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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.202787 (4 seq.)
>C191079621
CP031746
Actinomycetota
Auritidibacter sp. NML130574 [CP031746]
1214509
1214433
-
Met
CAT
-
¡û
>W1810626799
QHLM01000018
Actinomycetota
Auritidibacter sp. NML130574 [QHLM]
35226
35150
-
Met
CAT
[ENA]
¡û
>W1810626887
QHLO01000016
Actinomycetota
Auritidibacter sp. NML120636 [QHLO]
35052
35128
+
Met
CAT
[ENA]
¡û
>W1810626902
QHLP01000004
Actinomycetota
Auritidibacter sp. NML100628 [QHLP]
35268
35192
-
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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