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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.239104 (190 seq.)
>W1710979274
LPNV01000046
Bacillota
Lacticaseibacillus rhamnosus [LPNV]
508781
508857
+
Ile
GAT
[ENA]
¡û
>W1710979326
LPNW01000064
Bacillota
Lacticaseibacillus rhamnosus [LPNW]
808
732
-
Ile
GAT
[ENA]
¡û
>W1711097172
LTIK01000123
Bacillota
Lactobacillus sp. HMSC078F07 [LTIK]
253
177
-
Ile
GAT
[ENA]
¡û
>W1711097836
LTJB01000022
Bacillota
Lactobacillus sp. HMSC064F12 [LTJB]
253
177
-
Ile
GAT
[ENA]
¡û
>W1711098498
LTJQ01000042
Bacillota
Lactobacillus sp. HMSC072E07 [LTJQ]
48
124
+
Ile
GAT
[ENA]
¡û
>W1711109690
LTUW01000089
Bacillota
Lactobacillus sp. HMSC056D05 [LTUW]
50
126
+
Ile
GAT
[ENA]
¡û
>W1711109877
LTVA01000151
Bacillota
Lactobacillus sp. HMSC075D02 [LTVA]
50
126
+
Ile
GAT
[ENA]
¡û
>W1711110875
LTVY01000087
Bacillota
Lactobacillus sp. HMSC073B09 [LTVY]
48
124
+
Ile
GAT
[ENA]
¡û
>W1711113104
LTXZ01000088
Bacillota
Lactobacillus sp. HMSC061B07 [LTXZ]
251
175
-
Ile
GAT
[ENA]
¡û
>W1711172161
LWBT01000072
Bacillota
Lacticaseibacillus rhamnosus [LWBT]
14
90
+
Ile
GAT
[ENA]
¡û
>W1711708099
MSTB01000025
Bacillota
Lacticaseibacillus rhamnosus [MSTB]
17
93
+
Ile
GAT
[ENA]
¡û
>W1711961689
NCSP01000033
Bacillota
Lacticaseibacillus paracasei [NCSP]
1618
1542
-
Ile
GAT
[ENA]
¡û
>C171030559
CP014201
Bacillota
Lacticaseibacillus rhamnosus BFE5264 [CP014201]
1705917
1705841
-
Ile
GAT
-
¡û
>C171030570
CP014201
Bacillota
Lacticaseibacillus rhamnosus BFE5264 [CP014201]
1046136
1046060
-
Ile
GAT
-
¡û
>C171056181
CP017065
Bacillota
Lacticaseibacillus casei LC5 [CP017065]
2605654
2605578
-
Ile
GAT
-
¡û
>C171056192
CP017065
Bacillota
Lacticaseibacillus casei LC5 [CP017065]
1877070
1876994
-
Ile
GAT
-
¡û
>C171108278
CP020464
Bacillota
Lacticaseibacillus rhamnosus Pen [CP020464]
581368
581444
+
Ile
GAT
-
¡û
>C171108289
CP020464
Bacillota
Lacticaseibacillus rhamnosus Pen [CP020464]
1249481
1249557
+
Ile
GAT
-
¡û
>C171118748
CP021426
Bacillota
Lacticaseibacillus rhamnosus 4B15 [CP021426]
1820651
1820727
+
Ile
GAT
-
¡û
>C171118759
CP021426
Bacillota
Lacticaseibacillus rhamnosus 4B15 [CP021426]
2460473
2460549
+
Ile
GAT
-
¡û
>W131064739
ANMI01000160
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp22 [ANMI]
216
140
-
Ile
GAT
[ENA]
¡û
>W131064827
ANMK01000050
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp120 [ANMK]
19
95
+
Ile
GAT
[ENA]
¡û
>W131064854
ANML01000013
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp223 [ANML]
216
140
-
Ile
GAT
[ENA]
¡û
>W131064942
ANMN01000002
Bacillota
Lacticaseibacillus paracasei subsp. paracasei Lpp226 [ANMN]
15
91
+
Ile
GAT
[ENA]
¡û
>W131156327
AQPP01000009
Bacillota
Lacticaseibacillus paracasei LcA [AQPP]
608779
608703
-
Ile
GAT
[ENA]
¡û
>W131156329
AQPP01000009
Bacillota
Lacticaseibacillus paracasei LcA [AQPP]
603722
603646
-
Ile
GAT
[ENA]
¡û
>W131156338
AQPP01000016
Bacillota
Lacticaseibacillus paracasei LcA [AQPP]
66088
66012
-
Ile
GAT
[ENA]
¡û
>C011475
CP000423
Bacillota
Lacticaseibacillus paracasei ATCC 334 [CP000423]
2504294
2504218
-
Ile
GAT
[Ensembl]
¡û
>C011486
CP000423
Bacillota
Lacticaseibacillus paracasei ATCC 334 [CP000423]
1828991
1828915
-
Ile
GAT
[Ensembl]
¡û
>W141004353
AFYJ01000024
Bacillota
Lacticaseibacillus casei 12A [AFYJ]
17070
17146
+
Ile
GAT
[ENA]
¡û
>W141004519
AFYM01000079
Bacillota
Lacticaseibacillus casei A2-362 [AFYM]
24235
24159
-
Ile
GAT
[ENA]
¡û
>W141004582
AFYN01000040
Bacillota
Lacticaseibacillus paracasei CRF28 [AFYN]
10840
10764
-
Ile
GAT
[ENA]
¡û
>W141004669
AFYP01000020
Bacillota
Lacticaseibacillus paracasei T71499 [AFYP]
534
610
+
Ile
GAT
[ENA]
¡û
>W141004735
AFYQ01000064
Bacillota
Lacticaseibacillus paracasei UCD174 [AFYQ]
50151
50075
-
Ile
GAT
[ENA]
¡û
>W141004860
AFYT01000008
Bacillota
Lacticaseibacillus paracasei Lc-10 [AFYT]
538
614
+
Ile
GAT
[ENA]
¡û
>W141004970
AFYU01000139
Bacillota
Lacticaseibacillus paracasei Lpc-37 [AFYU]
124
200
+
Ile
GAT
[ENA]
¡û
>WENV180133089
OATI01004309
[OATI] human gut metagenome; faeces
71
144
+
Ile
GAT
[ENA]
¢þ
>WENV180137289
OATO01004025
[OATO] human gut metagenome; faeces
273
346
+
Ile
GAT
[ENA]
¢þ
>WENV180143943
OATY01009323
[OATY] human gut metagenome; faeces
271
198
-
Ile
GAT
[ENA]
¢þ
>WENV180172686
OAVX01019991
[OAVX] human gut metagenome; faeces
271
198
-
Ile
GAT
[ENA]
¢þ
>WENV180173054
OAVY01001160
[OAVY] human gut metagenome; faeces
71
144
+
Ile
GAT
[ENA]
¢þ
>WENV180184136
OAWR01002871
[OAWR] human gut metagenome; faeces
757
830
+
Ile
GAT
[ENA]
¢þ
>WENV180407342
OBUQ01001297
[OBUQ] human gut metagenome; faeces
6056
5983
-
Ile
GAT
[ENA]
¢þ
>WENV180411306
OBUY01008566
[OBUY] human gut metagenome; faeces
289
362
+
Ile
GAT
[ENA]
¢þ
>WENV180431775
OBWH01012316
[OBWH] human gut metagenome; faeces
71
144
+
Ile
GAT
[ENA]
¢þ
>WENV180439228
OBWS01014258
[OBWS] human gut metagenome; faeces
574
647
+
Ile
GAT
[ENA]
¢þ
>WENV180440327
OBWV01000184
[OBWV] human gut metagenome; faeces
2294
2221
-
Ile
GAT
[ENA]
¢þ
>WENV180442129
OBWW01011078
[OBWW] human gut metagenome; faeces
874
801
-
Ile
GAT
[ENA]
¢þ
>WENV180442640
OBWX01002444
[OBWX] human gut metagenome; faeces
71
144
+
Ile
GAT
[ENA]
¢þ
>WENV180468461
OBYJ01023999
