This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.238153 (13 seq.)
>W1712041343
NFKZ01000032
Bacillota
Lactobacillus gallinarum [NFKZ]
17637
17713
+
Thr
CGT
[ENA]
¡û
>W1712042237
NFLP01000006
Bacillota
Lactobacillus gallinarum [NFLP]
89903
89827
-
Thr
CGT
[ENA]
¡û
>W1712042393
NFLS01000003
Bacillota
Lactobacillus gallinarum [NFLS]
17821
17897
+
Thr
CGT
[ENA]
¡û
>W1712042780
NFLZ01000001
Bacillota
Lactobacillus gallinarum [NFLZ]
132860
132784
-
Thr
CGT
[ENA]
¡û
>W141244167
CAKD01000002
Bacillota
Lactobacillus pasteurii CRBIP 24.76 [CAKD]
64582
64507
-
Thr
CGT
[ENA]
¡û
>W1911569389
PCYT01000030
Bacillota
Lactobacillus sp. UMNPBX17 [PCYT]
188
261
+
Thr
CGT
[ENA]
¡û
>W1911569560
PCYW01000034
Bacillota
Lactobacillus sp. UMNPBX14 [PCYW]
1772
1847
+
Thr
CGT
[ENA]
¡û
>W1911569958
PCZD01000034
Bacillota
Lactobacillus sp. UMNPBX6 [PCZD]
1772
1847
+
Thr
CGT
[ENA]
¡û
>W1911570070
PCZF01000036
Bacillota
Lactobacillus sp. UMNPBX4 [PCZF]
188
261
+
Thr
CGT
[ENA]
¡û
>W1911632233
PUFQ01000014
Bacillota
Lactobacillus pasteurii DSM 23907 [PUFQ]
15121
15193
+
Thr
CGT
[ENA]
¡û
>W1610032337
AYZN01000014
Bacillota
Lactobacillus pasteurii DSM 23907 = CRBIP 24.76 [AYZN]
18304
18229
-
Thr
CGT
[ENA]
¡û
>W1610035375
AZEL01000053
Bacillota
Lactobacillus gallinarum DSM 10532 = JCM 2011 [AZEL]
34276
34352
+
Thr
CGT
[ENA]
¡û
>W1710032414
AZEL01000053
Bacillota
Lactobacillus gallinarum DSM 10532 = JCM 2011 [AZEL]
34276
34352
+
Thr
CGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK