tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.237295 (142 seq.)
>W131205821 ATFC01000013 Spirochaetota Treponema vincentii F0403 [ATFC] 13399 13325 - Phe GAA [ENA] ¡û
>W131205865 ATFE01000001 Spirochaetota Treponema medium ATCC 700293 [ATFE] 181273 181347 + Phe GAA [ENA] ¡û
>W131000363 AGEB01000011 Spirochaetota Treponema denticola US-Trep [AGEB] 6271 6344 + Phe GAA [ENA] ¡û
>W131003035 AHAB01000002 Spirochaetota Treponema denticola SP23 [AHAB] 509887 509960 + Phe GAA [ENA] ¡û
>W131003103 AHAC01000021 Spirochaetota Treponema denticola SP32 [AHAC] 27812 27739 - Phe GAA [ENA] ¡û
>W131003152 AHAD01000010 Spirochaetota Treponema denticola SP44 [AHAD] 27735 27808 + Phe GAA [ENA] ¡û
>C025475 AE017226 Spirochaetota Treponema denticola ATCC 35405 [AE017226] 1789641 1789713 + Phe GAA [Ensembl] ¡û
>C025744 AE000520 Spirochaetota Treponema pallidum subsp. pallidum str. Nichols [AE000520] 697680 697752 + Phe GAA [Ensembl] ¡û
>W141005314 AGDQ01000001 Spirochaetota Treponema denticola AL-2 [AGDQ] 60849 60776 - Phe GAA [ENA] ¡û
>W141005393 AGDR01000040 Spirochaetota Treponema denticola ASLM [AGDR] 158887 158960 + Phe GAA [ENA] ¡û
>W141005425 AGDS01000012 Spirochaetota Treponema denticola ATCC 33520 [AGDS] 98403 98330 - Phe GAA [ENA] ¡û
>W141005471 AGDT01000017 Spirochaetota Treponema denticola ATCC 33521 [AGDT] 15954 15881 - Phe GAA [ENA] ¡û
>W141005491 AGDU01000004 Spirochaetota Treponema denticola ATCC 35404 [AGDU] 175649 175722 + Phe GAA [ENA] ¡û
>W141005535 AGDV01000004 Spirochaetota Treponema denticola H-22 [AGDV] 25520 25593 + Phe GAA [ENA] ¡û
>W141005598 AGDW01000019 Spirochaetota Treponema denticola H1-T [AGDW] 61969 61896 - Phe GAA [ENA] ¡û
>W141005639 AGDX01000008 Spirochaetota Treponema denticola MYR-T [AGDX] 71086 71013 - Phe GAA [ENA] ¡û
>W141005658 AGDY01000001 Spirochaetota Treponema denticola OTK [AGDY] 177413 177486 + Phe GAA [ENA] ¡û
>W141005734 AGDZ01000028 Spirochaetota Treponema denticola SP33 [AGDZ] 477621 477694 + Phe GAA [ENA] ¡û
>W141005777 AGEA01000019 Spirochaetota Treponema denticola SP37 [AGEA] 27723 27796 + Phe GAA [ENA] ¡û
>W141055898 AOTM01000045 Spirochaetota Treponema pedis str. T M1 [AOTM] 40086 40012 - Phe GAA [ENA] ¡û
>W141055964 AOTN01000281 Spirochaetota Treponema pedis str. B 683 [AOTN] 2672 2746 + Phe GAA [ENA] ¡û
>W141055978 AOTO01000173 Spirochaetota Treponema pedis isoM1111 [AOTO] 19 93 + Phe GAA [ENA] ¡û
>W141056011 AOTP01000016 Spirochaetota Treponema pedis isoE1186 [AOTP] 21190 21264 + Phe GAA [ENA] ¡û
>W141056070 AOTQ01000119 Spirochaetota Treponema pedis isoM1220 [AOTQ] 7560 7634 + Phe GAA [ENA] ¡û
>W141056144 AOTR01000486 Spirochaetota Treponema pedis isoM1224 [AOTR] 132 206 + Phe GAA [ENA] ¡û
>W141064677 AQCF01000031 Spirochaetota Treponema phagedenis 4A [AQCF] 15208 15282 + Phe GAA [ENA] ¡û
>WENV180709268 ODFJ01043027 [ODFJ] human metagenome; G_DNA_Tongue dorsum 567 493 - Phe GAA [ENA] ¢þ
>WENV180721594 ODGL01002849 [ODGL] human metagenome; G_DNA_Subgingival plaque 1614 1542 - Phe GAA [ENA] ¢þ
>WENV180727369 ODGU01004630 [ODGU] human metagenome; G_DNA_Supragingival plaque 4294 4368 + Phe GAA [ENA] ¢þ
>WENV180728143 ODGU01027304 [ODGU] human metagenome; G_DNA_Supragingival plaque 469 395 - Phe GAA [ENA] ¢þ
>WENV180729331 ODGU01338357 [ODGU] human metagenome; G_DNA_Supragingival plaque 10 84 + Phe GAA [ENA] ¢þ
>WENV180734575 ODGZ01013335 [ODGZ] human metagenome; G_DNA_Supragingival plaque 135 63 - Phe GAA [ENA] ¢þ
>WENV180750100 ODHS01000447 [ODHS] human metagenome; G_DNA_Supragingival plaque 20252 20178 - Phe GAA [ENA] ¢þ
>WENV180750550 ODHS01003573 [ODHS] human metagenome; G_DNA_Supragingival plaque 871 797 - Phe GAA [ENA] ¢þ
>WENV180767570 ODIG01000197 [ODIG] human metagenome; G_DNA_Tongue dorsum 26784 26712 - Phe GAA [ENA] ¢þ
>WENV180769345 ODIG01057946 [ODIG] human metagenome; G_DNA_Tongue dorsum 642 568 - Phe GAA [ENA] ¢þ
>WENV180788718 ODIS01102943 [ODIS] human metagenome; G_DNA_Supragingival plaque 553 627 + Phe GAA [ENA] ¢þ
>WENV180788905 ODIS01149319 [ODIS] human metagenome; G_DNA_Supragingival plaque 317 389 + Phe GAA [ENA] ¢þ
>WENV180789335 ODIS01464089 [ODIS] human metagenome; G_DNA_Supragingival plaque 74 -1 - Phe GAA [ENA] ¢þ
>WENV180796663 ODJB01009113 [ODJB] human metagenome; G_DNA_Supragingival plaque 1376 1302 - Phe GAA [ENA] ¢þ
>WENV180808082 ODJI01045884 [ODJI] human metagenome; G_DNA_Tongue dorsum 43 115 + Phe GAA [ENA] ¢þ
>WENV180809295 ODJK01010489 [ODJK] human metagenome; G_DNA_Subgingival plaque 305 231 - Phe GAA [ENA] ¢þ
>WENV180810501 ODJK01351966 [ODJK] human metagenome; G_DNA_Subgingival plaque 10 84 + Phe GAA [ENA] ¢þ
>WENV180843395 ODKN01002514 [ODKN] human metagenome; G_DNA_Supragingival plaque 2132 2206 + Phe GAA [ENA] ¢þ
>WENV180843521 ODKN01004258 [ODKN] human metagenome; G_DNA_Supragingival plaque 3588 3662 + Phe GAA [ENA] ¢þ
>WENV180846566 ODKT01014918 [ODKT] human metagenome; G_DNA_Supragingival plaque 2257 2331 + Phe GAA [ENA] ¢þ
>WENV180883342 ODMC01003919 [ODMC] human metagenome; G_DNA_Tongue dorsum 2307 2233 - Phe GAA [ENA] ¢þ
>WENV180924766 ODTK01015103 [ODTK] human metagenome; G_DNA_Supragingival plaque 1427 1501 + Phe GAA [ENA] ¢þ
>WENV180930663 ODTP01000149 [ODTP] human metagenome; G_DNA_Tongue dorsum 41624 41696 + Phe GAA [ENA] ¢þ
>WENV180930921 ODTP01000722 [ODTP] human metagenome; G_DNA_Tongue dorsum 4570 4644 + Phe GAA [ENA] ¢þ
>WENV180938069 ODTX01000529 [ODTX] human metagenome; G_DNA_Supragingival plaque 20249 20175 - Phe GAA [ENA] ¢þ
>WENV180951269 ODUH01014909 [ODUH] human metagenome; G_DNA_Subgingival plaque 1963 2037 + Phe GAA [ENA] ¢þ
>WENV180952399 ODUH01291514 [ODUH] human metagenome; G_DNA_Subgingival plaque 1 73 + Phe GAA [ENA] ¢þ
>WENV180980306 ODVE01000028 [ODVE] human metagenome; G_DNA_Supragingival plaque 60296 60368 + Phe GAA [ENA] ¢þ
>WENV180980405 ODVE01000118 [ODVE] human metagenome; G_DNA_Supragingival plaque 23246 23173 - Phe GAA [ENA] ¢þ
>WENV180981049 ODVE01005815 [ODVE] human metagenome; G_DNA_Supragingival plaque 383 309 - Phe GAA [ENA] ¢þ
>WENV180982362 ODVE01316806 [ODVE] human metagenome; G_DNA_Supragingival plaque 73 1 - Phe GAA [ENA] ¢þ
>WENV180986319 ODVJ01113748 [ODVJ] human metagenome; G_DNA_Tongue dorsum 97 171 + Phe GAA [ENA] ¢þ
>WENV181009265 ODWE01044689 [ODWE] human metagenome; G_DNA_Supragingival plaque 359 285 - Phe GAA [ENA] ¢þ
>WENV181039007 ODXQ01008143 [ODXQ] human metagenome; G_DNA_Tongue dorsum 2776 2704 - Phe GAA [ENA] ¢þ
>WENV181039541 ODXQ01027560 [ODXQ] human metagenome; G_DNA_Tongue dorsum 360 286 - Phe GAA [ENA] ¢þ
>WENV181043740 ODXV01000612 [ODXV] human metagenome; G_DNA_Tongue dorsum 9412 9340 - Phe GAA [ENA] ¢þ
>WENV181050536 ODYD01024676 [ODYD] human metagenome; G_DNA_Supragingival plaque 1156 1230 + Phe GAA [ENA] ¢þ
>WENV181051004 ODYD01139942 [ODYD] human metagenome; G_DNA_Supragingival plaque 283 355 + Phe GAA [ENA] ¢þ
>WENV181068133 ODZI01133790 [ODZI] human metagenome; G_DNA_Supragingival plaque 169 95 - Phe GAA [ENA] ¢þ
>WENV181074241 OEAO01004895 [OEAO] human metagenome; G_DNA_Tongue dorsum 4552 4626 + Phe GAA [ENA] ¢þ
>WENV181076331 OEAP01003892 [OEAP] human metagenome; G_DNA_Supragingival plaque 869 795 - Phe GAA [ENA] ¢þ
>WENV181078782 OEAS01000510 [OEAS] human metagenome; G_DNA_Supragingival plaque 19656 19730 + Phe GAA [ENA] ¢þ
>WENV181079400 OEAS01005847 [OEAS] human metagenome; G_DNA_Supragingival plaque 4224 4150 - Phe GAA [ENA] ¢þ
>WENV181079449 OEAS01006794 [OEAS] human metagenome; G_DNA_Supragingival plaque 514 440 - Phe GAA [ENA] ¢þ
>WENV181079467 OEAS01007113 [OEAS] human metagenome; G_DNA_Supragingival plaque 3526 3600 + Phe GAA [ENA] ¢þ
>WENV181079808 OEAS01015561 [OEAS] human metagenome; G_DNA_Supragingival plaque 702 775 + Phe GAA [ENA] ¢þ
>WENV181080014 OEAS01023023 [OEAS] human metagenome; G_DNA_Supragingival plaque 2551 2477 - Phe GAA [ENA] ¢þ
>WENV181080191 OEAS01032080 [OEAS] human metagenome; G_DNA_Supragingival plaque 484 410 - Phe GAA [ENA] ¢þ
>WENV181080636 OEAS01064307 [OEAS] human metagenome; G_DNA_Supragingival plaque 702 775 + Phe GAA [ENA] ¢þ
>WENV181080657 OEAS01066174 [OEAS] human metagenome; G_DNA_Supragingival plaque 104 176 + Phe GAA [ENA] ¢þ
>WENV181081532 OEAS01249925 [OEAS] human metagenome; G_DNA_Supragingival plaque 5 79 + Phe GAA [ENA] ¢þ
>WENV181084472 OEAV01267557 [OEAV] human metagenome; G_DNA_Supragingival plaque 169 96 - Phe GAA [ENA] ¢þ
>WENV181091181 OEBC01016255 [OEBC] human metagenome; G_DNA_Supragingival plaque 225 151 - Phe GAA [ENA] ¢þ
>WENV181094414 OEBY01000149 [OEBY] human metagenome; G_DNA_Tongue dorsum 16070 15998 - Phe GAA [ENA] ¢þ
>WENV181096054 OEBY01045448 [OEBY] human metagenome; G_DNA_Tongue dorsum 182 256 + Phe GAA [ENA] ¢þ
>WENV181096152 OEBY01060320 [OEBY] human metagenome; G_DNA_Tongue dorsum 387 313 - Phe GAA [ENA] ¢þ
>WENV181105435 OEED01004370 [OEED] human metagenome; G_DNA_Tongue dorsum 4394 4468 + Phe GAA [ENA] ¢þ
>WENV181139153 OEGN01003599 [OEGN] human metagenome; G_DNA_Tongue dorsum 4610 4684 + Phe GAA [ENA] ¢þ
>WENV181147050 OEHQ01098462 [OEHQ] human metagenome; G_DNA_Supragingival plaque 219 145 - Phe GAA [ENA] ¢þ
>WENV181151321 OEHW01037733 [OEHW] human metagenome; G_DNA_Tongue dorsum 30 102 + Phe GAA [ENA] ¢þ
>WENV181152441 OEIA01001492 [OEIA] human metagenome; G_DNA_Supragingival plaque 2683 2757 + Phe GAA [ENA] ¢þ
>WENV181178965 OEJT01000763 [OEJT] human metagenome; G_DNA_Supragingival plaque 12244 12170 - Phe GAA [ENA] ¢þ
>WENV181182936 OEJV01083309 [OEJV] human metagenome; G_DNA_Supragingival plaque 176 102 - Phe GAA [ENA] ¢þ
>WENV183509743 OMHJ01008937 [OMHJ] human oral metagenome; human oral 252 179 - Phe GAA [ENA] ¢þ
>WENV183705928 PDWI01002616 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 50863 50935 + Phe GAA [ENA] ¢þ
>WENV183707986 PDWI01012037 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 6285 6359 + Phe GAA [ENA] ¢þ
>WENV183709691 PDWI01032143 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1406 1334 - Phe GAA [ENA] ¢þ
>WENV183711103 PDWI01061172 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 348 420 + Phe GAA [ENA] ¢þ
>WENV183711218 PDWI01063519 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 123 195 + Phe GAA [ENA] ¢þ
>WENV183711778 PDWI01080063 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 2486 2412 - Phe GAA [ENA] ¢þ
>WENV183712199 PDWI01092082 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1909 1835 - Phe GAA [ENA] ¢þ
>WENV183712821 PDWI01114839 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1320 1394 + Phe GAA [ENA] ¢þ
>WENV183713179 PDWI01128126 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1225 1150 - Phe GAA [ENA] ¢þ
>WENV183713402 PDWI01137151 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1287 1213 - Phe GAA [ENA] ¢þ
>WENV183714212 PDWI01173388 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 1335 1261 - Leu CAA [ENA] ¢þ
>WENV183714508 PDWI01188134 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 930 1002 + Phe GAA [ENA] ¢þ
>WENV183715642 PDWI01252596 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 99 27 - Phe GAA [ENA] ¢þ
>WENV183715833 PDWI01266164 [PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z 72 -1 - Phe GAA [ENA] ¢þ
>WENV183718395 PDWJ01003782 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 9505 9579 + Phe GAA [ENA] ¢þ
>WENV183719614 PDWJ01017169 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 2317 2243 - Phe GAA [ENA] ¢þ
>WENV183721123 PDWJ01055963 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 769 697 - Phe GAA [ENA] ¢þ
>WENV183721318 PDWJ01064169 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 619 691 + Phe GAA [ENA] ¢þ
>WENV183721881 PDWJ01092497 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 68 142 + Phe GAA [ENA] ¢þ
>WENV183722111 PDWJ01106399 [PDWJ] oral metagenome; swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J 1141 1213 + Phe GAA [ENA] ¢þ
>C191179243 CP040555 Spirochaetota Treponema pallidum subsp. pallidum X-4 [CP040555] 699464 699536 + Phe GAA - ¡û
>C141003665 CP004120 Spirochaetota Treponema pedis str. T A4 [CP004120] 1812304 1812378 + Phe GAA [Ensembl] ¡û
>C151004492 CP003679 Spirochaetota Treponema pallidum subsp. pallidum str. Sea 81-4 [CP003679] 698853 698925 + Phe GAA [Ensembl] ¡û
>C151045975 CP009227 Spirochaetota Treponema sp. OMZ 838 [CP009227] 611311 611385 + Phe GAA [Ensembl] ¡û
>C151046031 CP009228 Spirochaetota Treponema putidum OMZ 758 [CP009228] 2176261 2176334 + Phe GAA [Ensembl] ¡û
>W10106167 ACYH01000040 Spirochaetota Treponema vincentii ATCC 35580 [ACYH] 45766 45840 + Phe GAA [ENA] ¡û
>W1510074547 CDNC01000015 Spirochaetota Treponema phagedenis V1 [CDNC] 16789 16715 - Phe GAA [ENA] ¡û
>C10113593 CP001752 Spirochaetota Treponema pallidum subsp. pallidum str. Chicago [CP001752] 698926 698998 + Phe GAA [Ensembl] ¡û
>C10113637 CP000805 Spirochaetota Treponema pallidum subsp. pallidum SS14 [CP000805] 699134 699206 + Phe GAA [Ensembl] ¡û
>W11108490 ACYH01000040 Spirochaetota Treponema vincentii ATCC 35580 [ACYH] 45766 45840 + Phe GAA [ENA] ¡û
>W11115146 ADEC01000014 Spirochaetota Treponema denticola F0402 [ADEC] 556166 556239 + Phe GAA [ENA] ¡û
>C11122903 CP002103 Spirochaetota Treponema paraluiscuniculi Cuniculi A [CP002103] 692542 692614 + Phe GAA [Ensembl] ¡û
>W11135656 AEFH01000135 Spirochaetota Treponema phagedenis F0421 [AEFH] 1262 1336 + Phe GAA [ENA] ¡û
>C121002411 CP002374 Spirochaetota Treponema pallidum subsp. pertenue str. SamoaD [CP002374] 699267 699339 + Phe GAA [Ensembl] ¡û
>C121002456 CP002375 Spirochaetota Treponema pallidum subsp. pertenue str. CDC2 [CP002375] 699721 699793 + Phe GAA [Ensembl] ¡û
>C121002501 CP002376 Spirochaetota Treponema pallidum subsp. pertenue str. Gauthier [CP002376] 699454 699526 + Phe GAA [Ensembl] ¡û
>C121006106 CP003115 Spirochaetota Treponema pallidum subsp. pallidum DAL-1 [CP003115] 699615 699687 + Phe GAA [Ensembl] ¡û
>C161017264 CP007548 Spirochaetota Treponema pallidum subsp. endemicum str. Bosnia A [CP007548] 697254 697326 + Phe GAA [Ensembl] ¡û
>C161028029 CP010558 Spirochaetota Treponema pallidum subsp. pallidum Chicago Population [CP010558] 699153 699225 + Phe GAA - ¡û
>C161028073 CP010559 Spirochaetota Treponema pallidum subsp. pallidum CDC-A [CP010559] 699317 699389 + Phe GAA - ¡û
>C161028117 CP010560 Spirochaetota Treponema pallidum subsp. pallidum Nichols Houston [CP010560] 698069 698141 + Phe GAA - ¡û
>C161028161 CP010561 Spirochaetota Treponema pallidum subsp. pallidum Nichols Houston [CP010561] 699330 699402 + Phe GAA - ¡û
>C161028205 CP010562 Spirochaetota Treponema pallidum subsp. pallidum UW074B [CP010562] 699193 699265 + Phe GAA - ¡û
>C161028249 CP010563 Spirochaetota Treponema pallidum subsp. pallidum UW189B [CP010563] 699412 699484 + Phe GAA - ¡û
>C161028294 CP010564 Spirochaetota Treponema pallidum subsp. pallidum UW228B [CP010564] 699655 699727 + Phe GAA - ¡û
>C161028338 CP010565 Spirochaetota Treponema pallidum subsp. pallidum UW254B [CP010565] 699459 699531 + Phe GAA - ¡û
>C161028382 CP010566 Spirochaetota Treponema pallidum subsp. pallidum UW391B [CP010566] 699398 699470 + Phe GAA - ¡û
>C161084187 CP015162 Spirochaetota Treponema pallidum subsp. pallidum Amoy [CP015162] 562873 562945 + Phe GAA - ¡û
>C131001868 CP003064 Spirochaetota Treponema pallidum subsp. pallidum str. Mexico A [CP003064] 699657 699729 + Phe GAA [Ensembl] ¡û
>C131009499 CP003902 Spirochaetota Treponema pallidum str. Fribourg-Blanc [CP003902] 699987 700059 + Phe GAA [Ensembl] ¡û
>C131011360 CP004010 Spirochaetota Treponema pallidum subsp. pallidum str. Nichols [CP004010] 699277 699349 + Phe GAA - ¡û
>C131011404 CP004011 Spirochaetota Treponema pallidum subsp. pallidum SS14 [CP004011] 699163 699235 + Phe GAA - ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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