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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.239409 (9 seq.)
>W131244798
CAQJ01000080
Nitrospinota
Nitrospina gracilis 3/211 [CAQJ]
5069
4995
-
Gly
CCC
[ENA]
¡û
>W1711395466
METR01000060
Unclassified
candidate division WOR-1 bacterium RIFOXYA12_FULL_36_13 [METR]
22102
22028
-
Gly
CCC
[ENA]
¡û
>W1711395576
METU01000014
Unclassified
candidate division WOR-1 bacterium RIFOXYA2_FULL_36_21 [METU]
62817
62891
+
Gly
CCC
[ENA]
¡û
>W1711395631
METV01000059
Unclassified
candidate division WOR-1 bacterium RIFOXYA2_FULL_37_7 [METV]
3763
3835
+
Gly
CCC
[ENA]
¡û
>W1711395870
MEUA01000066
Unclassified
candidate division WOR-1 bacterium RIFOXYB2_FULL_36_35 [MEUA]
15232
15306
+
Gly
CCC
[ENA]
¡û
>W1711395877
MEUB01000007
Unclassified
candidate division WOR-1 bacterium RIFOXYB2_FULL_37_13 [MEUB]
61824
61752
-
Gly
CCC
[ENA]
¡û
>W1711396165
MEUH01000072
Unclassified
candidate division WOR-1 bacterium RIFOXYC2_FULL_37_10 [MEUH]
36591
36663
+
Gly
CCC
[ENA]
¡û
>W1711396284
MEUK01000093
Unclassified
candidate division WOR-1 bacterium RIFOXYD2_FULL_36_8 [MEUK]
20188
20262
+
Gly
CCC
[ENA]
¡û
>W1910731350
MHDR01000151
Nitrospinota
Nitrospinae bacterium RIFCSPLOWO2_12_FULL_47_7 [MHDR]
441
369
-
Gly
CCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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