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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.24515 (28 seq.)
>W1710811807
LKIU01000005
Actinomycetota
Arthrobacter sp. Edens01 [LKIU]
787724
787636
-
Ser
TGA
[ENA]
¡û
>W1710880342
LMSH01000001
Actinomycetota
Arthrobacter sp. Soil763 [LMSH]
49821
49909
+
Ser
TGA
[ENA]
¡û
>W1710916105
LNUT01000004
Actinomycetota
Arthrobacter sp. EPSL27 [LNUT]
177242
177152
-
Ser
TGA
[ENA]
¡û
>W131172215
ARGT01000023
Actinomycetota
Arthrobacter sp. 131MFCol6.1 [ARGT]
44891
44979
+
Ser
TGA
[ENA]
¡û
>W131237737
AUPJ01000507
Actinomycetota
Arthrobacter sp. TB 26 [AUPJ]
16105
16015
-
Ser
TGA
[ENA]
¡û
>W141075158
ASZW01000014
Actinomycetota
Arthrobacter sp. CAL618 [ASZW]
23055
22965
-
Ser
TGA
[ENA]
¡û
>W141213395
AZRY01000107
Actinomycetota
Arthrobacter sp. H20 [AZRY]
19857
19947
+
Ser
TGA
[ENA]
¡û
>W141213450
AZRZ01000405
Actinomycetota
Arthrobacter sp. H41 [AZRZ]
6334
6424
+
Ser
TGA
[ENA]
¡û
>W141213499
AZSA01000231
Actinomycetota
Arthrobacter sp. Br18 [AZSA]
4959
5047
+
Ser
TGA
[ENA]
¡û
>W1810167317
PJIJ01000004
Actinomycetota
Arthrobacter sp. ZGTC212 [PJIJ]
36062
36152
+
Ser
TGA
[ENA]
¡û
>W1810167751
PJIS01000004
Actinomycetota
Arthrobacter sp. 9E06 [PJIS]
184428
184340
-
Ser
TGA
[ENA]
¡û
>W1810167802
PJIT01000004
Actinomycetota
Arthrobacter sp. 9E18 [PJIT]
184428
184340
-
Ser
TGA
[ENA]
¡û
>W1810167853
PJIU01000004
Actinomycetota
Arthrobacter sp. 9E16 [PJIU]
184428
184340
-
Ser
TGA
[ENA]
¡û
>W1810168000
PJIX01000004
Actinomycetota
Arthrobacter sp. 08Y14 [PJIX]
203688
203598
-
Ser
TGA
[ENA]
¡û
>W1810424197
PYUI01000025
Actinomycetota
Arthrobacter sp. H-02-3 LBUM149 [PYUI]
1915
2003
+
Ser
TGA
[ENA]
¡û
>W1810627301
QHLZ01000002
Actinomycetota
Arthrobacter psychrochitiniphilus GP3 [QHLZ]
50198
50286
+
Ser
TGA
[ENA]
¡û
>W1810673923
QJVC01000015
Actinomycetota
Arthrobacter psychrolactophilus B7 [QJVC]
38978
38890
-
Ser
TGA
[ENA]
¡û
>W1810673984
QJVE01000001
Actinomycetota
Arthrobacter stackebrandtii CCM 2783 [QJVE]
45871
45959
+
Ser
TGA
[ENA]
¡û
>C151029496
CP007595
Actinomycetota
Arthrobacter sp. PAMC 25486 [CP007595]
3411539
3411451
-
Ser
TGA
[Ensembl]
¡û
>C151097191
CP012677
Actinomycetota
Arthrobacter alpinus R3.8 [CP012677]
4030638
4030550
-
Ser
TGA
-
¡û
>W1510089415
CECE01000010
Actinomycetota
Arthrobacter koreensis 5J12A [CECE]
67870
67958
+
Ser
TGA
[ENA]
¡û
>W1610067306
BCQM01000004
Actinomycetota
Arthrobacter luteolus NBRC 107841 [BCQM]
279970
279882
-
Ser
TGA
[ENA]
¡û
>W1610675904
LKIU01000005
Actinomycetota
Arthrobacter sp. Edens01 [LKIU]
787724
787636
-
Ser
TGA
[ENA]
¡û
>W1610742688
LMSH01000001
Actinomycetota
Arthrobacter sp. Soil763 [LMSH]
49821
49909
+
Ser
TGA
[ENA]
¡û
>W1610774344
LNUT01000004
Actinomycetota
Arthrobacter sp. EPSL27 [LNUT]
177242
177152
-
Ser
TGA
[ENA]
¡û
>W1710064679
BCQM01000004
Actinomycetota
Arthrobacter luteolus NBRC 107841 [BCQM]
279970
279882
-
Ser
TGA
[ENA]
¡û
>W1710525678
FNJS01000027
Actinomycetota
Arthrobacter sp. ok909 [FNJS]
46155
46245
+
Ser
TGA
[ENA]
¡û
>W1710577624
FPAY01000003
Actinomycetota
Arthrobacter sp. ov118 [FPAY]
41643
41733
+
Ser
TGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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