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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.235390 (82 seq.)
>W1710872032
LMLR01000010
Actinomycetota
Arthrobacter sp. Leaf69 [LMLR]
468796
468723
-
Lys
TTT
[ENA]
¡û
>W1710875536
LMOL01000045
Actinomycetota
Arthrobacter sp. Leaf141 [LMOL]
137097
137022
-
Lys
TTT
[ENA]
¡û
>W1710875608
LMON01000005
Actinomycetota
Arthrobacter sp. Leaf145 [LMON]
27294
27219
-
Lys
TTT
[ENA]
¡û
>W1710876297
LMPC01000012
Actinomycetota
Arthrobacter sp. Leaf337 [LMPC]
565237
565164
-
Lys
TTT
[ENA]
¡û
>W1710880045
LMSB01000034
Actinomycetota
Arthrobacter sp. Soil736 [LMSB]
454959
454886
-
Lys
TTT
[ENA]
¡û
>W1710880327
LMSG01000020
Actinomycetota
Arthrobacter sp. Soil762 [LMSG]
283264
283339
+
Lys
TTT
[ENA]
¡û
>W1710880349
LMSH01000001
Actinomycetota
Arthrobacter sp. Soil763 [LMSH]
392079
392006
-
Lys
TTT
[ENA]
¡û
>W1710880732
LMSO01000001
Actinomycetota
Arthrobacter sp. Soil782 [LMSO]
1173445
1173521
+
Lys
TTT
[ENA]
¡û
>W1710916219
LNUV01000006
Actinomycetota
Arthrobacter sp. EpRS71 [LNUV]
704223
704298
+
Lys
TTT
[ENA]
¡û
>W1711724075
MTPV01000040
Actinomycetota
Arthrobacter sp. SRS-W-1-2016 [MTPV]
50152
50077
-
Lys
TTT
[ENA]
¡û
>W1711768817
MVDG01000032
Actinomycetota
Arthrobacter sp. KBS0703 [MVDG]
51446
51373
-
Lys
TTT
[ENA]
¡û
>W1711853233
MYFE01000347
Actinomycetota
Arthrobacter globiformis [MYFE]
24252
24179
-
Lys
TTT
[ENA]
¡û
>C171092013
CP019304
Actinomycetota
Arthrobacter sp. QXT-31 [CP019304]
1886488
1886415
-
Lys
TTT
-
¡û
>W131172208
ARGT01000018
Actinomycetota
Arthrobacter sp. 131MFCol6.1 [ARGT]
97895
97822
-
Lys
TTT
[ENA]
¡û
>W131172250
ARGU01000017
Actinomycetota
Arthrobacter sp. 161MFSha2.1 [ARGU]
25658
25583
-
Lys
TTT
[ENA]
¡û
>W131237712
AUPJ01000189
Actinomycetota
Arthrobacter sp. TB 26 [AUPJ]
490
415
-
Lys
TTT
[ENA]
¡û
>C000047
CP000474
Actinomycetota
Paenarthrobacter aurescens TC1 [CP000474]
209827
209902
+
Lys
TTT
[Ensembl]
¡û
>C000987
CP000454
Actinomycetota
Arthrobacter sp. FB24 [CP000454]
218923
218995
+
Lys
TTT
[Ensembl]
¡û
>WENV180018460
FSZH01000483
[FSZH] metagenome; soil
2860
2786
-
Lys
TTT
[ENA]
¢þ
>WENV180019639
FTCF01000146
[FTCF] metagenome; soil
12258
12332
+
Lys
TTT
[ENA]
¢þ
>W141066021
AQRI01000020
Actinomycetota
Arthrobacter sp. MA-N2 [AQRI]
69281
69356
+
Lys
TTT
[ENA]
¡û
>WENV180693187
OCZS011064754
[OCZS] soil metagenome; soil
217
144
-
Lys
TTT
[ENA]
¢þ
>W141106062
AVPD01000003
Actinomycetota
Arthrobacter sp. AK-YN10 [AVPD]
266572
266497
-
Lys
TTT
[ENA]
¡û
>W141203195
AZHY01000272
Actinomycetota
Arthrobacter sp. 35/47 [AZHY]
559
484
-
Lys
TTT
[ENA]
¡û
>W141213526
AZSB01000341
Actinomycetota
Arthrobacter sp. I3 [AZSB]
14196
14123
-
Lys
TTT
[ENA]
¡û
>W141216735
AZVC01000011
Actinomycetota
Paenarthrobacter nicotinovorans 231Sha2.1M6 [AZVC]
63311
63386
+
Lys
TTT
[ENA]
¡û
>W141217161
AZVJ01000017
Actinomycetota
Paenarthrobacter nicotinovorans 26Cvi1.1E [AZVJ]
52252
52327
+
Lys
TTT
[ENA]
¡û
>W141278857
JAFW01000001
Actinomycetota
Arthrobacter sp. 31Y [JAFW]
2645987
2646062
+
Lys
TTT
[ENA]
¡û
>C181000297
AP014718
Actinomycetota
Arthrobacter sp. Hiyo4 [AP014718]
277101
277175
+
Lys
TTT
-
¡û
>C181064952
CP022436
Actinomycetota
Arthrobacter sp. YN [CP022436]
251779
251853
+
Lys
TTT
-
¡û
>C191164656
CP039290
Actinomycetota
Arthrobacter sp. PAMC25564 [CP039290]
427518
427445
-
Lys
TTT
-
¡û
>C191174039
CP040018
Actinomycetota
Arthrobacter sp. 24S4-2 [CP040018]
215858
215931
+
Lys
TTT
-
¡û
>C191188264
CP041188
Actinomycetota
Pseudarthrobacter sp. NIBRBAC000502772 [CP041188]
859484
859558
+
Lys
TTT
-
¡û
>W141565179
JIBJ01000002
Actinomycetota
Arthrobacter sp. 9MFCol3.1 [JIBJ]
403609
403536
-
Lys
TTT
[ENA]
¡û
>W09102033
AAHG01000002
Actinomycetota
Arthrobacter sp. FB24 [AAHG]
94468
94395
-
Lys
TTT
[ENA]
¡û
>W141702007
JMLE01000006
Actinomycetota
Arthrobacter sp. UNC362MFTsu5.1 [JMLE]
170929
171002
+
Lys
TTT
[ENA]
¡û
>W1910181580
BJMD01000010
Actinomycetota
Paenarthrobacter aurescens NBRC 12136 [BJMD]
49815
49889
+
Lys
TTT
[ENA]
¡û
>W1911532703
OIVI01000028
Actinomycetota
Arthrobacter alpinus [OIVI]
22800
22873
+
Lys
TTT
[ENA]
¡û
>W1911532718
OIVI01000175
Actinomycetota
Arthrobacter alpinus [OIVI]
21587
21660
+
Lys
TTT
[ENA]
¡û
>W1911566817
PCPC01000023
Actinomycetota
Arthrobacter sp. MYb51 [PCPC]
46407
46481
+
Lys
TTT
[ENA]
¡û
>W1911567592
PCPR01000026
Actinomycetota
Arthrobacter sp. MYb23 [PCPR]
46407
46481
+
Lys
TTT
[ENA]
¡û
>W1911798252
QYLP01000067
Actinomycetota
Arthrobacter celericrescens NEAU-SA2 [QYLP]
1318
1244
-
Lys
TTT
[ENA]
¡û
>W1810167345
PJIK01000009
Actinomycetota
Arthrobacter sp. ZGTC131 [PJIK]
146985
147058
+
Lys
TTT
[ENA]
¡û
>W1810167419
PJIL01000029
Actinomycetota
Arthrobacter sp. Y81 [PJIL]
25488
25561
+
Lys
TTT
[ENA]
¡û
>W1810167943
PJIW01000017
Actinomycetota
Arthrobacter sp. 4R501 [PJIW]
98208
98134
-
Lys
TTT
[ENA]
¡û
>W1810172017
PJMC01000009
Actinomycetota
Arthrobacter sp. AFG20 [PJMC]
3120
3193
+
Lys
TTT
[ENA]
¡û
>W1810424164
PYUI01000002
Actinomycetota
Arthrobacter sp. H-02-3 LBUM149 [PYUI]
154512
154585
+
Lys
TTT
[ENA]
¡û
>W1810676826
QKMG01000013
Actinomycetota
Paenarthrobacter nicotinovorans 25_8 [QKMG]
40848
40922
+
Lys
TTT
[ENA]
¡û
>W1810695548
QLNP01000064
Actinomycetota
Arthrobacter globiformis mrc11 [QLNP]
73483
73556
+
Lys
TTT
[ENA]
¡û
>W1810707046
QMKP01000005
Actinomycetota
Arthrobacter sp. AQ5-06 [QMKP]
133165
133091
-
Lys
TTT
[ENA]
¡û
>W1510018547
BBUE01000346
Actinomycetota
Arthrobacter sp. Hiyo6 [BBUE]
250
323
+
Lys
TTT
[ENA]
¡û
>W1510641738
CVLG01000001
Actinomycetota
Paenarthrobacter nitroguajacolicus HG [CVLG]
605536
605611
+
Lys
TTT
[ENA]
¡û
>W1511319601
JPZK01000007
Actinomycetota
Arthrobacter sp. MWB30 [JPZK]
3840
3915
+
Lys
TTT
[ENA]
¡û
>W1511523701
JYCN01000001
Actinomycetota
Arthrobacter sp. SPG23 [JYCN]
142433
142506
+
Lys
TTT
[ENA]
¡û
>W1511685669
LFQH01000014
Actinomycetota
Arthrobacter sp. ZBG10 [LFQH]
19631
19706
+
Lys
TTT
[ENA]
¡û
>W11176749
AFXQ01000005
Actinomycetota
Citricoccus sp. CH26A [AFXQ]
123034
122959
-
Lys
TTT
[ENA]
¡û
>C161001337
AP014719
Actinomycetota
Arthrobacter sp. Hiyo8 [AP014719]
2332468
2332393
-
Lys
TTT
-
¡û
>C161060747
CP013747
Actinomycetota
Pseudarthrobacter sulfonivorans Ar51 [CP013747]
1943152
1943077
-
Lys
TTT
[Ensembl]
¡û
>W121086795
AKKK01000001
Actinomycetota
Arthrobacter sp. M2012083 [AKKK]
36681
36756
+
Lys
TTT
[ENA]
¡û
>W121123791
BAEG01000027
Actinomycetota
Arthrobacter globiformis NBRC 12137 [BAEG]
178877
178804
-
Lys
TTT
[ENA]
¡û
>W1610081911
BDDW01000019
Actinomycetota
Paenarthrobacter nicotinovorans [BDDW]
22999
22924
-
Lys
TTT
[ENA]
¡û
>C131002296
CP003203
Actinomycetota
Arthrobacter sp. Rue61a [CP003203]
209925
210000
+
Lys
TTT
[Ensembl]
¡û
>W1610734378
LMLR01000010
Actinomycetota
Arthrobacter sp. Leaf69 [LMLR]
468796
468723
-
Lys
TTT
[ENA]
¡û
>W1610737882
LMOL01000045
Actinomycetota
Arthrobacter sp. Leaf141 [LMOL]
137097
137022
-
Lys
TTT
[ENA]
¡û
>W1610737954
LMON01000005
Actinomycetota
Arthrobacter sp. Leaf145 [LMON]
27294
27219
-
Lys
TTT
[ENA]
¡û
>W1610738643
LMPC01000012
Actinomycetota
Arthrobacter sp. Leaf337 [LMPC]
565237
565164
-
Lys
TTT
[ENA]
¡û
>W1610742391
LMSB01000034
Actinomycetota
Arthrobacter sp. Soil736 [LMSB]
454959
454886
-
Lys
TTT
[ENA]
¡û
>W1610742673
LMSG01000020
Actinomycetota
Arthrobacter sp. Soil762 [LMSG]
283264
283339
+
Lys
TTT
[ENA]
¡û
>W1610742695
LMSH01000001
Actinomycetota
Arthrobacter sp. Soil763 [LMSH]
392079
392006
-
Lys
TTT
[ENA]
¡û
>W1610743078
LMSO01000001
Actinomycetota
Arthrobacter sp. Soil782 [LMSO]
1173445
1173521
+
Lys
TTT
[ENA]
¡û
>W1610774458
LNUV01000006
Actinomycetota
Arthrobacter sp. EpRS71 [LNUV]
704223
704298
+
Lys
TTT
[ENA]
¡û
>W1710080626
BDDW01000019
Actinomycetota
Paenarthrobacter nicotinovorans [BDDW]
22999
22924
-
Lys
TTT
[ENA]
¡û
>W1710508514
FMWE01000005
Actinomycetota
Arthrobacter sp. UNCCL28 [FMWE]
1425
1500
+
Lys
TTT
[ENA]
¡û
>W1710518052
FNDT01000007
Actinomycetota
Arthrobacter subterraneus [FNDT]
2978
2902
-
Lys
TTT
[ENA]
¡û
>W1710521084
FNGC01000009
Actinomycetota
Arthrobacter sp. ok362 [FNGC]
211442
211369
-
Lys
TTT
[ENA]
¡û
>W1710521124
FNGD01000005
Actinomycetota
Arthrobacter sp. ov407 [FNGD]
30824
30897
+
Lys
TTT
[ENA]
¡û
>W1710525656
FNJS01000004
Actinomycetota
Arthrobacter sp. ok909 [FNJS]
35094
35167
+
Lys
TTT
[ENA]
¡û
>W1710529028
FNNR01000010
Actinomycetota
Arthrobacter sp. cf158 [FNNR]
41471
41546
+
Lys
TTT
[ENA]
¡û
>W1710541448
FNYI01000006
Actinomycetota
Arthrobacter sp. yr096 [FNYI]
272807
272732
-
Lys
TTT
[ENA]
¡û
>W1710577628
FPAY01000003
Actinomycetota
Arthrobacter sp. ov118 [FPAY]
417965
417892
-
Lys
TTT
[ENA]
¡û
>W1710603459
FUZB01000017
Actinomycetota
Arthrobacter sp. 31Cvi3.1E [FUZB]
39745
39820
+
Lys
TTT
[ENA]
¡û
>W1710603516
FUZD01000006
Actinomycetota
Arthrobacter sp. 49Tsu3.1M3 [FUZD]
30202
30275
+
Lys
TTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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