[OBYJ] human gut metagenome; faeces
271
198
-
Ile
GAT
[ENA]
¢þ
>WENV180476717
OBYY01011942
[OBYY] human gut metagenome; faeces
443
516
+
Ile
GAT
[ENA]
¢þ
>WENV180481919
OBZF01016312
[OBZF] human gut metagenome; faeces
71
144
+
Ile
GAT
[ENA]
¢þ
>WENV180484152
OBZH01023584
[OBZH] human gut metagenome; faeces
71
144
+
Ile
GAT
[ENA]
¢þ
>WENV180487037
OBZN01004723
[OBZN] human gut metagenome; faeces
826
753
-
Ile
GAT
[ENA]
¢þ
>WENV180492486
OBZW01014023
[OBZW] human gut metagenome; faeces
271
198
-
Ile
GAT
[ENA]
¢þ
>WENV180494107
OBZZ01009367
[OBZZ] human gut metagenome; faeces
71
144
+
Ile
GAT
[ENA]
¢þ
>WENV180598569
OCPM01018185
[OCPM] human gut metagenome; faeces
71
144
+
Ile
GAT
[ENA]
¢þ
>WENV181231561
OFEK01037598
[OFEK] activated sludge metagenome; Anaerobic digester
787
711
-
Ile
GAT
[ENA]
¢þ
>C08005896
FM177140
Bacillota
Lacticaseibacillus paracasei BL23 [FM177140]
2642973
2642897
-
Ile
GAT
[Ensembl]
¡û
>C08005907
FM177140
Bacillota
Lacticaseibacillus paracasei BL23 [FM177140]
1989829
1989753
-
Ile
GAT
[Ensembl]
¡û
>WENV170695561
LGVE01121867
[LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge
121
197
+
Ile
GAT
[ENA]
¢þ
>C181019577
CP016355
Bacillota
Lacticaseibacillus paracasei subsp. paracasei TMW 1.1434 [CP016355]
2616179
2616106
-
Ile
GAT
-
¡û
>C181019588
CP016355
Bacillota
Lacticaseibacillus paracasei subsp. paracasei TMW 1.1434 [CP016355]
1974236
1974163
-
Ile
GAT
-
¡û
>C181023026
CP017063
Bacillota
Lacticaseibacillus rhamnosus LR5 [CP017063]
2470942
2470869
-
Ile
GAT
-
¡û
>C181023037
CP017063
Bacillota
Lacticaseibacillus rhamnosus LR5 [CP017063]
1803555
1803482
-
Ile
GAT
-
¡û
>C181025064
CP017261
Bacillota
Lacticaseibacillus paracasei FAM18149 [CP017261]
2122463
2122390
-
Ile
GAT
-
¡û
>C181025075
CP017261
Bacillota
Lacticaseibacillus paracasei FAM18149 [CP017261]
1495892
1495819
-
Ile
GAT
-
¡û
>C181027796
CP017716
Bacillota
Lacticaseibacillus paracasei TK1501 [CP017716]
2501182
2501109
-
Ile
GAT
-
¡û
>C181027807
CP017716
Bacillota
Lacticaseibacillus paracasei TK1501 [CP017716]
1840981
1840908
-
Ile
GAT
-
¡û
>C181037370
CP019305
Bacillota
Lacticaseibacillus rhamnosus SCT-10-10-60 [CP019305]
2565912
2565839
-
Ile
GAT
-
¡û
>C181037382
CP019305
Bacillota
Lacticaseibacillus rhamnosus SCT-10-10-60 [CP019305]
1897047
1896974
-
Ile
GAT
-
¡û
>C181119630
CP025582
Bacillota
Lacticaseibacillus paracasei HD1.7 [CP025582]
2611355
2611282
-
Ile
GAT
-
¡û
>C181119641
CP025582
Bacillota
Lacticaseibacillus paracasei HD1.7 [CP025582]
1989959
1989886
-
Ile
GAT
-
¡û
>C181127741
CP026097
Bacillota
Lacticaseibacillus paracasei HDS-01 [CP026097]
