This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.228397 (6 seq.)
>WENV180209993
OBAL01060070
[OBAL] marine metagenome; ENVO:00002019, 'BRACKISH WATER
282
206
-
Ile2
CAT
[ENA]
¡û
>C191160540
CP038493
Gammaproteobacteria
Thalassotalea sp. HSM 43 [CP038493]
1141456
1141532
+
Met
CAT
-
¡û
>W2010588316
JABBXH010000003
Gammaproteobacteria
Thalassotalea sp. M1531 [JABBXH]
494957
494881
-
Ile2
CAT
[ENA]
¡û
>W2011639093
SMNZ01000007
Gammaproteobacteria
Alteromonadaceae bacterium M269 [SMNZ]
71746
71822
+
Ile2
CAT
[ENA]
¡û
>W2011970818
VCBC01000003
Gammaproteobacteria
Thalassotalea litorea MCCC 1K03283 [VCBC]
213093
213017
-
Ile2
CAT
[ENA]
¡û
>W1511322736
JQDZ01000112
Gammaproteobacteria
Thalassotalea sp. ND16A [JQDZ]
85503
85427
-
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK