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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.238739 (14 seq.)
>W1711007453
LQPE01000052
Actinomycetota
Mycobacterium kyorinense [LQPE]
1456
1531
+
Gln
TTG
[ENA]
¡û
>W1711772528
MVHL01000043
Actinomycetota
Mycobacterium bouchedurhonense [MVHL]
34169
34094
-
Gln
TTG
[ENA]
¡û
>W1711773748
MVIL01000702
Actinomycetota
Mycobacterium timonense [MVIL]
224
149
-
Gln
TTG
[ENA]
¡û
>WENV181166064
OEIS01414365
[OEIS] soil metagenome; soil
74
-1
-
Gln
TTG
[ENA]
¢þ
>W1910598874
LBGZ01000006
Actinomycetota
Mycobacterium avium subsp. hominissuis OCU466 [LBGZ]
29821
29747
-
Gln
TTG
[ENA]
¡û
>W1910658366
MBFQ01000039
Actinomycetota
Mycobacterium avium subsp. hominissuis OCU462 [MBFQ]
8813
8739
-
Gln
TTG
[ENA]
¡û
>W1710085446
BDNJ01000010
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDNJ]
23392
23467
+
Gln
TTG
[ENA]
¡û
>W1710085697
BDNN01000187
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDNN]
966
891
-
Gln
TTG
[ENA]
¡û
>W1710086101
BDNW01000057
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDNW]
2836
2911
+
Gln
TTG
[ENA]
¡û
>W1710086315
BDOA01000088
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDOA]
606
531
-
Gln
TTG
[ENA]
¡û
>W1710086468
BDOD01000060
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDOD]
17748
17823
+
Gln
TTG
[ENA]
¡û
>W1710086603
BDOF01000075
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDOF]
112
37
-
Gln
TTG
[ENA]
¡û
>W1710086774
BDOJ01000028
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDOJ]
15154
15079
-
Gln
TTG
[ENA]
¡û
>W1710086921
BDOM01000007
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDOM]
5485
5560
+
Gln
TTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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