2610917
2610844
-
Ile
GAT
-
¡û
>C181127752
CP026097
Bacillota
Lacticaseibacillus paracasei HDS-01 [CP026097]
1989652
1989579
-
Ile
GAT
-
¡û
>C181183667
CP029686
Bacillota
Lacticaseibacillus paracasei Lpc10 [CP029686]
1925512
1925585
+
Ile
GAT
-
¡û
>C181183678
CP029686
Bacillota
Lacticaseibacillus paracasei Lpc10 [CP029686]
2614376
2614449
+
Ile
GAT
-
¡û
>C181198819
CP031290
Bacillota
Lacticaseibacillus rhamnosus GG [CP031290]
1929320
1929247
-
Ile
GAT
-
¡û
>C181218068
LS991421
Bacillota
Lacticaseibacillus zeae [LS991421]
2484651
2484578
-
Ile
GAT
-
¡û
>C181218079
LS991421
Bacillota
Lacticaseibacillus zeae [LS991421]
1776125
1776052
-
Ile
GAT
-
¡û
>C191019471
CP022109
Bacillota
Lacticaseibacillus rhamnosus ATCC 11443 [CP022109]
2565923
2565850
-
Ile
GAT
-
¡û
>C191019483
CP022109
Bacillota
Lacticaseibacillus rhamnosus ATCC 11443 [CP022109]
1897054
1896981
-
Ile
GAT
-
¡û
>C191035774
CP025499
Bacillota
Lacticaseibacillus paracasei subsp. tolerans AO356 [CP025499]
2585656
2585583
-
Ile
GAT
-
¡û
>C191035785
CP025499
Bacillota
Lacticaseibacillus paracasei subsp. tolerans AO356 [CP025499]
1933523
1933450
-
Ile
GAT
-
¡û
>C191092741
CP032637
Bacillota
Lacticaseibacillus paracasei ZFM54 [CP032637]
2365968
2366041
+
Ile
GAT
-
¡û
>C191092752
CP032637
Bacillota
Lacticaseibacillus paracasei ZFM54 [CP032637]
3009962
3010035
+
Ile
GAT
-
¡û
>C191144734
CP035563
Bacillota
Lacticaseibacillus paracasei SRCM103299 [CP035563]
2646059
2645986
-
Ile
GAT
-
¡û
>C191144745
CP035563
Bacillota
Lacticaseibacillus paracasei SRCM103299 [CP035563]
1977503
1977430
-
Ile
GAT
-
¡û
>C191182630
CP040780
Bacillota
Lacticaseibacillus rhamnosus 1.0320 [CP040780]
775057
775130
+
Ile
GAT
-
¡û
>C191182668
CP040780
Bacillota
Lacticaseibacillus rhamnosus 1.0320 [CP040780]
2311198
2311125
-
Ile
GAT
-
¡û
>C191182680
CP040780
Bacillota
Lacticaseibacillus rhamnosus 1.0320 [CP040780]
57592
57519
-
Ile
GAT
-
¡û
>C191207109
LR134331
Bacillota
Lacticaseibacillus rhamnosus NCTC13764 [LR134331]
2564088
2564015
-
Ile
GAT
-
¡û
>C191207121
LR134331
Bacillota
Lacticaseibacillus rhamnosus NCTC13764 [LR134331]
1895858
1895785
-
Ile
GAT
-
¡û
>W09126013
ACIZ01000134
Bacillota
Lacticaseibacillus rhamnosus LMS2-1 [ACIZ]
219
143
-
Ile
GAT
[ENA]
¡û
>W141713241
JMSI01000019
Bacillota
Lacticaseibacillus rhamnosus 51B [JMSI]
333
257
-
Ile
GAT
[ENA]
¡û
>W141805382
JPKN01000287
Bacillota
Lacticaseibacillus paracasei casei [JPKN]
1041
1118
+
Ile
GAT
[ENA]
¡û
>W1910500733
FXZN01000031
Bacillota
Lacticaseibacillus zeae casei [FXZN]
155
228
+
Ile
GAT
[ENA]
¡û
>W1910612560
LGIY01000002
Bacillota
Lacticaseibacillus paracasei CCC B1205 [LGIY]
249498
249425
-
Ile
GAT
[ENA]
¡û
>W1910621255
LKFD01000005
Bacillota
Lacticaseibacillus paracasei FAM18099 [LKFD]
1655026
1654953
-
Ile
GAT
[ENA]
¡û
>W1910621266
LKFD01000005
Bacillota
Lacticaseibacillus paracasei FAM18099 [LKFD]
993758
993685
-
Ile
GAT
[ENA]
¡û
>W1910621640
LKFK01000014
Bacillota
Lacticaseibacillus paracasei FAM18121 [LKFK]
286256
286183
-
Ile
GAT
[ENA]
¡û
>W1910621650
LKFK01000015
Bacillota
Lacticaseibacillus paracasei FAM18121 [LKFK]
120774
120701
-
Ile
GAT
[ENA]
¡û
>W1910621856
LKFO01000058
Bacillota
Lacticaseibacillus paracasei FAM18129 [LKFO]
282124
282051
-
Ile
GAT
[ENA]
¡û
>W1910622714
LKGE01000002
Bacillota
Lacticaseibacillus paracasei FAM3228 [LKGE]
2439735
2439662
-
Ile
GAT
[ENA]
¡û
>W1910622725
LKGE01000002
Bacillota
Lacticaseibacillus paracasei FAM3228 [LKGE]
640021
639948
-
Ile
GAT
[ENA]
¡û
>W1910923344
NIGW01000035
Bacillota
Lacticaseibacillus paracasei LMG S-29188 [NIGW]
3266
3193
-
Ile
GAT
[ENA]
¡û
>W1911422757
NXES01000001
Bacillota
Lacticaseibacillus paracasei B3 [NXES]
370
443
+
Ile
GAT
[ENA]
¡û
>W1911422868
NXET01000076
Bacillota
Lacticaseibacillus paracasei B2 [NXET]
252
179
-
Ile
GAT
[ENA]
¡û
>W1911423034
NXEW01000052
Bacillota
Lacticaseibacillus rhamnosus P4 [NXEW]
314
387
+
Ile
GAT
[ENA]
¡û
>W1911631869
PUFK01000015
Bacillota
Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 [PUFK]
1679
1752
+
Ile
GAT
[ENA]
¡û
>W1911642792
PYRN01000035
Bacillota
Lacticaseibacillus rhamnosus ARJD [PYRN]
296
223
-
Ile
GAT
[ENA]
¡û
>W1911676583
QHHM01000001
Bacillota
Lacticaseibacillus paracasei JS1 [QHHM]
2479453
2479526
+
Ile
GAT
[ENA]
¡û
>W1911676623
QHHM01000001
Bacillota
Lacticaseibacillus paracasei JS1 [QHHM]
1047089
1047016
-
Ile
GAT
[ENA]
¡û
>W1911718246
QQWF01000759
Bacillota
Lacticaseibacillus rhamnosus NRRL B-442 [QQWF]
460
387
-
Ile
GAT
[ENA]
¡û
>W1810190545
PKJX01000016
Bacillota
Lacticaseibacillus rhamnosus UMB0004 [PKJX]
311
238
-
Ile
GAT
[ENA]
¡û
>W1810195073
PKQF01000038
Bacillota
Lacticaseibacillus rhamnosus NRRL B-442 [PKQF]
143
216
+
Ile
GAT
[ENA]
¡û
>W1810195130
PKQJ01000084
Bacillota
Lacticaseibacillus paracasei DUP 13076 [PKQJ]
151
224
+
Ile
GAT
[ENA]
¡û
>W1810472537
QAGW01000016
Bacillota
Lacticaseibacillus rhamnosus DS17_11 [QAGW]
460
387
-
Ile
GAT
[ENA]
¡û
>W1810472650
QAGY01000038
Bacillota
Lacticaseibacillus rhamnosus DS9_11 [QAGY]
143
216
+
Ile
GAT
[ENA]
¡û
>W1810472762
QAHA01000035
Bacillota
Lacticaseibacillus rhamnosus DS14_11 [QAHA]
143
216
+
Ile
GAT
[ENA]
¡û
>W1810474008
QAHV01000095
Bacillota
Lactobacillus sp. DS15_6 [QAHV]
151
224
+
Ile
GAT
[ENA]
¡û
>W1810474171
QAHY01000096
Bacillota
Lactobacillus sp. DS9_6 [QAHY]
343
270
-
Ile
GAT
[ENA]
¡û
>W1810488126
QAZD01000160
Bacillota
Lacticaseibacillus casei DS1_13 [QAZD]
428
355
-
Ile
GAT
[ENA]
¡û
>W1810488174
QAZE01000149
Bacillota
Lacticaseibacillus casei DS13_13 [QAZE]
291
218
-
Ile
GAT
[ENA]
¡û
>W1810488414
QAZI01000069
Bacillota
Lacticaseibacillus rhamnosus DS4_11 [QAZI]
143
216
+
Ile
GAT
[ENA]
¡û
>W1810488525
QAZK01000036
Bacillota
Lacticaseibacillus rhamnosus DS13_11 [QAZK]
143
216
+
Ile
GAT
[ENA]
¡û
>W1810489425
QAZZ01000100
Bacillota
Lactobacillus sp. DS18_6 [QAZZ]
343
270
-
Ile
GAT
[ENA]
¡û
>W1810586952
QFFR01000038
Bacillota
Lacticaseibacillus rhamnosus TMC3115 [QFFR]
143
216
+
Ile
GAT
[ENA]
¡û
>W1810907625
QVHW01000051
Bacillota
Lacticaseibacillus paracasei AM33-2AC [QVHW]
3328
3255
-
Ile
GAT
[ENA]
¡û
>C151000802
AP012541
Bacillota
Lacticaseibacillus paracasei subsp. paracasei JCM 8130 [AP012541]
818903
818979
+
Ile
GAT
[Ensembl]
¡û
>C151000816
AP012541
Bacillota
Lacticaseibacillus paracasei subsp. paracasei JCM 8130 [AP012541]
2612144
2612068
-
Ile
GAT
[Ensembl]
¡û
>C151000827
AP012541
Bacillota
Lacticaseibacillus paracasei subsp. paracasei JCM 8130 [AP012541]
1882674
1882598
-
Ile
GAT
[Ensembl]
¡û
>C151000870
AP012544
Bacillota
Lacticaseibacillus casei DSM 20011 = JCM 1134 = ATCC 393 [AP012544]
2482143
2482067
-
Ile
GAT
[Ensembl]
¡û
>C151000881
AP012544
Bacillota
Lacticaseibacillus casei DSM 20011 = JCM 1134 = ATCC 393 [AP012544]
1788961
1788885
-
Ile
GAT
[Ensembl]
¡û
>C151016924
CP007122
Bacillota
Lacticaseibacillus paracasei N1115 [CP007122]
2439332
2439256
-
Ile
GAT
[Ensembl]
¡û
>C151016935
CP007122
Bacillota
Lacticaseibacillus paracasei N1115 [CP007122]
1982216
1982140
-
Ile
GAT
[Ensembl]
¡û
>C151016962
CP007122
Bacillota
Lacticaseibacillus paracasei N1115 [CP007122]
1960266
1960190
-
Ile
GAT
[Ensembl]
¡û
>C151091726
CP012148
Bacillota
Lacticaseibacillus paracasei L9 [CP012148]
2632567
2632491
-
Ile
GAT
-
¡û
>C151091737
CP012148
Bacillota
Lacticaseibacillus paracasei L9 [CP012148]
1977444
1977368
-
Ile
GAT
-
¡û
>W1510005486
BAYN01000065
Bacillota
Lacticaseibacillus paracasei NRIC 1917 NRIC1917 [BAYN]
278
202
-
Ile
GAT
[ENA]
¡û
>W1510005521
BAYO01000192
Bacillota
Lacticaseibacillus paracasei NRIC 1981 NRIC1981 [BAYO]
24
100
+
Ile
GAT
[ENA]
¡û
>W1510022519
CBZU010000033
Bacillota
Lacticaseibacillus rhamnosus BPL15 [CBZU]
219
143
-
Ile
GAT
[ENA]
¡û
>C10108249
CP001084
Bacillota
Lacticaseibacillus paracasei Zhang [CP001084]
2437799
2437723
-
Ile
GAT
