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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.211412 (3 seq.)
>W1511599786
LBSU01000006
Unclassified
Microgenomates group bacterium GW2011_GWC1_37_12b GW2011_GWC1_37_12b [LBSU]
16717
16793
+
Val
CAC
[ENA]
¡û
>W1511600456
LBTR01000040
Unclassified
Candidatus Woesebacteria bacterium GW2011_GWA1_37_8 bacterium GW2011_GWA1_37_8 [LBTR]
5801
5877
+
Val
CAC
[ENA]
¡û
>W1511601899
LBVN01000007
Unclassified
Candidatus Woesebacteria bacterium GW2011_GWB1_38_8b bacterium GW2011_GWB1_38_8b [LBVN]
46411
46487
+
Val
CAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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