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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.237432 (219 seq.)
>W1710924144
LOCS01000015
Gammaproteobacteria
Escherichia coli [LOCS]
794
719
-
Thr
TGT
[ENA]
¡û
>W1710928254
LOFT01000040
Gammaproteobacteria
Escherichia coli [LOFT]
63326
63401
+
Thr
TGT
[ENA]
¡û
>W1710984413
LPSY01000202
Gammaproteobacteria
Shigella boydii [LPSY]
2720
2645
-
Thr
TGT
[ENA]
¡û
>W1710984420
LPSY01000251
Gammaproteobacteria
Shigella boydii [LPSY]
1608
1683
+
Thr
TGT
[ENA]
¡û
>W1710985420
LPTK01000326
Gammaproteobacteria
Shigella boydii [LPTK]
505
580
+
Thr
TGT
[ENA]
¡û
>W1710985990
LPTR01000174
Gammaproteobacteria
Shigella boydii [LPTR]
971
1046
+
Thr
TGT
[ENA]
¡û
>W1710986007
LPTR01000233
Gammaproteobacteria
Shigella boydii [LPTR]
1110
1035
-
Thr
TGT
[ENA]
¡û
>W1711013926
LQTW01000095
Gammaproteobacteria
Escherichia coli [LQTW]
1143
1068
-
Thr
TGT
[ENA]
¡û
>W1711060803
LRXX01000073
Gammaproteobacteria
Escherichia coli [LRXX]
1077
1002
-
Thr
TGT
[ENA]
¡û
>W1711146526
LVJA01000156
Gammaproteobacteria
Shigella flexneri [LVJA]
4125
4200
+
Thr
TGT
[ENA]
¡û
>W1711146538
LVJA01000183
Gammaproteobacteria
Shigella flexneri [LVJA]
1216
1291
+
Thr
TGT
[ENA]
¡û
>W1711146547
LVJA01000240
Gammaproteobacteria
Shigella flexneri [LVJA]
97
22
-
Thr
TGT
[ENA]
¡û
>W1711146551
LVJA01000275
Gammaproteobacteria
Shigella flexneri [LVJA]
1022
1097
+
Thr
TGT
[ENA]
¡û
>W1711146552
LVJA01000304
Gammaproteobacteria
Shigella flexneri [LVJA]
31
106
+
Thr
TGT
[ENA]
¡û
>W1711151980
LVMT01000442
Gammaproteobacteria
Escherichia coli [LVMT]
5249
5324
+
Thr
TGT
[ENA]
¡û
>W1711152433
LVMZ01000266
Gammaproteobacteria
Escherichia coli [LVMZ]
3123
3048
-
Thr
TGT
[ENA]
¡û
>W1711226290
LXVD01000082
Gammaproteobacteria
Shigella sonnei [LXVD]
258
333
+
Thr
TGT
[ENA]
¡û
>W1711237560
LYEG01000181
Gammaproteobacteria
Shigella sonnei [LYEG]
474
399
-
Thr
TGT
[ENA]
¡û
>W1711383938
MECW01000293
Gammaproteobacteria
Shigella sp. FC1056 [MECW]
1362
1437
+
Thr
TGT
[ENA]
¡û
>W1711450650
MIWD01000047
Gammaproteobacteria
Escherichia coli [MIWD]
11785
11860
+
Thr
TGT
[ENA]
¡û
>W1711776163
MVKL01000030
Gammaproteobacteria
Vibrio parahaemolyticus [MVKL]
24788
24863
+
Thr
TGT
[ENA]
¡û
>W1712011647
NEMJ01000020
Gammaproteobacteria
Escherichia coli [NEMJ]
30592
30517
-
Thr
TGT
[ENA]
¡û
>W1712011704
NEMK01000004
Gammaproteobacteria
Escherichia coli [NEMK]
262472
262547
+
Thr
TGT
[ENA]
¡û
>W1712012412
NEMS01000052
Gammaproteobacteria
Escherichia coli [NEMS]
12681
12606
-
Thr
TGT
[ENA]
¡û
>W1712016168
NEOL01000075
Gammaproteobacteria
Escherichia coli [NEOL]
3137
3062
-
Thr
TGT
[ENA]
¡û
>W1712078770
NGVX01000448
Gammaproteobacteria
Shigella flexneri [NGVX]
137
212
+
Thr
TGT
[ENA]
¡û
>W1712079395
NGWG01000337
Gammaproteobacteria
Shigella flexneri [NGWG]
797
722
-
Thr
TGT
[ENA]
¡û
>W131090990
AOGM01000030
Gammaproteobacteria
Escherichia coli O08 [AOGM]
113140
113215
+
Thr
TGT
[ENA]
¡û
>W131165541
ARBQ01000076
Gammaproteobacteria
Gallibacterium anatis DSM 16844 = F 149 [ARBQ]
9120
9195
+
Thr
TGT
[ENA]
¡û
>W141206351
AZLZ01001747
Gammaproteobacteria
Escherichia coli DORA_A_5_14_21 [AZLZ]
104
29
-
Thr
TGT
[ENA]
¡û
>W141208418
AZOL01000297
Gammaproteobacteria
Shigella flexneri Shi06HN118 [AZOL]
947
1022
+
Thr
TGT
[ENA]
¡û
>W141208485
AZOM01000254
Gammaproteobacteria
Shigella flexneri Shi06HN023 [AZOM]
947
1022
+
Thr
TGT
[ENA]
¡û
>W141208501
AZOM01000291
Gammaproteobacteria
Shigella flexneri Shi06HN023 [AZOM]
3638
3713
+
Thr
TGT
[ENA]
¡û
>W141208613
AZOO01000178
Gammaproteobacteria
Shigella flexneri Shi06AH135 [AZOO]
945
1020
+
Thr
TGT
[ENA]
¡û
>W141208633
AZOO01000262
Gammaproteobacteria
Shigella flexneri Shi06AH135 [AZOO]
2429
2354
-
Thr
TGT
[ENA]
¡û
>W141209720
AZPD01000275
Gammaproteobacteria
Shigella flexneri 51575 [AZPD]
943
1018
+
Thr
TGT
[ENA]
¡û
>W141210081
AZPJ01000044
Gammaproteobacteria
Shigella flexneri 2001020 [AZPJ]
933
1008
+
Thr
TGT
[ENA]
¡û
>W141211445
AZQD01000026
Gammaproteobacteria
Shigella flexneri Shi06HN347 [AZQD]
2679
2604
-
Thr
TGT
[ENA]
¡û
>W141211506
AZQD01000286
Gammaproteobacteria
Shigella flexneri Shi06HN347 [AZQD]
2370
2295
-
Thr
TGT
[ENA]
¡û
>W141211573
AZQE01000252
Gammaproteobacteria
Shigella flexneri Shi06HN091 [AZQE]
2695
2620
-
Thr
TGT
[ENA]
¡û
>WENV182611325
OJJX01000012
[OJJX] metagenome; faeces
310824
310899
+
Thr
TGT
[ENA]
¢þ
>WENV183166470
OLOY01000055
[OLOY] human gut metagenome; faeces
102064
102139
+
Thr
TGT
[ENA]
¢þ
>WENV183537248
OOAG01063298
[OOAG] human gut metagenome; human gut
714
639
-
Thr
TGT
[ENA]
¢þ
>WENV183785894
PPYF01298498
[PPYF] human gut metagenome; stool from patient with Crohn's disease
1050
975
-
Thr
TGT
[ENA]
¢þ
>C181100364
CP024473
Gammaproteobacteria
Shigella flexneri 7b 94-3007 [CP024473]
2673866
2673941
+
Thr
TGT
-
¡û
>C181100368
CP024473
Gammaproteobacteria
Shigella flexneri 7b 94-3007 [CP024473]
3376503
3376578
+
Thr
TGT
-
¡û
>C181100394
CP024473
Gammaproteobacteria
Shigella flexneri 7b 94-3007 [CP024473]
3903301
3903226
-
Thr
TGT
-
¡û
>C181195627
CP031105
Gammaproteobacteria
Escherichia coli AMSCJX02 [CP031105]
4505235
4505310
+
Thr
TGT
-
¡û
>C191038483
CP025847
Gammaproteobacteria
Escherichia coli 602354 [CP025847]
4404293
4404218
-
Thr
TGT
-
¡û
>C191120590
CP034162
Gammaproteobacteria
Escherichia albertii 06-3542 [CP034162]
630198
630273
+
Thr
TGT
-
¡û
>C191154921
CP037923
Gammaproteobacteria
Shigella flexneri 5a str. M90T [CP037923]
1273513
1273588
+
Thr
TGT
-
¡û
>C191154982
CP037923
Gammaproteobacteria
Shigella flexneri 5a str. M90T [CP037923]
1799560
1799485
-
Thr
TGT
-
¡û
>C191154996
CP037923
Gammaproteobacteria
Shigella flexneri 5a str. M90T [CP037923]
437679
437604
-
Thr
TGT
-
¡û
>C191156821
CP037997
Gammaproteobacteria
Shigella sonnei FC1653 [CP037997]
4269733
4269658
-
Thr
TGT
-
¡û
>C191156833
CP037997
Gammaproteobacteria
Shigella sonnei FC1653 [CP037997]
3208623
3208548
-
Thr
TGT
-
¡û
>W141807925
JPPN01000031
Gammaproteobacteria
Shigella flexneri [JPPN]
1700
1775
+
Thr
TGT
[ENA]
¡û
>W141807939
JPPN01000068
Gammaproteobacteria
Shigella flexneri [JPPN]
3116
3041
-
Thr
TGT
[ENA]
¡û
>W141807943
JPPN01000083
Gammaproteobacteria
Shigella flexneri [JPPN]
3183
3108
-
Thr
TGT
[ENA]
¡û
>W1910076581
BFKI01000019
Gammaproteobacteria
Escherichia coli HH-P001 [BFKI]
11906
11981
+
Thr
TGT
[ENA]
¡û
>W1910077900
BFKY01000157
Gammaproteobacteria
Escherichia coli HH-P056 [BFKY]
1250
1175
-
Thr
TGT
[ENA]
¡û
>W1910106957
BGAG01000026
Gammaproteobacteria
Escherichia coli KS-P022 [BGAG]
1537
1462
-
Thr
TGT
[ENA]
¡û
>W1910112008
BGCS01000006
Gammaproteobacteria
Escherichia coli NS-NP027 [BGCS]
28609
28684
+
Thr
TGT
[ENA]
¡û
>W1910130101
BHZO01000048
Gammaproteobacteria
Escherichia coli 12-1BK [BHZO]
1272
1197
-
Thr
TGT
[ENA]
¡û
>W1910132810
BIAX01000073
Gammaproteobacteria
Escherichia coli 44-1BK [BIAX]
1269
1194
-
Thr
TGT
[ENA]
¡û
>W1910532567
FZET01000168
Gammaproteobacteria
Escherichia coli [FZET]
1727
1802
+
Thr
TGT
[ENA]
¡û
>W1910532964
FZEY01000168
Gammaproteobacteria
Escherichia coli [FZEY]
1765
1840
+
Thr
TGT
[ENA]
¡û
>W1910591899
JZOM01000018
Gammaproteobacteria
Escherichia coli HT2012040 [JZOM]
413219
413294
+
Thr
TGT
[ENA]
¡û
>W1910592406
JZOT01000014
Gammaproteobacteria
Escherichia coli HT2012025 [JZOT]
9663
9738
+
Thr
TGT
[ENA]
¡û
>W1910593586
JZPK01000140
Gammaproteobacteria
Escherichia coli HT2012178 [JZPK]
8835
8910
+
Thr
TGT
[ENA]
¡û
>W1910593613
JZPK01000204
Gammaproteobacteria
Escherichia coli HT2012178 [JZPK]
1600
1675
+
Thr
TGT
[ENA]
¡û
>W1910594297
JZPW01000023
Gammaproteobacteria
Escherichia coli HT2012153 [JZPW]
22832
22757
-
Thr
TGT
[ENA]
¡û
>W1910594843
JZQF01000114
Gammaproteobacteria
Escherichia coli HT2012135 [JZQF]
1213
1138
-
Thr
TGT
[ENA]
¡û
>W1910594845
JZQF01000117
Gammaproteobacteria
Escherichia coli HT2012135 [JZQF]
4173
4248
+
Thr
TGT
[ENA]
¡û
>W1910956127
NJSK01000099
Gammaproteobacteria
Escherichia coli MOD1-EC2703 [NJSK]
1692
1617
-
Thr
TGT
[ENA]
¡û
>W1910960057
NJUK01000020
Gammaproteobacteria
Escherichia coli MOD1-EC1679 [NJUK]
30363
30288
-
Thr
TGT
[ENA]
¡û
>W1910961237
NJVA01000017
Gammaproteobacteria
Escherichia coli MOD1-EC1635 [NJVA]
76223
76148
-
Thr
TGT
[ENA]
¡û
>W1911003551
NLFM01000011
Gammaproteobacteria
Gallibacterium anatis 2PKA3 [NLFM]
68992
68917
-
Thr
TGT
[ENA]
¡û
>W1911010151
NLIW01000022
Gammaproteobacteria
Escherichia coli MOD1-EC5663 [NLIW]
76852
76777
-
Thr
TGT
[ENA]
¡û
>W1911017831
NLMT01000151
Gammaproteobacteria
Escherichia coli MOD1-EC5524 [NLMT]
2552
2627
+
Thr
TGT
[ENA]
¡û
>W1911029640
NLTW01000085
Gammaproteobacteria
Escherichia coli MOD1-EC5054 [NLTW]
1106
1031
-
Thr
TGT
[ENA]
¡û
>W1911037436
NLXW01000013
Gammaproteobacteria
Escherichia coli MOD1-EC6426 [NLXW]
218943
219018
+
Thr
TGT
[ENA]
¡û
>W1911046470
NMCN01000064
Gammaproteobacteria
Escherichia coli MOD1-EC6127 [NMCN]
12711
12786
+
Thr
TGT
[ENA]
¡û
>W1911052664
NMFW01000042
Gammaproteobacteria
Escherichia coli MOD1-EC5986 [NMFW]
31199
31274
+
Thr
TGT
[ENA]
¡û
>W1911057918
NMIQ01000016
Gammaproteobacteria
Escherichia coli MOD1-EC6358 [NMIQ]
98224
98299
+
Thr
TGT
[ENA]
¡û
>W1911057972
NMIR01000003
Gammaproteobacteria
Escherichia coli MOD1-EC6357 [NMIR]
30510
30435
-
Thr
TGT
[ENA]
¡û
>W1911066488
NMMW01000172
Gammaproteobacteria
Escherichia coli MOD1-EC6557 [NMMW]
167
242
+
Thr
TGT
[ENA]
¡û
>W1911088585
NNUI01000049
Gammaproteobacteria
Escherichia coli MOD1-EC6636 [NNUI]
12747
12822
+
Thr
TGT
[ENA]
¡û
>W1911094965
NNXR01000274
Gammaproteobacteria
Escherichia coli MOD1-EC6270 [NNXR]
79
4
-
Thr
TGT
[ENA]
¡û
>W1911109586
NOFO01000128
Gammaproteobacteria
Escherichia coli MOD1-EC5166 [NOFO]
436
511
+
Thr
TGT
[ENA]
¡û
>W1911112703
NOHJ01000012
Gammaproteobacteria
Escherichia coli MOD1-EC5072 [NOHJ]
154620
154695
+
Thr
TGT
[ENA]
¡û
>W1911127008
NOPZ01000161
Gammaproteobacteria
Escherichia coli MOD1-EC6862 [NOPZ]
1192
1117
-
Thr
TGT
[ENA]
¡û
>W1911133343
NOTJ01000002
Gammaproteobacteria
Escherichia coli MOD1-EC6738 [NOTJ]
159524
159599
+
Thr
TGT
[ENA]
¡û
>W1911408215
NWRY01000052
Gammaproteobacteria
Escherichia coli OLC1334 [NWRY]
12681
12606
-
Thr
TGT
[ENA]
¡û
>W1911612321
POAE01000058
Gammaproteobacteria
Escherichia coli 102221 [POAE]
3634
3559
-
Thr
TGT
[ENA]
¡û
>W1911613130
POAS01000001
Gammaproteobacteria
Escherichia coli 320430 [POAS]
233074
232999
-
Thr
TGT
[ENA]
¡û
>W1911658876
QESR01000091
Gammaproteobacteria
Escherichia coli 1·î26Æü [QESR]
788
863
+
Thr
TGT
[ENA]
¡û
>W1911723061
QRFM01000114
Gammaproteobacteria
Escherichia coli SE573 [QRFM]
1242
1167
-
Thr
TGT
[ENA]
¡û
>W1911758121
QWSL01000110
Gammaproteobacteria
Shigella flexneri DMB SH20012 [QWSL]
2908
2833
-
Thr
TGT
[ENA]
¡û
>W1810065878
PDXT01000230
Gammaproteobacteria
Shigella flexneri FC2414 [PDXT]
932
857
-
Thr
TGT
[ENA]
¡û
>W1810065890
PDXT01000436
Gammaproteobacteria
Shigella flexneri FC2414 [PDXT]
215
290
+
Thr
TGT
[ENA]
¡û
>W1810066340
PDXZ01000438
Gammaproteobacteria
Shigella sonnei FC1667 [PDXZ]
252
327
+
Thr
TGT
[ENA]
¡û
>W1810145947
PIOQ01000163
Gammaproteobacteria
Escherichia coli KCJK6238 [PIOQ]
5643
5718
+
Thr
TGT
[ENA]
¡û
>W1810166620
PJHX01000002
Gammaproteobacteria
Escherichia coli GS11 [PJHX]
192915
192990
+
Thr
TGT
[ENA]
¡û
>W1810276711
PSST01000003
Gammaproteobacteria
Shigella dysenteriae ATCC 49550 [PSST]
949665
949590
-
Thr
TGT
[ENA]
¡û
>W1810306962
PTRO01000148
Gammaproteobacteria
Escherichia sp. MOD1-EC4516 [PTRO]
12068
12143
+
Thr
TGT
[ENA]
¡û
>W1810307103
PTRQ01000050
Gammaproteobacteria
Escherichia sp. MOD1-EC1915 [PTRQ]
7065
7140
+
Thr
TGT
[ENA]
¡û
>W1810307705
PTRY01000056
Gammaproteobacteria
Escherichia sp. MOD1-EC4560 [PTRY]
7592
7667
+
Thr
TGT
[ENA]
¡û
>W1810327611
PUGQ02000318
Gammaproteobacteria
Shigella flexneri BS982 [PUGQ]
770
695
-
Thr
TGT
[ENA]
¡û
>W1810327634
PUGQ02000489
Gammaproteobacteria
Shigella flexneri BS982 [PUGQ]
93
18
-
Thr
TGT
[ENA]
¡û
>W1810328034
PUGW01000028
Gammaproteobacteria
Shigella flexneri BS972 [PUGW]
1049
1124
+
Thr
TGT
[ENA]
¡û
>W1810328051
PUGW01000067
Gammaproteobacteria
Shigella flexneri BS972 [PUGW]
3740
3815
+
Thr
TGT
[ENA]
¡û
>W1810328095
PUGW01000311
Gammaproteobacteria
Shigella flexneri BS972 [PUGW]
146
71
-
Thr
TGT
[ENA]
¡û
>W1810328621
PUHC01000117
Gammaproteobacteria
Shigella flexneri BS962 [PUHC]
3740
3815
+
Thr
TGT
[ENA]
¡û
>W1810328667
PUHC01000337
Gammaproteobacteria
Shigella flexneri BS962 [PUHC]
1049
1124
+
Thr
TGT
[ENA]
¡û
>W1810328685
PUHC01000405
Gammaproteobacteria
Shigella flexneri BS962 [PUHC]
206
281
+
Thr
TGT
[ENA]
¡û
>W1810329206
PUHI01000590
Gammaproteobacteria
Shigella flexneri BS937 [PUHI]
80
5
-
Thr
TGT
[ENA]
¡û
>W1810329232
PUHI01001493
Gammaproteobacteria
Shigella flexneri BS937 [PUHI]
80
5
-
Thr
TGT
[ENA]
¡û
>W1810404501
PYKS01000142
Gammaproteobacteria
Shigella sp. SHS-8 [PYKS]
4014
4089
+
Thr
TGT
[ENA]
¡û
>W1510679873
CWUD01000214
Gammaproteobacteria
Shigella sonnei 26501ss_1 [CWUD]
1170
1095
-
Thr
TGT
[ENA]
¡û
>W1510680513
CWUM01000267
Gammaproteobacteria
Shigella sonnei 25201ss_1 [CWUM]
3898
3973
+
Thr
TGT
[ENA]
¡û
>W1510681191
CWUV01000201
Gammaproteobacteria
Shigella sonnei 201312273_1 [CWUV]
1463
1388
-
Thr
TGT
[ENA]
¡û
>W1510683664
CWWB01000221
Gammaproteobacteria
Shigella sonnei 201403955_1 [CWWB]
521
446
-
Thr
TGT
[ENA]
¡û
>W1510684343
CWWK01000148
Gammaproteobacteria
Shigella sonnei 201405327_1 [CWWK]
5949
5874
-
Thr
TGT
[ENA]
¡û
>W1510685019
CWWS01000392
Gammaproteobacteria
Shigella sonnei KY 2529 [CWWS]
258
333
+
Thr
TGT
[ENA]
¡û
>W1510685681
CWXA01000227
Gammaproteobacteria
Shigella sonnei 20426787 [CWXA]
439
364
-
Thr
TGT
[ENA]
¡û
>W1510687774
CWYA01000227
Gammaproteobacteria
Shigella sonnei 20177848 [CWYA]
658
583
-
Thr
TGT
[ENA]
¡û
>W1510687997
CWYD01000216
Gammaproteobacteria
Shigella sonnei H092740550 [CWYD]
3955
4030
+
Thr
TGT
[ENA]
¡û
>W1510688681
CWYM01000222
Gammaproteobacteria
Shigella sonnei H101960391 [CWYM]
477
402
-
Thr
TGT
[ENA]
¡û
>W1510690204
CWZG01000224
Gammaproteobacteria
Shigella sonnei H132860550 [CWZG]
3953
4028
+
Thr
TGT
[ENA]
¡û
>W1510690660
CWZM01000232
Gammaproteobacteria
Shigella sonnei H140860383 [CWZM]
468
393
-
Thr
TGT
[ENA]
¡û
>W1510690809
CWZO01000232
Gammaproteobacteria
Shigella sonnei H132940676 [CWZO]
431
356
-
Thr
TGT
[ENA]
¡û
>W1510699458
CXEF01000221
Gammaproteobacteria
Shigella sonnei 20040880_1361372 [CXEF]
3939
4014
+
Thr
TGT
[ENA]
¡û
>W1510702604
CXFT01000214
Gammaproteobacteria
Shigella sonnei sh03-0995 [CXFT]
3943
4018
+
Thr
TGT
[ENA]
¡û
>W1510703792
CXGI01000228
Gammaproteobacteria
Shigella sonnei SS127858_2798529 [CXGI]
396
321
-
Thr
TGT
[ENA]
¡û
>W1510705275
CXHA01000251
Gammaproteobacteria
Shigella sonnei H113100099 [CXHA]
4012
4087
+
Thr
TGT
[ENA]
¡û
>W1510705353
CXHB01000213
Gammaproteobacteria
Shigella sonnei H112620255 [CXHB]
3997
4072
+
Thr
TGT
[ENA]
¡û
>W1510707291
CXHZ01000203
Gammaproteobacteria
Shigella sonnei 82205 [CXHZ]
514
439
-
Thr
TGT
[ENA]
¡û
>W1510709654
CXJC01000216
Gammaproteobacteria
Shigella sonnei 87026 [CXJC]
512
437
-
Thr
TGT
[ENA]
¡û
>W1510710858
CXJR01000224
Gammaproteobacteria
Shigella sonnei 93028 [CXJR]
511
436
-
Thr
TGT
[ENA]
¡û
>W1510711816
CXKD01000216
Gammaproteobacteria
Shigella sonnei 99382 [CXKD]
3985
4060
+
Thr
TGT
[ENA]
¡û
>W1510716560
CXMK01000234
Gammaproteobacteria
Shigella sonnei 92497962 [CXMK]
496
421
-
Thr
TGT
[ENA]
¡û
>W1510718932
CXNN01000219
Gammaproteobacteria
Shigella sonnei 144358 [CXNN]
529
454
-
Thr
TGT
[ENA]
¡û
>W1510721002
CXWT01000022
Gammaproteobacteria
Escherichia coli [CXWT]
80346
80421
+
Thr
TGT
[ENA]
¡û
>W1510721017
CXWT01000049
Gammaproteobacteria
Escherichia coli [CXWT]
15885
15960
+
Thr
TGT
[ENA]
¡û
>W1511376633
JSNZ01000078
Gammaproteobacteria
Escherichia coli upec-126 [JSNZ]
153039
153114
+
Thr
TGT
[ENA]
¡û
>W1511397240
JTCO01000049
Gammaproteobacteria
Escherichia coli 4608-58 [JTCO]
11787
11862
+
Thr
TGT
[ENA]
¡û
>W1511397266
JTCO01000104
Gammaproteobacteria
Escherichia coli 4608-58 [JTCO]
2854
2779
-
Thr
TGT
[ENA]
¡û
>W1511397297
JTCO01000247
Gammaproteobacteria
Escherichia coli 4608-58 [JTCO]
218
143
-
Thr
TGT
[ENA]
¡û
>W1511426911
JUCF01000127
Gammaproteobacteria
Escherichia coli CVM N36834PS [JUCF]
3095
3170
+
Thr
TGT
[ENA]
¡û
>W1511488455
JWSL01000004
Gammaproteobacteria
Shigella flexneri CFSAN027317 [JWSL]
3709606
3709531
-
Thr
TGT
[ENA]
¡û
>W1511568892
LAJR01000110
Gammaproteobacteria
Shigella flexneri 6 BS1040 [LAJR]
838
763
-
Thr
TGT
[ENA]
¡û
>W1511568907
LAJR01000184
Gammaproteobacteria
Shigella flexneri 6 BS1040 [LAJR]
949
874
-
Thr
TGT
[ENA]
¡û
>W1511569013
LAJS01000223
Gammaproteobacteria
Shigella flexneri 2a BS1057 [LAJS]
154
79
-
Thr
TGT
[ENA]
¡û
>W1511569019
LAJS01000246
Gammaproteobacteria
Shigella flexneri 2a BS1057 [LAJS]
191
116
-
Thr
TGT
[ENA]
¡û
>W1511569036
LAJS01000339
Gammaproteobacteria
Shigella flexneri 2a BS1057 [LAJS]
2437
2362
-
Thr
TGT
[ENA]
¡û
>W1511630527
LDCY01000002
Gammaproteobacteria
Escherichia coli CFSAN026836 [LDCY]
1135
1060
-
Thr
TGT
[ENA]
¡û
>W1511630670
LDCZ01000082
Gammaproteobacteria
Escherichia coli CFSAN026835 [LDCZ]
1135
1060
-
Thr
TGT
[ENA]
¡û
>W11151548
AEXD01000008
Gammaproteobacteria
Escherichia coli STEC_7v [AEXD]
267677
267752
+
Thr
TGT
[ENA]
¡û
>W11153288
AEZI01000010
Gammaproteobacteria
Escherichia coli 1.2741 [AEZI]
258
183
-
Thr
TGT
[ENA]
¡û
>W11153327
AEZI01000041
Gammaproteobacteria
Escherichia coli 1.2741 [AEZI]
727530
727605
+
Thr
TGT
[ENA]
¡û
>W1511693110
LFZJ01000005
Gammaproteobacteria
Escherichia coli IH57218 [LFZJ]
17764
17689
-
Thr
TGT
[ENA]
¡û
>W1511703295
LGNW01000025
Gammaproteobacteria
Vibrio cholerae O1 NHCC-078 [LGNW]
361
286
-
Thr
TGT
[ENA]
¡û
>W1511703785
LGOC01000013
Gammaproteobacteria
Vibrio cholerae O1 NHCM-01 [LGOC]
71637
71562
-
Thr
TGT
[ENA]
¡û
>W11160847
AFFZ01000058
Gammaproteobacteria
Shigella dysenteriae 155-74 [AFFZ]
236
311
+
Thr
TGT
[ENA]
¡û
>W11160860
AFFZ01000069
Gammaproteobacteria
Shigella dysenteriae 155-74 [AFFZ]
183373
183298
-
Thr
TGT
[ENA]
¡û
>W11162159
AFGZ01000011
Gammaproteobacteria
Shigella flexneri K-304 [AFGZ]
204395
204470
+
Thr
TGT
[ENA]
¡û
>W11162171
AFGZ01000013
Gammaproteobacteria
Shigella flexneri K-304 [AFGZ]
4737
4812
+
Thr
TGT
[ENA]
¡û
>W11162179
AFGZ01000026
Gammaproteobacteria
Shigella flexneri K-304 [AFGZ]
4514
4439
-
Thr
TGT
[ENA]
¡û
>W11162188
AFGZ01000042
Gammaproteobacteria
Shigella flexneri K-304 [AFGZ]
4925
4850
-
Thr
TGT
[ENA]
¡û
>C161058899
CP013663
Gammaproteobacteria
Escherichia coli GB089 [CP013663]
1490632
1490707
+
Thr
TGT
-
¡û
>C161058961
CP013663
Gammaproteobacteria
Escherichia coli GB089 [CP013663]
2471410
2471335
-
Thr
TGT
-
¡û
>C161085123
CP015228
Gammaproteobacteria
Escherichia coli 09-00049 [CP015228]
2506574
2506499
-
Thr
TGT
[Ensembl]
¡û
>C161085220
CP015229
Gammaproteobacteria
Escherichia coli 06-00048 [CP015229]
2620221
2620146
-
Thr
TGT
[Ensembl]
¡û
>W121002851
AEXG01000027
Gammaproteobacteria
Escherichia coli E101 [AEXG]
18358
18283
-
Thr
TGT
[ENA]
¡û
>W121051549
AIGE01000018
Gammaproteobacteria
Escherichia coli DEC7E [AIGE]
10107
10032
-
Thr
TGT
[ENA]
¡û
>W1610006618
AMJT01000055
Gammaproteobacteria
Shigella flexneri S6585 [AMJT]
58724
58799
+
Thr
TGT
[ENA]
¡û
>W1610006622
AMJT01000055
Gammaproteobacteria
Shigella flexneri S6585 [AMJT]
67764
67839
+
Thr
TGT
[ENA]
¡û
>W1610006635
AMJT01000083
Gammaproteobacteria
Shigella flexneri S6585 [AMJT]
52488
52413
-
Thr
TGT
[ENA]
¡û
>W1610007701
AMKF01000019
Gammaproteobacteria
Shigella flexneri MT1457 [AMKF]
979
904
-
Thr
TGT
[ENA]
¡û
>W1610007708
AMKF01000030
Gammaproteobacteria
Shigella flexneri MT1457 [AMKF]
184763
184838
+
Thr
TGT
[ENA]
¡û
>W1610007716
AMKF01000038
Gammaproteobacteria
Shigella flexneri MT1457 [AMKF]
16833
16758
-
Thr
TGT
[ENA]
¡û
>W1610007737
AMKF01000070
Gammaproteobacteria
Shigella flexneri MT1457 [AMKF]
6411
6486
+
Thr
TGT
[ENA]
¡û
>W1610008285
AMKL01000053
Gammaproteobacteria
Shigella sonnei 09-4962 [AMKL]
9108
9033
-
Thr
TGT
[ENA]
¡û
>W1610008313
AMKL01000062
Gammaproteobacteria
Shigella sonnei 09-4962 [AMKL]
118555
118480
-
Thr
TGT
[ENA]
¡û
>W1610055180
BBVJ01000075
Gammaproteobacteria
Escherichia albertii [BBVJ]
3526
3601
+
Thr
TGT
[ENA]
¡û
>W1610055729
BBVS01000054
Gammaproteobacteria
Escherichia albertii [BBVS]
1662
1587
-
Thr
TGT
[ENA]
¡û
>W1610545264
JTJQ01000003
Gammaproteobacteria
Gallibacterium genomosp. 1 [JTJQ]
16324
16399
+
Thr
TGT
[ENA]
¡û
>W1610545445
JTJT01000089
Gammaproteobacteria
Gallibacterium salpingitidis [JTJT]
8511
8586
+
Thr
TGT
[ENA]
¡û
>W1610550799
JXUH01000208
Gammaproteobacteria
Escherichia coli [JXUH]
4245
4320
+
Thr
TGT
[ENA]
¡û
>W1610574462
JZDN01000054
Gammaproteobacteria
Escherichia coli [JZDN]
14983
15058
+
Thr
TGT
[ENA]
¡û
>W1610781790
LOCS01000015
Gammaproteobacteria
Escherichia coli [LOCS]
794
719
-
Thr
TGT
[ENA]
¡û
>W1610785796
LOFT01000040
Gammaproteobacteria
Escherichia coli [LOFT]
63326
63401
+
Thr
TGT
[ENA]
¡û
>W1610862402
LQTW01000095
Gammaproteobacteria
Escherichia coli [LQTW]
1143
1068
-
Thr
TGT
[ENA]
¡û
>W1610901780
LRXX01000073
Gammaproteobacteria
Escherichia coli [LRXX]
1077
1002
-
Thr
TGT
[ENA]
¡û
>W1610957474
LVJA01000156
Gammaproteobacteria
Shigella flexneri [LVJA]
4125
4200
+
Thr
TGT
[ENA]
¡û
>W1610957486
LVJA01000183
Gammaproteobacteria
Shigella flexneri [LVJA]
1216
1291
+
Thr
TGT
[ENA]
¡û
>W1610957495
LVJA01000240
Gammaproteobacteria
Shigella flexneri [LVJA]
97
22
-
Thr
TGT
[ENA]
¡û
>W1610957499
LVJA01000275
Gammaproteobacteria
Shigella flexneri [LVJA]
1022
1097
+
Thr
TGT
[ENA]
¡û
>W1610957500
LVJA01000304
Gammaproteobacteria
Shigella flexneri [LVJA]
31
106
+
Thr
TGT
[ENA]
¡û
>W1610962520
LVMT01000442
Gammaproteobacteria
Escherichia coli [LVMT]
5249
5324
+
Thr
TGT
[ENA]
¡û
>W1610962973
LVMZ01000266
Gammaproteobacteria
Escherichia coli [LVMZ]
3123
3048
-
Thr
TGT
[ENA]
¡û
>W1611010254
LXVD01000082
Gammaproteobacteria
Shigella sonnei [LXVD]
258
333
+
Thr
TGT
[ENA]
¡û
>W1611015374
LYEG01000181
Gammaproteobacteria
Shigella sonnei [LYEG]
474
399
-
Thr
TGT
[ENA]
¡û
>W1710006277
AMJT01000055
Gammaproteobacteria
Shigella flexneri S6585 [AMJT]
58724
58799
+
Thr
TGT
[ENA]
¡û
>W1710006281
AMJT01000055
Gammaproteobacteria
Shigella flexneri S6585 [AMJT]
67764
67839
+
Thr
TGT
[ENA]
¡û
>W1710006294
AMJT01000083
Gammaproteobacteria
Shigella flexneri S6585 [AMJT]
52488
52413
-
Thr
TGT
[ENA]
¡û
>W1710007360
AMKF01000019
Gammaproteobacteria
Shigella flexneri MT1457 [AMKF]
979
904
-
Thr
TGT
[ENA]
¡û
>W1710007367
AMKF01000030
Gammaproteobacteria
Shigella flexneri MT1457 [AMKF]
184763
184838
+
Thr
TGT
[ENA]
¡û
>W1710007375
AMKF01000038
Gammaproteobacteria
Shigella flexneri MT1457 [AMKF]
16833
16758
-
Thr
TGT
[ENA]
¡û
>W1710007396
AMKF01000070
Gammaproteobacteria
Shigella flexneri MT1457 [AMKF]
6411
6486
+
Thr
TGT
[ENA]
¡û
>W1710007944
AMKL01000053
Gammaproteobacteria
Shigella sonnei 09-4962 [AMKL]
9108
9033
-
Thr
TGT
[ENA]
¡û
>W1710007972
AMKL01000062
Gammaproteobacteria
Shigella sonnei 09-4962 [AMKL]
118555
118480
-
Thr
TGT
[ENA]
¡û
>W1710051879
BBVJ01000075
Gammaproteobacteria
Escherichia albertii [BBVJ]
3526
3601
+
Thr
TGT
[ENA]
¡û
>W1710052428
BBVS01000054
Gammaproteobacteria
Escherichia albertii [BBVS]
1662
1587
-
Thr
TGT
[ENA]
¡û
>W1710084182
BDLM01000062
Gammaproteobacteria
Escherichia coli [BDLM]
21273
21198
-
Thr
TGT
[ENA]
¡û
>W1710648395
JTJQ01000003
Gammaproteobacteria
Gallibacterium genomosp. 1 [JTJQ]
16324
16399
+
Thr
TGT
[ENA]
¡û
>W1710648576
JTJT01000089
Gammaproteobacteria
Gallibacterium salpingitidis [JTJT]
8511
8586
+
Thr
TGT
[ENA]
¡û
>W1710660634
JXUH01000208
Gammaproteobacteria
Escherichia coli [JXUH]
4245
4320
+
Thr
TGT
[ENA]
¡û
>W1710687241
JZDN01000054
Gammaproteobacteria
Escherichia coli [JZDN]
14983
15058
+
Thr
TGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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