[Ensembl]
¡û
>C10108260
CP001084
Bacillota
Lacticaseibacillus paracasei Zhang [CP001084]
1785621
1785545
-
Ile
GAT
[Ensembl]
¡û
>C10108930
AP011548
Bacillota
Lacticaseibacillus rhamnosus GG ATCC 53103 [AP011548]
2563669
2563593
-
Ile
GAT
-
¡û
>C10108941
AP011548
Bacillota
Lacticaseibacillus rhamnosus GG ATCC 53103 [AP011548]
1923722
1923646
-
Ile
GAT
-
¡û
>C11112400
CP002616
Bacillota
Lacticaseibacillus paracasei LC2W [CP002616]
2603051
2602975
-
Ile
GAT
[Ensembl]
¡û
>C11112411
CP002616
Bacillota
Lacticaseibacillus paracasei LC2W [CP002616]
1950917
1950841
-
Ile
GAT
[Ensembl]
¡û
>W1511397850
JTDC01000089
Bacillota
Lacticaseibacillus rhamnosus 116 [JTDC]
219
143
-
Ile
GAT
[ENA]
¡û
>W1511435013
JUIH01000001
Bacillota
Lacticaseibacillus rhamnosus Lr108 [JUIH]
14
90
+
Ile
GAT
[ENA]
¡û
>W1511437367
JUKV01000164
Bacillota
Lacticaseibacillus rhamnosus 988_LRHA [JUKV]
282
206
-
Ile
GAT
[ENA]
¡û
>W1511437684
JULF01000298
Bacillota
Lacticaseibacillus rhamnosus 979_LRHA [JULF]
79
155
+
Ile
GAT
[ENA]
¡û
>W1511438613
JUMO01000135
Bacillota
Lacticaseibacillus rhamnosus 944_LRHA [JUMO]
4
80
+
Ile
GAT
[ENA]
¡û
>W1511438654
JUMP01000191
Bacillota
Lacticaseibacillus rhamnosus 943_LRHA [JUMP]
282
206
-
Ile
GAT
[ENA]
¡û
>W1511440944
JUPX01000010
Bacillota
Lacticaseibacillus rhamnosus 870_LRHA [JUPX]
279
203
-
Ile
GAT
[ENA]
¡û
>W1511443550
JUTB01000139
Bacillota
Lacticaseibacillus rhamnosus 784_LRHA [JUTB]
48
124
+
Ile
GAT
[ENA]
¡û
>W1511444196
JUTS01000077
Bacillota
Lacticaseibacillus rhamnosus 769_LRHA [JUTS]
79
155
+
Ile
GAT
[ENA]
¡û
>W1511446182
JUWQ01000162
Bacillota
Lacticaseibacillus rhamnosus 699_LRHA [JUWQ]
273
197
-
Ile
GAT
[ENA]
¡û
>W1511451981
JVDP01000077
Bacillota
Lacticaseibacillus rhamnosus 526_LRHA [JVDP]
1794
1870
+
Ile
GAT
[ENA]
¡û
>W1511460700
JVLT01000015
Bacillota
Lacticaseibacillus rhamnosus 319_LRHA [JVLT]
3266
3190
-
Ile
GAT
[ENA]
¡û
>W1511468269
JVUA01000226
Bacillota
Lacticaseibacillus paracasei 1316.rep2_LPAR [JVUA]
1
77
+
Ile
GAT
[ENA]
¡û
>W1511523896
JYCS01000071
Bacillota
Lacticaseibacillus rhamnosus CLS17 [JYCS]
14
90
+
Ile
GAT
[ENA]
¡û
>W1511586311
LAZE01000045
Bacillota
Lacticaseibacillus rhamnosus CNCM-I-3698 [LAZE]
240
164
-
Ile
GAT
[ENA]
¡û
>W1511621129
LCUN01000004
Bacillota
Lacticaseibacillus casei N87 [LCUN]
148
72
-
Ile
GAT
[ENA]
¡û
>W1511621184
LCUN01000022
Bacillota
Lacticaseibacillus casei N87 [LCUN]
148
72
-
Ile
GAT
[ENA]
¡û
>W1511685036
LFNA01000079
Bacillota
Lacticaseibacillus rhamnosus 40f [LFNA]
17
93
+
Ile
GAT
[ENA]
¡û
>W1511685092
LFNB01000076
Bacillota
Lacticaseibacillus rhamnosus 313 [LFNB]
