tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.23718 (82 seq.)
>W1710852532 LLVU01000034 Alphaproteobacteria Rhodobacter capsulatus [LLVU] 197845 197934 + Ser GGA [ENA] ¡û
>W1710852559 LLVV01000007 Alphaproteobacteria Rhodobacter capsulatus [LLVV] 31844 31933 + Ser GGA [ENA] ¡û
>W1710853427 LLWQ01000217 Alphaproteobacteria Paracoccus sp. MKU1 [LLWQ] 1855 1766 - Ser GGA [ENA] ¡û
>W1710889757 LNBC01000030 Alphaproteobacteria Paracoccus aminovorans [LNBC] 123451 123540 + Ser GGA [ENA] ¡û
>W1711135092 LUYN01000070 Alphaproteobacteria Rhodobacterales bacterium Alpha_01 [LUYN] 742 653 - Ser GGA [ENA] ¡û
>W1712104736 NIPZ01000003 Alphaproteobacteria Paracoccus yeei [NIPZ] 3404 3493 + Ser GGA [ENA] ¡û
>C171067771 CP017781 Alphaproteobacteria Rhodobacter sp. LPB0142 [CP017781] 1717968 1718057 + Ser GGA - ¡û
>C171107693 CP020442 Alphaproteobacteria Paracoccus yeei FDAARGOS_252 [CP020442] 675871 675782 - Ser GGA - ¡û
>C171110798 CP020612 Alphaproteobacteria Paracoccus contaminans RKI 16-01929T [CP020612] 72716 72627 - Ser GGA - ¡û
>W131158919 AQUO01000001 Alphaproteobacteria Paracoccus sp. N5 [AQUO] 637412 637323 - Ser GGA [ENA] ¡û
>C016012 CP000489 Alphaproteobacteria Paracoccus denitrificans PD1222 [CP000489, CP000490] 948593 948682 + Ser GGA [Ensembl] ¡û
>W141191583 AYPR01000034 Alphaproteobacteria Rhodobacter capsulatus DE442 [AYPR] 41851 41762 - Ser GGA [ENA] ¡û
>W141191718 AYPY01000024 Alphaproteobacteria Rhodobacter capsulatus YW1 [AYPY] 227802 227891 + Ser GGA [ENA] ¡û
>W141191773 AYPZ01000040 Alphaproteobacteria Rhodobacter capsulatus YW2 [AYPZ] 41106 41017 - Ser GGA [ENA] ¡û
>W141191796 AYQA01000002 Alphaproteobacteria Rhodobacter capsulatus B6 [AYQA] 7000 6911 - Ser GGA [ENA] ¡û
>W141191875 AYQB01000039 Alphaproteobacteria Rhodobacter capsulatus Y262 [AYQB] 41890 41801 - Ser GGA [ENA] ¡û
>W141191922 AYQC01000030 Alphaproteobacteria Rhodobacter capsulatus R121 [AYQC] 41890 41801 - Ser GGA [ENA] ¡û
>W141216624 AZVA01000005 Alphaproteobacteria Paracoccus sp. J55 [AZVA] 173424 173513 + Ser GGA [ENA] ¡û
>W141277320 JAEM01000043 Alphaproteobacteria Paracoccus pantotrophus J46 [JAEM] 9893 9804 - Ser GGA [ENA] ¡û
>W141277354 JAEN01000009 Alphaproteobacteria Paracoccus sp. J39 [JAEN] 39037 39126 + Ser GGA [ENA] ¡û
>W141279584 JAGK01000020 Alphaproteobacteria Paracoccus pantotrophus J40 [JAGK] 24162 24073 - Ser GGA [ENA] ¡û
>WENV183729327 PJTQ01022258 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 760 849 + Ser GGA [ENA] ¢þ
>WENV170564883 CZPY01000030 [CZPY] metagenome; PAHs-polluted Soil 123451 123540 + Ser GGA [ENA] ¢þ
>PL191000041 CP000489 Alphaproteobacteria Paracoccus denitrificans PD1222 plasmid:phage/plasmid primase, P4 family (CP000489) 948593 948682 + Ser GGA [Ensembl] ¡û
>W141485046 JFZB01000031 Alphaproteobacteria Paenirhodobacter enshiensis [JFZB] 43159 43248 + Ser GGA [ENA] ¡û
>C181099810 CP024422 Alphaproteobacteria Paracoccus yeei TT13 [CP024422] 181238 181149 - Ser GGA - ¡û
>C181119687 CP025583 Alphaproteobacteria Paracoccus jeotgali CBA4604 [CP025583] 1377143 1377054 - Ser GGA - ¡û
>C181190855 CP030239 Alphaproteobacteria Paracoccus mutanolyticus RSP-02 [CP030239] 669323 669234 - Ser GGA - ¡û
>C181203413 LN832559 Alphaproteobacteria Paracoccus aminovorans [LN832559] 2296258 2296169 - Ser GGA - ¡û
>C191073598 CP031078 Alphaproteobacteria Paracoccus yeei CCUG 32053 [CP031078] 2184486 2184397 - Ser GGA - ¡û
>W09103073 AAIT01000027 Alphaproteobacteria Paracoccus denitrificans PD1222 [AAIT] 22635 22546 - Ser GGA [ENA] ¡û
>C191134383 CP035090 Alphaproteobacteria Paracoccus denitrificans ATCC 19367 [CP035090, CP035091] 2542992 2543081 + Ser GGA - ¡û
>W141558887 JHWH01000038 Alphaproteobacteria Paracoccus yeei ATCC BAA-599 [JHWH] 15933 16022 + Ser GGA [ENA] ¡û
>W1911245319 NSJZ01000002 Alphaproteobacteria Paracoccus salipaludis WN007 [NSJZ] 324211 324300 + Ser GGA [ENA] ¡û
>W1911283653 NTJD01000010 Alphaproteobacteria Pseudothioclava arenosa CAU 1312 [NTJD] 43076 42987 - Ser GGA [ENA] ¡û
>W1911495123 OBMP01000006 Alphaproteobacteria Rhodobacter sp. JA431 [OBMP] 228459 228548 + Ser GGA [ENA] ¡û
>W1911495380 OBMT01000018 Alphaproteobacteria Rhodobacter maris JA276 [OBMT] 52798 52887 + Ser GGA [ENA] ¡û
>W1810236002 PPGA01000025 Alphaproteobacteria Paracoccus denitrificans ISTOD1 [PPGA] 18036 18125 + Ser GGA [ENA] ¡û
>W1810268894 PRDS01000003 Alphaproteobacteria Albidovulum inexpectatum DSM 12048 [PRDS] 288414 288503 + Ser GGA [ENA] ¡û
>W1810486269 QAXT01000007 Alphaproteobacteria Rhodobacter aestuarii JA296 [QAXT] 227044 227133 + Ser GGA [ENA] ¡û
>W1810585305 QFCQ01000008 Alphaproteobacteria Paracoccus thiocyanatus SST [QFCQ] 3442 3531 + Ser GGA [ENA] ¡û
>W1810672436 QJTK01000014 Alphaproteobacteria Rhodobacter viridis JA737 [QJTK] 6915 6826 - Ser GGA [ENA] ¡û
>W1810685798 QKZO01000001 Alphaproteobacteria Rhodobacter capsulatus DSM 1710 [QKZO] 178872 178783 - Ser GGA [ENA] ¡û
>W1810697115 QLUV01000003 Alphaproteobacteria Paracoccus endophyticus SYSUP0003 [QLUV] 37662 37573 - Ser GGA [ENA] ¡û
>W1810721633 QNSD01000009 Alphaproteobacteria Rhodobacter sp. 140A [QNSD] 31989 31900 - Ser GGA [ENA] ¡û
>W1810750729 QOZU01000005 Alphaproteobacteria Paracoccus pantotrophus KS1 [QOZU] 34731 34642 - Ser GGA [ENA] ¡û
>W1810762340 QPML01000104 Alphaproteobacteria Paracoccus versutus MAL 1HM19 [QPML] 11472 11383 - Ser GGA [ENA] ¡û
>W1810862253 QTUJ01000002 Alphaproteobacteria Paracoccus versutus DSM 17099 [QTUJ] 908029 908118 + Ser GGA [ENA] ¡û
>W1810884843 QUMX01000005 Alphaproteobacteria Paracoccus versutus DSM 582 [QUMX] 28061 28150 + Ser GGA [ENA] ¡û
>C10110632 CP001312 Alphaproteobacteria Rhodobacter capsulatus SB 1003 [CP001312] 3142137 3142048 - Ser GGA [Ensembl] ¡û
>C11117031 CP002897 Alphaproteobacteria Paracoccus denitrificans [CP002897] 755260 755349 + Ser GGA [Ensembl] ¡û
>W1511348575 JRKN01000048 Alphaproteobacteria Paracoccus halophilus JCM 14014 [JRKN] 14676 14765 + Ser GGA [ENA] ¡û
>W1511348594 JRKO01000007 Alphaproteobacteria Paracoccus versutus DSM 582 [JRKO] 108658 108569 - Ser GGA [ENA] ¡û
>W1511348641 JRKP01000012 Alphaproteobacteria Paracoccus sanguinis 39524 [JRKP] 20358 20447 + Ser GGA [ENA] ¡û
>W1511348689 JRKQ01000024 Alphaproteobacteria Paracoccus sanguinis 5503 [JRKQ] 8323 8412 + Ser GGA [ENA] ¡û
>W1511348757 JRKR01000131 Alphaproteobacteria Paracoccus sanguinis 10990 [JRKR] 7686 7775 + Ser GGA [ENA] ¡û
>W1511348766 JRKS01000001 Alphaproteobacteria Paracoccus sphaerophysae HAMBI 3106 [JRKS] 166160 166249 + Ser GGA [ENA] ¡û
>W1511348838 JRKT01000052 Alphaproteobacteria Paracoccus sanguinis 4681 [JRKT] 14295 14206 - Ser GGA [ENA] ¡û
>W11143062 AEPN01000058 Alphaproteobacteria Paracoccus sp. TRP [AEPN] 3681 3592 - Ser GGA [ENA] ¡û
>W1610049828 BBFH01000159 Alphaproteobacteria Paracoccus denitrificans JCM 21484 [BBFH] 2948 3037 + Ser GGA [ENA] ¡û
>W1610081507 BDDO01000026 Alphaproteobacteria Paenirhodobacter sp. MME-103 [BDDO] 33970 34059 + Ser GGA [ENA] ¡û
>WENV070726 AACY023820233 Marine microbial communities from Global Ocean Sampling (GOS) 342 251 - Ser GGA [ENA]
>W1610715671 LLVU01000034 Alphaproteobacteria Rhodobacter capsulatus [LLVU] 197845 197934 + Ser GGA [ENA] ¡û
>W1610715698 LLVV01000007 Alphaproteobacteria Rhodobacter capsulatus [LLVV] 31844 31933 + Ser GGA [ENA] ¡û
>W1610716551 LLWQ01000217 Alphaproteobacteria Paracoccus sp. MKU1 [LLWQ] 1855 1766 - Ser GGA [ENA] ¡û
>W1610750135 LNBC01000030 Alphaproteobacteria Paracoccus aminovorans [LNBC] 123451 123540 + Ser GGA [ENA] ¡û
>W1610946212 LUYN01000070 Alphaproteobacteria Rhodobacterales bacterium Alpha_01 [LUYN] 742 653 - Ser GGA [ENA] ¡û
>W1710046227 BBFH01000159 Alphaproteobacteria Paracoccus denitrificans JCM 21484 [BBFH] 2948 3037 + Ser GGA [ENA] ¡û
>W1710080158 BDDO01000026 Alphaproteobacteria Paenirhodobacter sp. MME-103 [BDDO] 33970 34059 + Ser GGA [ENA] ¡û
>W1710513620 FNAH01000005 Alphaproteobacteria Paracoccus isoporae [FNAH] 216237 216326 + Ser GGA [ENA] ¡û
>W1710514467 FNAY01000014 Alphaproteobacteria Rhodobacter capsulatus [FNAY] 5142 5053 - Ser GGA [ENA] ¡û
>W1710518480 FNEA01000044 Alphaproteobacteria Paracoccus denitrificans [FNEA] 21731 21820 + Ser GGA [ENA] ¡û
>W1710521172 FNGE01000005 Alphaproteobacteria Paracoccus chinensis [FNGE] 2348 2259 - Ser GGA [ENA] ¡û
>W1710528221 FNNA01000003 Alphaproteobacteria Paracoccus sanguinis [FNNA] 20326 20415 + Ser GGA [ENA] ¡û
>W1710555571 FOJO01000045 Alphaproteobacteria Paracoccus halophilus [FOJO] 1518 1429 - Ser GGA [ENA] ¡û
>W1710563592 FOPU01000023 Alphaproteobacteria Paracoccus aminovorans [FOPU] 55259 55348 + Ser GGA [ENA] ¡û
>W1710571587 FOWA01000066 Alphaproteobacteria Paracoccus pantotrophus [FOWA] 690 601 - Ser GGA [ENA] ¡û
>W1710574701 FOYK01000044 Alphaproteobacteria Paracoccus denitrificans [FOYK] 5822 5733 - Ser GGA [ENA] ¡û
>W1710581766 FPKI01000010 Alphaproteobacteria Paracoccus pantotrophus [FPKI] 14316 14227 - Ser GGA [ENA] ¡û
>W1710596189 FTMK01000007 Alphaproteobacteria Paracoccus thiocyanatus [FTMK] 108937 108848 - Ser GGA [ENA] ¡û
>W1710598829 FTOG01000008 Alphaproteobacteria Rhodobacter aestuarii [FTOG] 8728 8639 - Ser GGA [ENA] ¡û
>W1710608136 FXAQ01000044 Alphaproteobacteria Paracoccus sp. J56 [FXAQ] 13686 13775 + Ser GGA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK