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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.238045 (247 seq.)
>W1710908960
LNQB01000072
Alphaproteobacteria
Sinorhizobium saheli [LNQB]
98288
98363
+
Glu
TTC
[ENA]
¡û
>W1710908961
LNQB01000072
Alphaproteobacteria
Sinorhizobium saheli [LNQB]
98540
98615
+
Glu
TTC
[ENA]
¡û
>W1710908963
LNQB01000072
Alphaproteobacteria
Sinorhizobium saheli [LNQB]
108571
108646
+
Glu
TTC
[ENA]
¡û
>W1710909021
LNQC01000056
Alphaproteobacteria
Sinorhizobium americanum [LNQC]
64695
64620
-
Glu
TTC
[ENA]
¡û
>W1710909023
LNQC01000056
Alphaproteobacteria
Sinorhizobium americanum [LNQC]
59074
58999
-
Glu
TTC
[ENA]
¡û
>W1710987750
LPUX01000068
Alphaproteobacteria
Sinorhizobium glycinis [LPUX]
192767
192692
-
Glu
TTC
[ENA]
¡û
>W1710987751
LPUX01000068
Alphaproteobacteria
Sinorhizobium glycinis [LPUX]
192442
192367
-
Glu
TTC
[ENA]
¡û
>W1710987753
LPUX01000068
Alphaproteobacteria
Sinorhizobium glycinis [LPUX]
192063
191988
-
Glu
TTC
[ENA]
¡û
>W1711116197
LUAV01000007
Alphaproteobacteria
Ensifer aridi [LUAV]
183310
183235
-
Glu
TTC
[ENA]
¡û
>W1711116198
LUAV01000007
Alphaproteobacteria
Ensifer aridi [LUAV]
183061
182986
-
Glu
TTC
[ENA]
¡û
>W1711116200
LUAV01000007
Alphaproteobacteria
Ensifer aridi [LUAV]
180234
180159
-
Glu
TTC
[ENA]
¡û
>W1711120300
LUFU01000018
Alphaproteobacteria
Ensifer aridi [LUFU]
184633
184558
-
Glu
TTC
[ENA]
¡û
>W1711120301
LUFU01000018
Alphaproteobacteria
Ensifer aridi [LUFU]
184384
184309
-
Glu
TTC
[ENA]
¡û
>W1711120303
LUFU01000018
Alphaproteobacteria
Ensifer aridi [LUFU]
180711
180636
-
Glu
TTC
[ENA]
¡û
>W1711120342
LUFV01000017
Alphaproteobacteria
Ensifer aridi [LUFV]
3990
3915
-
Glu
TTC
[ENA]
¡û
>W1711120343
LUFV01000017
Alphaproteobacteria
Ensifer aridi [LUFV]
3741
3666
-
Glu
TTC
[ENA]
¡û
>W1711120345
LUFV01000017
Alphaproteobacteria
Ensifer aridi [LUFV]
137
62
-
Glu
TTC
[ENA]
¡û
>W1711120391
LUFW01000022
Alphaproteobacteria
Ensifer aridi [LUFW]
125651
125576
-
Glu
TTC
[ENA]
¡û
>W1711120400
LUFW01000024
Alphaproteobacteria
Ensifer aridi [LUFW]
1565
1490
-
Glu
TTC
[ENA]
¡û
>W1711120401
LUFW01000024
Alphaproteobacteria
Ensifer aridi [LUFW]
1316
1241
-
Glu
TTC
[ENA]
¡û
>W1711120446
LUFX01000016
Alphaproteobacteria
Ensifer aridi [LUFX]
143305
143230
-
Glu
TTC
[ENA]
¡û
>W1711120447
LUFX01000016
Alphaproteobacteria
Ensifer aridi [LUFX]
143056
142981
-
Glu
TTC
[ENA]
¡û
>W1711120449
LUFX01000016
Alphaproteobacteria
Ensifer aridi [LUFX]
139086
139011
-
Glu
TTC
[ENA]
¡û
>W1711233449
LYBW01000051
Alphaproteobacteria
Sinorhizobium alkalisoli YIC4027 [LYBW]
14373
14448
+
Glu
TTC
[ENA]
¡û
>W1711233450
LYBW01000051
Alphaproteobacteria
Sinorhizobium alkalisoli YIC4027 [LYBW]
14663
14738
+
Glu
TTC
[ENA]
¡û
>W1711233452
LYBW01000051
Alphaproteobacteria
Sinorhizobium alkalisoli YIC4027 [LYBW]
15088
15163
+
Glu
TTC
[ENA]
¡û
>W1711318165
MAYB01000001
Alphaproteobacteria
Nitratireductor aquibiodomus [MAYB]
414161
414086
-
Glu
TTC
[ENA]
¡û
>W1711334225
MBQE01000001
Alphaproteobacteria
Stappia indica [MBQE]
558491
558566
+
Glu
TTC
[ENA]
¡û
>W1711334271
MBQF01000001
Alphaproteobacteria
Stappia indica [MBQF]
565143
565218
+
Glu
TTC
[ENA]
¡û
>W1711353250
MDDV01000003
Alphaproteobacteria
Ensifer sp. LCM 4579 [MDDV]
35004
35079
+
Glu
TTC
[ENA]
¡û
>W1711353251
MDDV01000003
Alphaproteobacteria
Ensifer sp. LCM 4579 [MDDV]
35287
35362
+
Glu
TTC
[ENA]
¡û
>W1711353253
MDDV01000003
Alphaproteobacteria
Ensifer sp. LCM 4579 [MDDV]
36670
36745
+
Glu
TTC
[ENA]
¡û
>W1711510432
MLAX01000002
Alphaproteobacteria
Alphaproteobacteria bacterium AO1-B [MLAX]
455559
455484
-
Glu
TTC
[ENA]
¡û
>W1711510442
MLAX01000004
Alphaproteobacteria
Alphaproteobacteria bacterium AO1-B [MLAX]
155445
155520
+
Glu
TTC
[ENA]
¡û
>W1711827029
MXQE01000004
Alphaproteobacteria
Labrenzia sp. CP4 [MXQE]
46681
46606
-
Glu
TTC
[ENA]
¡û
>W1711827055
MXQE01000023
Alphaproteobacteria
Labrenzia sp. CP4 [MXQE]
514566
514641
+
Glu
TTC
[ENA]
¡û
>C171019672
CP013051
Alphaproteobacteria
Sinorhizobium americanum CCGM7 [CP013051]
1687582
1687507
-
Glu
TTC
-
¡û
>C171019674
CP013051
Alphaproteobacteria
Sinorhizobium americanum CCGM7 [CP013051]
1681961
1681886
-
Glu
TTC
-
¡û
>C171021014
CP013107
Alphaproteobacteria
Sinorhizobium americanum CFNEI 73 [CP013107]
1702087
1702012
-
Glu
TTC
-
¡û
>C171021015
CP013107
Alphaproteobacteria
Sinorhizobium americanum CFNEI 73 [CP013107]
1701837
1701762
-
Glu
TTC
-
¡û
>C171021017
CP013107
Alphaproteobacteria
Sinorhizobium americanum CFNEI 73 [CP013107]
1696216
1696141
-
Glu
TTC
-
¡û
>C171097452
CP019630
Alphaproteobacteria
Roseibium aggregatum RMAR6-6 [CP019630]
3545677
3545752
+
Glu
TTC
-
¡û
>C171097468
CP019630
Alphaproteobacteria
Roseibium aggregatum RMAR6-6 [CP019630]
5925315
5925390
+
Glu
TTC
-
¡û
>C171117292
CP021219
Alphaproteobacteria
Sinorhizobium meliloti RU11/001 [CP021219]
3143509
3143434
-
Glu
TTC
-
¡û
>C171117293
CP021219
Alphaproteobacteria
Sinorhizobium meliloti RU11/001 [CP021219]
3143216
3143141
-
Glu
TTC
-
¡û
>C171117295
CP021219
Alphaproteobacteria
Sinorhizobium meliloti RU11/001 [CP021219]
3142827
3142752
-
Glu
TTC
-
¡û
>C171123399
CP021797
Alphaproteobacteria
Sinorhizobium meliloti USDA1106 [CP021797]
3470216
3470141
-
Glu
TTC
-
¡û
>C171123400
CP021797
Alphaproteobacteria
Sinorhizobium meliloti USDA1106 [CP021797]
3469923
3469848
-
Glu
TTC
-
¡û
>C171123402
CP021797
Alphaproteobacteria
Sinorhizobium meliloti USDA1106 [CP021797]
3469534
3469459
-
Glu
TTC
-
¡û
>C171123541
CP021808
Alphaproteobacteria
Sinorhizobium meliloti Rm41 [CP021808]
646802
646877
+
Glu
TTC
-
¡û
>C171123542
CP021808
Alphaproteobacteria
Sinorhizobium meliloti Rm41 [CP021808]
647095
647170
+
Glu
TTC
-
¡û
>C171123544
CP021808
Alphaproteobacteria
Sinorhizobium meliloti Rm41 [CP021808]
647484
647559
+
Glu
TTC
-
¡û
>C171123655
CP021818
Alphaproteobacteria
Sinorhizobium meliloti M162 [CP021818]
1956265
1956340
+
Glu
TTC
-
¡û
>C171123656
CP021818
Alphaproteobacteria
Sinorhizobium meliloti M162 [CP021818]
1956558
1956633
+
Glu
TTC
-
¡û
>C171123658
CP021818
Alphaproteobacteria
Sinorhizobium meliloti M162 [CP021818]
1956947
1957022
+
Glu
TTC
-
¡û
>W131162657
AQZC01000011
Alphaproteobacteria
Sinorhizobium medicae WSM1115 [AQZC]
262915
262840
-
Glu
TTC
[ENA]
¡û
>W131162660
AQZC01000011
Alphaproteobacteria
Sinorhizobium medicae WSM1115 [AQZC]
200154
200079
-
Glu
TTC
[ENA]
¡û
>W131163307
AQZQ01000005
Alphaproteobacteria
Ensifer sp. BR816 BR816 [AQZQ]
1356755
1356830
+
Glu
TTC
[ENA]
¡û
>W131163317
AQZQ01000005
Alphaproteobacteria
Ensifer sp. BR816 BR816 [AQZQ]
1361016
1360941
-
Glu
TTC
[ENA]
¡û
>W131213940
ATTK01000027
Alphaproteobacteria
Sinorhizobium meliloti MVII-I [ATTK]
53027
52952
-
Glu
TTC
[ENA]
¡û
>W131213941
ATTK01000027
Alphaproteobacteria
Sinorhizobium meliloti MVII-I [ATTK]
52734
52659
-
Glu
TTC
[ENA]
¡û
>W131213943
ATTK01000027
Alphaproteobacteria
Sinorhizobium meliloti MVII-I [ATTK]
52345
52270
-
Glu
TTC
[ENA]
¡û
>W131220101
ATZC01000018
Alphaproteobacteria
Sinorhizobium meliloti GVPV12 [ATZC]
15445
15520
+
Glu
TTC
[ENA]
¡û
>W131220102
ATZC01000018
Alphaproteobacteria
Sinorhizobium meliloti GVPV12 [ATZC]
15738
15813
+
Glu
TTC
[ENA]
¡û
>W131220104
ATZC01000018
Alphaproteobacteria
Sinorhizobium meliloti GVPV12 [ATZC]
16127
16202
+
Glu
TTC
[ENA]
¡û
>C022818
AL591688
Alphaproteobacteria
Sinorhizobium meliloti 1021 [AL591688]
1862108
1862183
+
Glu
TTC
[Ensembl]
¡û
>C022819
AL591688
Alphaproteobacteria
Sinorhizobium meliloti 1021 [AL591688]
1862401
1862476
+
Glu
TTC
[Ensembl]
¡û
>C022821
AL591688
Alphaproteobacteria
Sinorhizobium meliloti 1021 [AL591688]
1862790
1862865
+
Glu
TTC
[Ensembl]
¡û
>w020428
AAUW01000004
Alphaproteobacteria
Roseibium aggregatum IAM 12614 [AAUW]
83766
83689
-
Glu
TTC
[ENA]
¡û
>w020421
AAUW01000002
Alphaproteobacteria
Roseibium aggregatum IAM 12614 [AAUW]
175248
175171
-
Glu
TTC
[ENA]
¡û
>w018763
AATP01000002
Alphaproteobacteria
Fulvimarina pelagi HTCC2506 [AATP]
738899
738976
+
Glu
TTC
[ENA]
¡û
>W141041982
AMCX01000007
Alphaproteobacteria
Sinorhizobium fredii GR64 [AMCX]
34675
34750
+
Glu
TTC
[ENA]
¡û
>WENV181166699
OEIU01001215
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
11181
11106
-
Glu
TTC
[ENA]
¢þ
>WENV181416769
OGCL01142658
[OGCL] hot springs metagenome; Hot spring water
368
443
+
Glu
TTC
[ENA]
¢þ
>W141152630
AXBY01000007
Alphaproteobacteria
Labrenzia sp. C1B10 [AXBY]
13995
14070
+
Glu
TTC
[ENA]
¡û
>W141152655
AXBY01000069
Alphaproteobacteria
Labrenzia sp. C1B10 [AXBY]
73547
73472
-
Glu
TTC
[ENA]
¡û
>W141152927
AXCE01000010
Alphaproteobacteria
Labrenzia sp. C1B70 [AXCE]
229176
229251
+
Glu
TTC
[ENA]
¡û
>W141152935
AXCE01000014
Alphaproteobacteria
Labrenzia sp. C1B70 [AXCE]
13998
14073
+
Glu
TTC
[ENA]
¡û
>W141200759
AYYG01000017
Alphaproteobacteria
Labrenzia sp. DG1229 [AYYG]
56489
56564
+
Glu
TTC
[ENA]
¡û
>W141207597
AZNX01000002
Alphaproteobacteria
Ensifer aridi TW10 [AZNX]
573543
573618
+
Glu
TTC
[ENA]
¡û
>W141207598
AZNX01000002
Alphaproteobacteria
Ensifer aridi TW10 [AZNX]
573792
573867
+
Glu
TTC
[ENA]
¡û
>W141207600
AZNX01000002
Alphaproteobacteria
Ensifer aridi TW10 [AZNX]
577762
577837
+
Glu
TTC
[ENA]
¡û
>W141216416
AZUW01000004
Alphaproteobacteria
Ensifer sp. WSM1721 [AZUW]
123034
123109
+
Glu
TTC
[ENA]
¡û
>W141216421
AZUW01000005
Alphaproteobacteria
Ensifer sp. WSM1721 [AZUW]
9
84
+
Glu
TTC
[ENA]
¡û
>W141216423
AZUW01000005
Alphaproteobacteria
Ensifer sp. WSM1721 [AZUW]
358
433
+
Glu
TTC
[ENA]
¡û
>W141229379
BAMP01000070
Alphaproteobacteria
Nitratireductor aquibiodomus JCM 21793 [BAMP]
16956
16881
-
Glu
TTC
[ENA]
¡û
>WENV183631492
OOGU01133649
[OOGU] marine metagenome; sea ice
456
381
-
Glu
TTC
[ENA]
¢þ
>WENV170199151
CEPL01080458
[CEPL] marine metagenome genome assembly TARA_045_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
240
165
-
Glu
TTC
[ENA]
¢þ
>WENV170672341
LAZR01000065
[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
145847
145772
-
Glu
TTC
[ENA]
¢þ
>WENV170728270
LULE01016474
[LULE] marine metagenome; Red Sea water column Station 192 - depth 10m
311
236
-
Glu
TTC
[ENA]
¢þ
>WENV170779785
LZQR01000617
[LZQR] oil field metagenome; sample BH-FW-24 from oil reservoir
3923
3848
-
Glu
TTC
[ENA]
¢þ
>WENV170813224
MDSW01196246
[MDSW] marine metagenome; seawater
983
908
-
Glu
TTC
[ENA]
¢þ
>W141461516
JFGO01000037
Alphaproteobacteria
Sinorhizobium americanum CCGM7 [JFGO]
524555
524630
+
Glu
TTC
[ENA]
¡û
>W141461518
JFGO01000037
Alphaproteobacteria
Sinorhizobium americanum CCGM7 [JFGO]
530176
530251
+
Glu
TTC
[ENA]
¡û
>WENV170836813
MDSZ01137935
[MDSZ] marine metagenome; seawater
17096
17021
-
Glu
TTC
[ENA]
¢þ
>WENV170843399
MDSZ01259470
[MDSZ] marine metagenome; seawater
13802
13727
-
Glu
TTC
[ENA]
¢þ
>WENV170849774
MDTA01102142
[MDTA] marine metagenome; seawater
438
363
-
Glu
TTC
[ENA]
¢þ
>WENV170895272
MDTD01077213
[MDTD] marine metagenome; seawater
595
520
-
Glu
TTC
[ENA]
¢þ
>WENV170962389
MRWF01014589
[MRWF] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell
42
117
+
Glu
TTC
[ENA]
¢þ
>WENV170962543
MRWF01020006
[MRWF] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell
4287
4212
-
Glu
TTC
[ENA]
¢þ
>WENV170962988
MRWF01032067
[MRWF] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell
160011
159936
-
Glu
TTC
[ENA]
¢þ
>WENV170963720
MRWG01000590
[MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell
89515
89590
+
Glu
TTC
[ENA]
¢þ
>WENV170963918
MRWG01001361
[MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell
4694
4769
+
Glu
TTC
[ENA]
¢þ
>WENV170964079
MRWG01002737
[MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell
19916
19841
-
Glu
TTC
[ENA]
¢þ
>WENV170964313
MRWG01007918
[MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell
3162
3087
-
Glu
TTC
[ENA]
¢þ
>WENV170964317
MRWG01007971
[MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell
11
86
+
Glu
TTC
[ENA]
¢þ
>C181038030
CP019584
Alphaproteobacteria
Sinorhizobium meliloti [CP019584]
1918152
1918227
+
Glu
TTC
-
¡û
>C181038031
CP019584
Alphaproteobacteria
Sinorhizobium meliloti [CP019584]
1918445
1918520
+
Glu
TTC
-
¡û
>C181038033
CP019584
Alphaproteobacteria
Sinorhizobium meliloti [CP019584]
1918834
1918909
+
Glu
TTC
-
¡û
>C181067734
CP022529
Alphaproteobacteria
Labrenzia sp. VG12 [CP022529]
3419856
3419781
-
Glu
TTC
-
¡û
>C181067752
CP022529
Alphaproteobacteria
Labrenzia sp. VG12 [CP022529]
1031971
1031896
-
Glu
TTC
-
¡û
>C181075751
CP023063
Alphaproteobacteria
Sinorhizobium sp. CCBAU 05631 [CP023063]
1301529
1301454
-
Glu
TTC
-
¡û
>C181075753
CP023063
Alphaproteobacteria
Sinorhizobium sp. CCBAU 05631 [CP023063]
1297155
1297080
-
Glu
TTC
-
¡û
>C181075801
CP023067
Alphaproteobacteria
Sinorhizobium sojae CCBAU 05684 [CP023067]
1368372
1368297
-
Glu
TTC
-
¡û
>C181075802
CP023067
Alphaproteobacteria
Sinorhizobium sojae CCBAU 05684 [CP023067]
1368083
1368008
-
Glu
TTC
-
¡û
>C181075804
CP023067
Alphaproteobacteria
Sinorhizobium sojae CCBAU 05684 [CP023067]
1367660
1367585
-
Glu
TTC
-
¡û
>C181075857
CP023070
Alphaproteobacteria
Sinorhizobium fredii CCBAU 83666 [CP023070]
1301941
1301866
-
Glu
TTC
-
¡û
>C181099222
CP024307
Alphaproteobacteria
Sinorhizobium fredii NXT3 [CP024307]
1700404
1700329
-
Glu
TTC
-
¡û
>C181099224
CP024307
Alphaproteobacteria
Sinorhizobium fredii NXT3 [CP024307]
1696037
1695962
-
Glu
TTC
-
¡û
>C181176148
CP029208
Alphaproteobacteria
Nitratireductor sp. OM-1 [CP029208]
3359996
3360071
+
Glu
TTC
-
¡û
>C181176277
CP029231
Alphaproteobacteria
Sinorhizobium fredii CCBAU 45436 [CP029231]
1337514
1337439
-
Glu
TTC
-
¡û
>C181178657
CP029451
Alphaproteobacteria
Sinorhizobium fredii CCBAU 25509 [CP029451]
1518850
1518775
-
Glu
TTC
-
¡û
>C191152272
CP036532
Alphaproteobacteria
Roseitalea porphyridii MA7-20 [CP036532]
2107777
2107852
+
Glu
TTC
-
¡û
>W09118247
ACCU01000008
Alphaproteobacteria
Roseibium alexandrii DFL-11 [ACCU]
35728
35803
+
Glu
TTC
[ENA]
¡û
>W09118277
ACCU01000015
Alphaproteobacteria
Roseibium alexandrii DFL-11 [ACCU]
485026
484951
-
Glu
TTC
[ENA]
¡û
>W1910182977
BJNI01000004
Alphaproteobacteria
Sinorhizobium fredii NBRC 14780 [BJNI]
232934
232859
-
Glu
TTC
[ENA]
¡û
>W1910285125
FREW01000001
Alphaproteobacteria
Labrenzia sp. Alg231-36 [FREW]
19496
19571
+
Glu
TTC
[ENA]
¡û
>W1910285165
FREW01000010
Alphaproteobacteria
Labrenzia sp. Alg231-36 [FREW]
254336
254411
+
Glu
TTC
[ENA]
¡û
>C09108799
CP001389
Alphaproteobacteria
Sinorhizobium fredii NGR234 [CP001389]
1451275
1451200
-
Glu
TTC
[Ensembl]
¡û
>W1910636507
LODU01000001
Alphaproteobacteria
Sinorhizobium americanum FG01 [LODU]
30197
30272
+
Glu
TTC
[ENA]
¡û
>W1910636509
LODU01000001
Alphaproteobacteria
Sinorhizobium americanum FG01 [LODU]
34571
34646
+
Glu
TTC
[ENA]
¡û
>W1910636566
LODV01000012
Alphaproteobacteria
Sinorhizobium americanum NG07B [LODV]
1838197
1838272
+
Glu
TTC
[ENA]
¡û
>W1910636568
LODV01000012
Alphaproteobacteria
Sinorhizobium americanum NG07B [LODV]
1842570
1842645
+
Glu
TTC
[ENA]
¡û
>W1910658179
MBFK01000006
Alphaproteobacteria
Sinorhizobium shofinae CCBAU 251167 [MBFK]
17298
17223
-
Glu
TTC
[ENA]
¡û
>W1910658180
MBFK01000006
Alphaproteobacteria
Sinorhizobium shofinae CCBAU 251167 [MBFK]
17048
16973
-
Glu
TTC
[ENA]
¡û
>W1910658182
MBFK01000006
Alphaproteobacteria
Sinorhizobium shofinae CCBAU 251167 [MBFK]
16721
16646
-
Glu
TTC
[ENA]
¡û
>W1910856398
NBUB01000011
Alphaproteobacteria
Sinorhizobium medicae Str17 [NBUB]
137400
137325
-
Glu
TTC
[ENA]
¡û
>W1910856399
NBUB01000011
Alphaproteobacteria
Sinorhizobium medicae Str17 [NBUB]
76898
76823
-
Glu
TTC
[ENA]
¡û
>W1910856401
NBUB01000011
Alphaproteobacteria
Sinorhizobium medicae Str17 [NBUB]
76437
76362
-
Glu
TTC
[ENA]
¡û
>W1910856402
NBUB01000011
Alphaproteobacteria
Sinorhizobium medicae Str17 [NBUB]
76337
76262
-
Glu
TTC
[ENA]
¡û
>W1910856453
NBUC01000045
Alphaproteobacteria
Sinorhizobium medicae Str16 [NBUC]
439
364
-
Glu
TTC
[ENA]
¡û
>W1910856454
NBUC01000045
Alphaproteobacteria
Sinorhizobium medicae Str16 [NBUC]
82
7
-
Glu
TTC
[ENA]
¡û
>W1910856461
NBUC01000065
Alphaproteobacteria
Sinorhizobium medicae Str16 [NBUC]
29969
30044
+
Glu
TTC
[ENA]
¡û
>W1910856469
NBUC01000083
Alphaproteobacteria
Sinorhizobium medicae Str16 [NBUC]
71438
71363
-
Glu
TTC
[ENA]
¡û
>W1910856759
NBUI01000096
Alphaproteobacteria
Sinorhizobium medicae Str10 [NBUI]
33699
33624
-
Glu
TTC
[ENA]
¡û
>W1910856760
NBUI01000103
Alphaproteobacteria
Sinorhizobium medicae Str10 [NBUI]
31593
31668
+
Glu
TTC
[ENA]
¡û
>W1910856762
NBUI01000103
Alphaproteobacteria
Sinorhizobium medicae Str10 [NBUI]
31985
32060
+
Glu
TTC
[ENA]
¡û
>W1910857059
NBUP01000062
Alphaproteobacteria
Sinorhizobium medicae Str3 [NBUP]
30157
30082
-
Glu
TTC
[ENA]
¡û
>W1910857062
NBUP01000062
Alphaproteobacteria
Sinorhizobium medicae Str3 [NBUP]
29684
29609
-
Glu
TTC
[ENA]
¡û
>W1910857137
NBUQ01000208
Alphaproteobacteria
Sinorhizobium medicae Str1 [NBUQ]
47806
47881
+
Glu
TTC
[ENA]
¡û
>W1911409656
NWTB01000011
Alphaproteobacteria
Sinorhizobium sp. FG01 [NWTB]
29948
30023
+
Glu
TTC
[ENA]
¡û
>W1911409657
NWTB01000011
Alphaproteobacteria
Sinorhizobium sp. FG01 [NWTB]
30197
30272
+
Glu
TTC
[ENA]
¡û
>W1911409659
NWTB01000011
Alphaproteobacteria
Sinorhizobium sp. FG01 [NWTB]
34571
34646
+
Glu
TTC
[ENA]
¡û
>W1911409703
NWTC01000018
Alphaproteobacteria
Sinorhizobium fredii PCH1 [NWTC]
53124
53199
+
Glu
TTC
[ENA]
¡û
>W1911409731
NWTD01000001
Alphaproteobacteria
Sinorhizobium sp. NG07B [NWTD]
1838197
1838272
+
Glu
TTC
[ENA]
¡û
>W1911409733
NWTD01000001
Alphaproteobacteria
Sinorhizobium sp. NG07B [NWTD]
1842570
1842645
+
Glu
TTC
[ENA]
¡û
>W1911409968
NWTH01000026
Alphaproteobacteria
Sinorhizobium sp. BJ1 [NWTH]
96895
96820
-
Glu
TTC
[ENA]
¡û
>W1911409970
NWTH01000026
Alphaproteobacteria
Sinorhizobium sp. BJ1 [NWTH]
93364
93289
-
Glu
TTC
[ENA]
¡û
>W1911494900
OBML01000013
Alphaproteobacteria
Stappia indica USBA 352 [OBML]
35175
35250
+
Glu
TTC
[ENA]
¡û
>W1911532366
OGUZ01000001
Alphaproteobacteria
Labrenzia sp. EL143 [OGUZ]
252163
252238
+
Glu
TTC
[ENA]
¡û
>W1911532405
OGUZ01000023
Alphaproteobacteria
Labrenzia sp. EL143 [OGUZ]
4053
4128
+
Glu
TTC
[ENA]
¡û
>W1810232556
PPCN01000009
Alphaproteobacteria
Roseibium marinum DSM 17023 [PPCN]
61264
61189
-
Glu
TTC
[ENA]
¡û
>W1810232560
PPCN01000013
Alphaproteobacteria
Roseibium marinum DSM 17023 [PPCN]
12840
12915
+
Glu
TTC
[ENA]
¡û
>W1810394309
PYBP01000001
Alphaproteobacteria
Nitratireductor sp. StC3 [PYBP]
95642
95567
-
Glu
TTC
[ENA]
¡û
>W1810592116
QFWV01000019
Alphaproteobacteria
Oceaniradius stylonematis StC1 [QFWV]
61895
61970
+
Glu
TTC
[ENA]
¡û
>W1810606059
QGNX01000002
Alphaproteobacteria
Oceanibium sediminis O448 [QGNX]
275652
275727
+
Glu
TTC
[ENA]
¡û
>W1810889079
QURL01000005
Alphaproteobacteria
Fulvimarina endophytica 85 [QURL]
350596
350671
+
Glu
TTC
[ENA]
¡û
>C151044695
CP009144
Alphaproteobacteria
Sinorhizobium meliloti RMO17 [CP009144]
1896478
1896553
+
Glu
TTC
[Ensembl]
¡û
>C151044696
CP009144
Alphaproteobacteria
Sinorhizobium meliloti RMO17 [CP009144]
1896771
1896846
+
Glu
TTC
[Ensembl]
¡û
>C151044698
CP009144
Alphaproteobacteria
Sinorhizobium meliloti RMO17 [CP009144]
1897160
1897235
+
Glu
TTC
[Ensembl]
¡û
>C11120838
CP002740
Alphaproteobacteria
Sinorhizobium meliloti BL225C [CP002740]
1527358
1527433
+
Glu
TTC
[Ensembl]
¡û
>C11120839
CP002740
Alphaproteobacteria
Sinorhizobium meliloti BL225C [CP002740]
1527651
1527726
+
Glu
TTC
[Ensembl]
¡û
>C11120841
CP002740
Alphaproteobacteria
Sinorhizobium meliloti BL225C [CP002740]
1528040
1528115
+
Glu
TTC
[Ensembl]
¡û
>W11135842
AEFL01000019
Alphaproteobacteria
Roseibium sp. TrichSKD4 [AEFL]
2189
2114
-
Glu
TTC
[ENA]
¡û
>W11135871
AEFL01000067
Alphaproteobacteria
Roseibium sp. TrichSKD4 [AEFL]
51777
51852
+
Glu
TTC
[ENA]
¡û
>W1511555763
JZXD01000014
Alphaproteobacteria
Sinorhizobium meliloti L5-30 [JZXD]
55392
55467
+
Glu
TTC
[ENA]
¡û
>W1511555764
JZXD01000014
Alphaproteobacteria
Sinorhizobium meliloti L5-30 [JZXD]
55685
55760
+
Glu
TTC
[ENA]
¡û
>W1511555766
JZXD01000014
Alphaproteobacteria
Sinorhizobium meliloti L5-30 [JZXD]
56074
56149
+
Glu
TTC
[ENA]
¡û
>W1511582662
LATE01000042
Alphaproteobacteria
Sinorhizobium sp. PC2 [LATE]
12424
12349
-
Glu
TTC
[ENA]
¡û
>W1511582683
LATE01000099
Alphaproteobacteria
Sinorhizobium sp. PC2 [LATE]
2958
3033
+
Glu
TTC
[ENA]
¡û
>W1511582684
LATE01000099
Alphaproteobacteria
Sinorhizobium sp. PC2 [LATE]
3207
3282
+
Glu
TTC
[ENA]
¡û
>W1511582686
LATE01000100
Alphaproteobacteria
Sinorhizobium sp. PC2 [LATE]
6195
6270
+
Glu
TTC
[ENA]
¡û
>W1511582687
LATE01000100
Alphaproteobacteria
Sinorhizobium sp. PC2 [LATE]
6444
6519
+
Glu
TTC
[ENA]
¡û
>W1511582721
LATE01000157
Alphaproteobacteria
Sinorhizobium sp. PC2 [LATE]
604280
604355
+
Glu
TTC
[ENA]
¡û
>C121018163
HE616890
Alphaproteobacteria
Sinorhizobium fredii HH103 [HE616890]
1402209
1402134
-
Glu
TTC
[Ensembl]
¡û
>C161037907
CP011927
Alphaproteobacteria
Labrenzia sp. CP4 [CP011927]
1050764
1050839
+
Glu
TTC
-
¡û
>C161037923
CP011927
Alphaproteobacteria
Labrenzia sp. CP4 [CP011927]
3379239
3379314
+
Glu
TTC
-
¡û
>W121066025
AJQM01000245
Alphaproteobacteria
Sinorhizobium fredii CCBAU 05557 [AJQM]
5525
5600
+
Glu
TTC
[ENA]
¡û
>W121066052
AJQN01000086
Alphaproteobacteria
Sinorhizobium fredii CCBAU 25509 [AJQN]
12711
12786
+
Glu
TTC
[ENA]
¡û
>W121066103
AJQO01000073
Alphaproteobacteria
Sinorhizobium fredii CCBAU 45436 [AJQO]
13240
13315
+
Glu
TTC
[ENA]
¡û
>W121066148
AJQP01000040
Alphaproteobacteria
Sinorhizobium fredii CCBAU 83622 [AJQP]
108501
108426
-
Glu
TTC
[ENA]
¡û
>W121066238
AJQR01000068
Alphaproteobacteria
Sinorhizobium fredii CCBAU 83666 [AJQR]
227
302
+
Glu
TTC
[ENA]
¡û
>W121066301
AJQS01000097
Alphaproteobacteria
Sinorhizobium fredii CCBAU 83753 [AJQS]
1627
1702
+
Glu
TTC
[ENA]
¡û
>W121066355
AJQT01000044
Alphaproteobacteria
Sinorhizobium sojae CCBAU 05684 [AJQT]
305
380
+
Glu
TTC
[ENA]
¡û
>W121066405
AJQU01000080
Alphaproteobacteria
Sinorhizobium sp. CCBAU 05631 [AJQU]
10495
10570
+
Glu
TTC
[ENA]
¡û
>W121071483
AJXZ01000020
Alphaproteobacteria
Nitratireductor aquibiodomus RA22 [AJXZ]
73946
74021
+
Glu
TTC
[ENA]
¡û
>W121103683
AKZT01000305
Alphaproteobacteria
Sinorhizobium meliloti C0431A [AKZT]
11478
11403
-
Glu
TTC
[ENA]
¡û
>W121103685
AKZT01000305
Alphaproteobacteria
Sinorhizobium meliloti C0431A [AKZT]
11089
11014
-
Glu
TTC
[ENA]
¡û
>W121103791
AKZV01000377
Alphaproteobacteria
Sinorhizobium meliloti AK11 [AKZV]
11
86
+
Glu
TTC
[ENA]
¡û
>W121103793
AKZV01000377
Alphaproteobacteria
Sinorhizobium meliloti AK11 [AKZV]
400
475
+
Glu
TTC
[ENA]
¡û
>W121103796
AKZV01000380
Alphaproteobacteria
Sinorhizobium meliloti AK11 [AKZV]
76
1
-
Glu
TTC
[ENA]
¡û
>W1610024832
AUTC01000199
Alphaproteobacteria
Sinorhizobium fredii USDA 205 [AUTC]
232974
232899
-
Glu
TTC
[ENA]
¡û
>W1610056832
BBWO01000023
Alphaproteobacteria
Fulvimarina pelagi [BBWO]
27721
27646
-
Glu
TTC
[ENA]
¡û
>W1610091995
CXST01000001
Alphaproteobacteria
Roseibium aggregatum aggregata [CXST]
568111
568036
-
Glu
TTC
[ENA]
¡û
>W1610092016
CXST01000005
Alphaproteobacteria
Roseibium aggregatum aggregata [CXST]
229559
229634
+
Glu
TTC
[ENA]
¡û
>W1610092078
CXTY01000014
Alphaproteobacteria
Roseibium album alba [CXTY]
104087
104162
+
Glu
TTC
[ENA]
¡û
>W1610092091
CXTY01000017
Alphaproteobacteria
Roseibium album alba [CXTY]
88840
88765
-
Glu
TTC
[ENA]
¡û
>W1610092112
CXWA01000001
Alphaproteobacteria
Roseibium album alba [CXWA]
249252
249327
+
Glu
TTC
[ENA]
¡û
>W1610092142
CXWA01000011
Alphaproteobacteria
Roseibium album alba [CXWA]
11297
11372
+
Glu
TTC
[ENA]
¡û
>W1610092175
CXWC01000010
Alphaproteobacteria
Roseibium album alba [CXWC]
663243
663168
-
Glu
TTC
[ENA]
¡û
>W1610092197
CXWC01000021
Alphaproteobacteria
Roseibium album alba [CXWC]
66867
66792
-
Glu
TTC
[ENA]
¡û
>W1610092204
CXWD01000001
Alphaproteobacteria
Roseibium alexandrii [CXWD]
92227
92152
-
Glu
TTC
[ENA]
¡û
>W1610092223
CXWD01000012
Alphaproteobacteria
Roseibium alexandrii [CXWD]
155274
155349
+
Glu
TTC
[ENA]
¡û
>W1610092250
CXWE01000002
Alphaproteobacteria
Roseibium album alba [CXWE]
663243
663168
-
Glu
TTC
[ENA]
¡û
>W1610092264
CXWE01000006
Alphaproteobacteria
Roseibium album alba [CXWE]
11607
11682
+
Glu
TTC
[ENA]
¡û
>W121066407
AJQU01000080
Alphaproteobacteria
Sinorhizobium sp. CCBAU 05631 [AJQU]
14869
14944
+
Glu
TTC
[ENA]
¡û
>WENV069155
AACY023754896
Marine microbial communities from Global Ocean Sampling (GOS)
1380
1303
-
Glu
TTC
[ENA]
>W1610767319
LNQB01000072
Alphaproteobacteria
Sinorhizobium saheli [LNQB]
98288
98363
+
Glu
TTC
[ENA]
¡û
>W1610767320
LNQB01000072
Alphaproteobacteria
Sinorhizobium saheli [LNQB]
98540
98615
+
Glu
TTC
[ENA]
¡û
>W1610767322
LNQB01000072
Alphaproteobacteria
Sinorhizobium saheli [LNQB]
108571
108646
+
Glu
TTC
[ENA]
¡û
>W1610767380
LNQC01000056
Alphaproteobacteria
Sinorhizobium americanum [LNQC]
64695
64620
-
Glu
TTC
[ENA]
¡û
>W1610767382
LNQC01000056
Alphaproteobacteria
Sinorhizobium americanum [LNQC]
59074
58999
-
Glu
TTC
[ENA]
¡û
>W1610842694
LPUX01000068
Alphaproteobacteria
Sinorhizobium glycinis [LPUX]
192767
192692
-
Glu
TTC
[ENA]
¡û
>W1610842695
LPUX01000068
Alphaproteobacteria
Sinorhizobium glycinis [LPUX]
192442
192367
-
Glu
TTC
[ENA]
¡û
>W1610842697
LPUX01000068
Alphaproteobacteria
Sinorhizobium glycinis [LPUX]
192063
191988
-
Glu
TTC
[ENA]
¡û
>W1611061583
MAYB01000001
Alphaproteobacteria
Nitratireductor aquibiodomus [MAYB]
414161
414086
-
Glu
TTC
[ENA]
¡û
>W1611066192
MBQE01000001
Alphaproteobacteria
Stappia indica [MBQE]
558491
558566
+
Glu
TTC
[ENA]
¡û
>W1611066238
MBQF01000001
Alphaproteobacteria
Stappia indica [MBQF]
565143
565218
+
Glu
TTC
[ENA]
¡û
>W1710021273
AUTC01000199
Alphaproteobacteria
Sinorhizobium fredii USDA 205 [AUTC]
232974
232899
-
Glu
TTC
[ENA]
¡û
>W1710053531
BBWO01000023
Alphaproteobacteria
Fulvimarina pelagi [BBWO]
27721
27646
-
Glu
TTC
[ENA]
¡û
>W1710095352
CXST01000001
Alphaproteobacteria
Roseibium aggregatum aggregata [CXST]
568111
568036
-
Glu
TTC
[ENA]
¡û
>W1710095373
CXST01000005
Alphaproteobacteria
Roseibium aggregatum aggregata [CXST]
229559
229634
+
Glu
TTC
[ENA]
¡û
>W1710095435
CXTY01000014
Alphaproteobacteria
Roseibium album alba [CXTY]
104087
104162
+
Glu
TTC
[ENA]
¡û
>W1710095448
CXTY01000017
Alphaproteobacteria
Roseibium album alba [CXTY]
88840
88765
-
Glu
TTC
[ENA]
¡û
>W1710095469
CXWA01000001
Alphaproteobacteria
Roseibium album alba [CXWA]
249252
249327
+
Glu
TTC
[ENA]
¡û
>W1710095499
CXWA01000011
Alphaproteobacteria
Roseibium album alba [CXWA]
11297
11372
+
Glu
TTC
[ENA]
¡û
>W1710095532
CXWC01000010
Alphaproteobacteria
Roseibium album alba [CXWC]
663243
663168
-
Glu
TTC
[ENA]
¡û
>W1710095554
CXWC01000021
Alphaproteobacteria
Roseibium album alba [CXWC]
66867
66792
-
Glu
TTC
[ENA]
¡û
>W1710095561
CXWD01000001
Alphaproteobacteria
Roseibium alexandrii [CXWD]
92227
92152
-
Glu
TTC
[ENA]
¡û
>W1710095580
CXWD01000012
Alphaproteobacteria
Roseibium alexandrii [CXWD]
155274
155349
+
Glu
TTC
[ENA]
¡û
>W1710095607
CXWE01000002
Alphaproteobacteria
Roseibium album alba [CXWE]
663243
663168
-
Glu
TTC
[ENA]
¡û
>W1710095621
CXWE01000006
Alphaproteobacteria
Roseibium album alba [CXWE]
11607
11682
+
Glu
TTC
[ENA]
¡û
>W1710530183
FNOO01000006
Alphaproteobacteria
Sinorhizobium meliloti [FNOO]
4928
5003
+
Glu
TTC
[ENA]
¡û
>W1710530184
FNOO01000006
Alphaproteobacteria
Sinorhizobium meliloti [FNOO]
5221
5296
+
Glu
TTC
[ENA]
¡û
>W1710530186
FNOO01000006
Alphaproteobacteria
Sinorhizobium meliloti [FNOO]
5610
5685
+
Glu
TTC
[ENA]
¡û
>W1710535282
FNSL01000001
Alphaproteobacteria
Nitratireductor aquibiodomus ES.061 [FNSL]
697730
697805
+
Glu
TTC
[ENA]
¡û
>W1710564184
FOQH01000007
Alphaproteobacteria
Albimonas pacifica [FOQH]
399374
399449
+
Glu
TTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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