14
90
+
Ile
GAT
[ENA]
¡û
>C161075067
CP014645
Bacillota
Lacticaseibacillus rhamnosus ASCC 290 [CP014645]
1627818
1627742
-
Ile
GAT
-
¡û
>C161108932
LT220504
Bacillota
Lacticaseibacillus rhamnosus BPL5 [LT220504]
331184
331260
+
Ile
GAT
-
¡û
>C161108943
LT220504
Bacillota
Lacticaseibacillus rhamnosus BPL5 [LT220504]
2686491
2686567
+
Ile
GAT
-
¡û
>W1610037782
AZGH01000016
Bacillota
Lacticaseibacillus paracasei subsp. paracasei DSM 5622 [AZGH]
20022
20098
+
Ile
GAT
[ENA]
¡û
>C131015436
CP005484
Bacillota
Lacticaseibacillus rhamnosus LOCK900 [CP005484]
2471788
2471712
-
Ile
GAT
[Ensembl]
¡û
>C131015447
CP005484
Bacillota
Lacticaseibacillus rhamnosus LOCK900 [CP005484]
1802822
1802746
-
Ile
GAT
[Ensembl]
¡û
>C131015494
CP005485
Bacillota
Lacticaseibacillus rhamnosus LOCK908 [CP005485]
2566611
2566535
-
Ile
GAT
[Ensembl]
¡û
>C131015506
CP005485
Bacillota
Lacticaseibacillus rhamnosus LOCK908 [CP005485]
1897191
1897115
-
Ile
GAT
[Ensembl]
¡û
>W1610543298
JTHQ01000107
Bacillota
Lacticaseibacillus rhamnosus [JTHQ]
219
143
-
Ile
GAT
[ENA]
¡û
>W1610543660
JTHX01000054
Bacillota
Lacticaseibacillus rhamnosus [JTHX]
20
96
+
Ile
GAT
[ENA]
¡û
>W1610544583
JTIQ01000079
Bacillota
Lacticaseibacillus rhamnosus [JTIQ]
223
147
-
Ile
GAT
[ENA]
¡û
>W1610544638
JTIR01000085
Bacillota
Lacticaseibacillus rhamnosus [JTIR]
14
90
+
Ile
GAT
[ENA]
¡û
>W1610544738
JTIU01000001
Bacillota
Lacticaseibacillus rhamnosus [JTIU]
14
90
+
Ile
GAT
[ENA]
¡û
>W1610544874
JTIX01000001
Bacillota
Lacticaseibacillus rhamnosus [JTIX]
219
143
-
Ile
GAT
[ENA]
¡û
>W1610980766
LWBT01000072
Bacillota
Lacticaseibacillus rhamnosus [LWBT]
14
90
+
Ile
GAT
[ENA]
¡û
>WENV082501
BAAV01014167
Gut microbiome of Human (healthy human sample F1-T, Adult, Female)
171
95
-
Ile
GAT
[ENA]
>W1710034821
AZGH01000016
Bacillota
Lacticaseibacillus paracasei subsp. paracasei DSM 5622 [AZGH]
20022
20098
+
Ile
GAT
[ENA]
¡û
>W1710646429
JTHQ01000107
Bacillota
Lacticaseibacillus rhamnosus [JTHQ]
219
143
-
Ile
GAT
[ENA]
¡û
>W1710646791
JTHX01000054
Bacillota
Lacticaseibacillus rhamnosus [JTHX]
20
96
+
Ile
GAT
[ENA]
¡û
>W1710647714
JTIQ01000079
Bacillota
Lacticaseibacillus rhamnosus [JTIQ]
223
147
-
Ile
GAT
[ENA]
¡û
>W1710647769
JTIR01000085
Bacillota
Lacticaseibacillus rhamnosus [JTIR]
14
90
+
Ile
GAT
[ENA]
¡û
>W1710647869
JTIU01000001
Bacillota
Lacticaseibacillus rhamnosus [JTIU]
14
90
+
Ile
GAT
[ENA]
¡û
>W1710648005
JTIX01000001
Bacillota
Lacticaseibacillus rhamnosus [JTIX]
219
143
-
Ile
GAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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