This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.198359 (6 seq.)
>C171101148
CP019937
Alphaproteobacteria
Ketogulonicigenium robustum SPU_B003 [CP019937]
1884544
1884620
+
His
GTG
-
¡û
>WENV170714044
LNFM01051845
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
2567
2643
+
His
GTG
[ENA]
¢þ
>C11111806
CP002018
Alphaproteobacteria
Ketogulonicigenium vulgare WSH-001 [CP002018]
1944904
1944980
+
His
GTG
[Ensembl]
¡û
>C11111871
CP002224
Alphaproteobacteria
Ketogulonicigenium vulgare Y25 [CP002224]
2230599
2230675
+
His
GTG
[Ensembl]
¡û
>C161047264
CP012908
Alphaproteobacteria
Ketogulonicigenium vulgare Hbe602 [CP012908]
2335403
2335479
+
His
GTG
-
¡û
>C161099991
CP016592
Alphaproteobacteria
Ketogulonicigenium vulgare SKV [CP016592]
2334321
2334397
+
His
GTG
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK