This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.203840 (27 seq.)
>WENV180200331
OBAE01028749
[OBAE] human gut metagenome; human gut
205
129
-
Leu
TAG
[ENA]
¢þ
>WENV180211756
OBAM01020411
[OBAM] human gut metagenome; human gut
382
306
-
Leu
TAG
[ENA]
¢þ
>WENV181330773
OFLZ01000046
[OFLZ] human gut metagenome; human gut
94884
94808
-
Leu
TAG
[ENA]
¢þ
>WENV181417282
OGCM01000096
[OGCM] human gut metagenome; human gut
122094
122018
-
Leu
TAG
[ENA]
¢þ
>WENV181498840
OGGG01000034
[OGGG] metagenome; Human gut stool
76875
76799
-
Leu
TAG
[ENA]
¢þ
>WENV181646764
OGNP01000003
[OGNP] metagenome; Human gut stool
138214
138290
+
Leu
TAG
[ENA]
¢þ
>WENV181893890
OGXQ01009247
[OGXQ] human gut metagenome; faeces
751
827
+
Leu
TAG
[ENA]
¢þ
>WENV181908482
OGYB01000060
[OGYB] human gut metagenome; faeces
43813
43737
-
Leu
TAG
[ENA]
¢þ
>WENV182624656
OJKO01010183
[OJKO] metagenome; faeces
1506
1430
-
Leu
TAG
[ENA]
¢þ
>WENV183170462
OLPB01000007
[OLPB] human gut metagenome; faeces
33925
33849
-
Leu
TAG
[ENA]
¢þ
>WENV183188557
OLPP01002679
[OLPP] human gut metagenome; faeces
845
921
+
Leu
TAG
[ENA]
¢þ
>WENV183230724
OLQT01005275
[OLQT] human gut metagenome; faeces
3900
3824
-
Leu
TAG
[ENA]
¢þ
>WENV183291769
OLSI01012506
[OLSI] human gut metagenome; faeces
1024
1100
+
Leu
TAG
[ENA]
¢þ
>WENV183325667
OLVZ01001648
[OLVZ] human gut metagenome; faeces
6203
6127
-
Leu
TAG
[ENA]
¢þ
>WENV183389054
OLZA01005093
[OLZA] human gut metagenome; feces
679
755
+
Leu
TAG
[ENA]
¢þ
>WENV183390314
OLZB01022452
[OLZB] human gut metagenome; feces
257
181
-
Leu
TAG
[ENA]
¢þ
>WENV183392425
OLZE01005844
[OLZE] human gut metagenome; feces
707
783
+
Leu
TAG
[ENA]
¢þ
>WENV183402190
OLZU01015719
[OLZU] human gut metagenome; feces
731
807
+
Leu
TAG
[ENA]
¢þ
>WENV183420768
OMBA01026701
[OMBA] human gut metagenome; feces
734
810
+
Leu
TAG
[ENA]
¢þ
>WENV183435738
OMCA01053172
[OMCA] human gut metagenome; feces
139
215
+
Leu
TAG
[ENA]
¢þ
>WENV183441149
OMCH01020433
[OMCH] human gut metagenome; feces
1024
1100
+
Leu
TAG
[ENA]
¢þ
>WENV183453190
OMDD01010016
[OMDD] human gut metagenome; feces
962
886
-
Leu
TAG
[ENA]
¢þ
>WENV183480828
OMFJ01005912
[OMFJ] human gut metagenome; feces
857
933
+
Leu
TAG
[ENA]
¢þ
>WENV183488407
OMFY01026144
[OMFY] human gut metagenome; feces
220
144
-
Leu
TAG
[ENA]
¢þ
>WENV183497512
OMGN01005344
[OMGN] human gut metagenome; feces
792
868
+
Leu
TAG
[ENA]
¢þ
>WENV170028484
CDYF01001482
[CDYF] gut metagenome; human stools
460
536
+
Leu
TAG
[ENA]
¢þ
>WENV170032391
CDYK01001888
[CDYK] gut metagenome; human stools
2960
2884
-
Leu
TAG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK