] ¡û
>W1910598950 LBJC01000028 Alphaproteobacteria Bradyrhizobium nanningense CCBAU 53390 [LBJC] 209125 209049 - Met CAT [ENA] ¡û
>W1910598981 LBJM01000011 Alphaproteobacteria Bradyrhizobium zhanjiangense CCBAU 51787 [LBJM] 100281 100205 - Met CAT [ENA] ¡û
>W1910599025 LBJQ01000006 Alphaproteobacteria Bradyrhizobium nanningense CCBAU 51757 [LBJQ] 143503 143427 - Met CAT [ENA] ¡û
>W1910693488 MDEP01000052 Alphaproteobacteria Bradyrhizobium sp. UASWS1016 [MDEP] 815820 815744 - Met CAT [ENA] ¡û
>W1911245303 NSJY01000020 Alphaproteobacteria Bradyrhizobium sp. UFLA03-84 [NSJY] 143462 143386 - Met CAT [ENA] ¡û
>W1911629538 PSRS01000019 Alphaproteobacteria Bradyrhizobium sp. Leo121 [PSRS] 7952 8028 + Met CAT [ENA] ¡û
>W1911629591 PSRT01000026 Alphaproteobacteria Bradyrhizobium genosp. SA-3 SA-3 Rp7b [PSRT] 33310 33234 - Met CAT [ENA] ¡û
>W1911760550 QWVU01000003 Alphaproteobacteria Rhodopseudomonas palustris R1 [QWVU] 63082 63006 - Met CAT [ENA] ¡û
>W1911817847 QZMV01000001 Alphaproteobacteria Bradyrhizobium sp. LVM 105 [QZMV] 43387 43463 + Met CAT [ENA] ¡û
>W1810101807 PGTO01000010 Alphaproteobacteria Paramagnetospirillum kuznetsovii LBB-42 [PGTO] 128692 128768 + Met CAT [ENA] ¡û
>W1810104426 PGVG01000016 Alphaproteobacteria Bradyrhizobium forestalis INPA54B [PGVG] 99533 99457 - Met CAT [ENA] ¡û
>W1810400102 PYFV01000005 Alphaproteobacteria Bradyrhizobium sp. MOS004 [PYFV] 138548 138624 + Met CAT [ENA] ¡û
>W1810679422 QKQS01000009 Alphaproteobacteria Rhodopseudomonas palustris XCP [QKQS] 28509 28433 - Met CAT [ENA] ¡û
>W1810787529 QRDT01000036 Alphaproteobacteria Rhodopseudomonas pentothenatexigens JA575 [QRDT] 11847 11771 - Met CAT [ENA] ¡û
>W1810884426 QUMP01000036 Alphaproteobacteria Rhodopseudomonas thermotolerans JA576,NBRC 108863,KCTC 15144 [QUMP] 11847 11771 - Met CAT [ENA] ¡û
>W10110077 ADBQ01000004 Alphaproteobacteria Ancylobacter novellus DSM 506 [ADBQ] 283391 283315 - Met CAT [ENA] ¡û
>C10110745 CP001096 Alphaproteobacteria Rhodopseudomonas palustris TIE-1 [CP001096] 1581285 1581361 + Met CAT [Ensembl] ¡û
>C10112211 CP002026 Alphaproteobacteria Ancylobacter novellus DSM 506 [CP002026] 2639555 2639479 - Met CAT [Ensembl] ¡û
>W11112514 ADBQ01000004 Alphaproteobacteria Ancylobacter novellus DSM 506 [ADBQ] 283391 283315 - Met CAT [ENA] ¡û
>C11118768 CP002418 Alphaproteobacteria Rhodopseudomonas palustris [CP002418] 4460724 4460648 - Met CAT [Ensembl] ¡û
>W1511508002 JXOF01000185 Alphaproteobacteria Bradyrhizobium elkanii UASWS1015 [JXOF] 453652 453576 - Met CAT [ENA] ¡û
>W1511681421 LFIP01000065 Alphaproteobacteria Bradyrhizobium embrapense SEMIA 6208 [LFIP] 21916 21992 + Met CAT [ENA] ¡û
>W1511681489 LFIQ01000119 Alphaproteobacteria Bradyrhizobium pachyrhizi PAC 48 [LFIQ] 429634 429558 - Met CAT [ENA] ¡û
>W1511684052 LFLZ01000119 Alphaproteobacteria Bradyrhizobium tropiciagri SEMIA 6148 [LFLZ] 10969 10893 - Met CAT [ENA] ¡û
>W1511706717 LGUJ01000033 Alphaproteobacteria Bradyrhizobium diazoefficiens Is-1 [LGUJ] 6099 6023 - Met CAT [ENA] ¡û
>C161001057 AP014685 Alphaproteobacteria Bradyrhizobium diazoefficiens NK6 [AP014685] 1850501 1850425 - Met CAT - ¡û
>C161097210 CP016428 Alphaproteobacteria Bradyrhizobium icense LMTR 13 [CP016428] 6992246 6992170 - Met CAT [Ensembl] ¡û
>W121065247 AJPW01000139 Alphaproteobacteria Bradyrhizobium elkanii CCBAU 43297 [AJPW] 3216 3292 + Met CAT [ENA] ¡û
>W121065377 AJPZ01000045 Alphaproteobacteria Bradyrhizobium japonicum CCBAU 15618 [AJPZ] 3758 3834 + Met CAT [ENA] ¡û
>W121065556 AJQC01000670 Alphaproteobacteria Bradyrhizobium liaoningense CCBAU 05525 [AJQC] 3553 3629 + Met CAT [ENA] ¡û
>W121065623 AJQE01000139 Alphaproteobacteria Bradyrhizobium sp. CCBAU 43298 [AJQE] 1924 2000 + Met CAT [ENA] ¡û
>W121065883 AJQJ01000376 Alphaproteobacteria Bradyrhizobium yuanmingense CCBAU 05623 [AJQJ] 27817 27741 - Met CAT [ENA] ¡û
>W121127102 CAFH01000270 Alphaproteobacteria Bradyrhizobium sp. ORS 285 [CAFH] 205 281 + Met CAT [ENA] ¡û
>W121127128 CAFI01000188 Alphaproteobacteria Bradyrhizobium sp. ORS 375 [CAFI] 87 11 - Met CAT [ENA] ¡û
>W1610049379 BBEX01000011 Alphaproteobacteria Bradyrhizobium sp. 17-4 [BBEX] 296 372 + Met CAT [ENA] ¡û
>W1610514419 FMAE01000003 Alphaproteobacteria Bradyrhizobium yuanmingense [FMAE] 681382 681458 + Met CAT [ENA] ¡û
>W1610649505 LJIC01000011 Alphaproteobacteria Rhodopseudomonas sp. AAP120 [LJIC] 16630 16706 + Met CAT [ENA] ¡û
>W1610666835 LJYF01000029 Alphaproteobacteria Bradyrhizobium yuanmingense [LJYF] 199028 198952 - Met CAT [ENA] ¡û
>W1610907951 LSEF01000022 Alphaproteobacteria Bradyrhizobium neotropicale [LSEF] 29628 29552 - Met CAT [ENA] ¡û
>W1610912243 LSIC01000064 Alphaproteobacteria Bradyrhizobium sp. CCH5-F6 [LSIC] 48445 48369 - Met CAT [ENA] ¡û
>W1610935785 LUKO01000174 Alphaproteobacteria Bradyrhizobium liaoningense [LUKO] 11222 11146 - Met CAT [ENA] ¡û
>W1610940674 LUUB01000074 Alphaproteobacteria Bradyrhizobium centrolobii BR 10245 [LUUB] 59075 59151 + Met CAT [ENA] ¡û
>W1610990892 LWQT01000037 Alphaproteobacteria Paramagnetospirillum marisnigri [LWQT] 14706 14630 - Met CAT [ENA] ¡û
>W1610990936 LWQU01000042 Alphaproteobacteria Magnetospirillum moscoviense [LWQU] 1171 1247 + Met CAT [ENA] ¡û
>W1710045778 BBEX01000011 Alphaproteobacteria Bradyrhizobium sp. 17-4 [BBEX] 296 372 + Met CAT [ENA] ¡û
>W1710500109 FMAE01000003 Alphaproteobacteria Bradyrhizobium yuanmingense [FMAE] 681382 681458 + Met CAT [ENA] ¡û
>W1710505298 FMTP01000001 Alphaproteobacteria Ancylobacter rudongensis [FMTP] 192561 192485 - Met CAT [ENA] ¡û
>W1710571320 FOVU01000016 Alphaproteobacteria Bradyrhizobium sp. Ghvi [FOVU] 94771 94847 + Met CAT [ENA] ¡û
>W1710735583 LGHK01000058 Alphaproteobacteria Bradyrhizobium sp. NAS96.2 [LGHK] 13471 13395 - Met CAT [ENA] ¡û
>W1710735710 LGHM01000173 Alphaproteobacteria Bradyrhizobium sp. AS23.2 [LGHM] 14998 14922 - Met CAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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