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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.246948 (5 seq.)
>WENV181020734
ODWV01000172
[ODWV] human metagenome; G_DNA_Tongue dorsum
13705
13779
+
Arg
TCT
[ENA]
¢þ
>WENV181103287
OECT01060095
[OECT] human metagenome; G_DNA_Tongue dorsum
9
83
+
Arg
TCT
[ENA]
¢þ
>WENV181105970
OEED01027537
[OEED] human metagenome; G_DNA_Tongue dorsum
610
684
+
Arg
TCT
[ENA]
¢þ
>WENV181108396
OEEJ01000018
[OEEJ] human metagenome; G_DNA_Tongue dorsum
59278
59352
+
Arg
TCT
[ENA]
¢þ
>WENV181113387
OEEL01024425
[OEEL] human metagenome; G_DNA_Tongue dorsum
9
83
+
Arg
TCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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