tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.247224 (92 seq.)
>W1710785713 LJIC01000058 Alphaproteobacteria Rhodopseudomonas sp. AAP120 [LJIC] 5540 5615 + Thr CGT [ENA] ¡û
>W1711129932 LUUM01000004 Alphaproteobacteria Methylosinus sp. R-45379 [LUUM] 4791 4716 - Thr CGT [ENA] ¡û
>W1711228868 LXWX01000117 Alphaproteobacteria Methylosinus sp. 3S-1 [LXWX] 13654 13579 - Thr CGT [ENA] ¡û
>W1711505831 MKVW01000005 Alphaproteobacteria Rhizobiales bacterium 62-17 [MKVW] 9734 9659 - Thr CGT [ENA] ¡û
>W1711505863 MKVX01000005 Alphaproteobacteria Rhizobiales bacterium 62-47 [MKVX] 447560 447635 + Thr CGT [ENA] ¡û
>W1711783518 MVOD01000017 Alphaproteobacteria Rhodopseudomonas palustris [MVOD] 58193 58268 + Thr CGT [ENA] ¡û
>C171131948 LT859959 Alphaproteobacteria Bradyrhizobium sp. ORS 285 [LT859959] 7587912 7587837 - Thr CGT - ¡û
>W131186384 ARWB01000001 Alphaproteobacteria Methylopila sp. M107 [ARWB] 288252 288177 - Thr CGT [ENA] ¡û
>W131163815 ARAB01000002 Alphaproteobacteria Methylosinus sp. LW4 [ARAB] 2312 2237 - Thr CGT [ENA] ¡û
>C004076 CP000494 Alphaproteobacteria Bradyrhizobium sp. BTAi1 [CP000494] 289723 289648 - Thr CGT [Ensembl] ¡û
>C004123 CU234118 Alphaproteobacteria Bradyrhizobium sp. ORS 278 ORS278 [CU234118] 311605 311530 - Thr CGT [Ensembl] ¡û
>C018878 CP000463 Alphaproteobacteria Rhodopseudomonas palustris [CP000463] 70577 70502 - Thr CGT [Ensembl] ¡û
>C018879 CP000301 Alphaproteobacteria Rhodopseudomonas palustris [CP000301] 58307 58382 + Thr CGT [Ensembl] ¡û
>C018967 CP000283 Alphaproteobacteria Rhodopseudomonas palustris BisB5 [CP000283] 537639 537564 - Thr CGT [Ensembl] ¡û
>C018976 BX571963 Alphaproteobacteria Rhodopseudomonas palustris [BX571963] 284219 284294 + Thr CGT [Ensembl] ¡û
>C019068 CP000250 Alphaproteobacteria Rhodopseudomonas palustris HaA2 [CP000250] 354148 354073 - Thr CGT [Ensembl] ¡û
>WENV180255281 OBEQ010710570 [OBEQ] groundwater metagenome; groundwater 389 314 - Thr CGT [ENA] ¢þ
>WENV180308757 OBJR01172921 [OBJR] soil metagenome; soil 28 103 + Thr CGT [ENA] ¢þ
>WENV180354433 OBLQ011742137 [OBLQ] soil metagenome; soil 160 85 - Thr CGT [ENA] ¢þ
>WENV180690804 OCZS010026057 [OCZS] soil metagenome; soil 979 904 - Thr CGT [ENA] ¢þ
>WENV180694609 OCZS012481642 [OCZS] soil metagenome; soil 151 76 - Thr CGT [ENA] ¢þ
>WENV181166898 OEIU01004036 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 5358 5433 + Thr CGT [ENA] ¢þ
>WENV181166960 OEIU01004941 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 5862 5937 + Thr CGT [ENA] ¢þ
>WENV181234788 OFEU01008944 [OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium 455 380 - Thr CGT [ENA] ¢þ
>W141149768 AWZU01000033 Alphaproteobacteria Bradyrhizobium sp. ARR65 [AWZU] 30209 30284 + Thr CGT [ENA] ¡û
>W08008849 ABLP01000004 Alphaproteobacteria Methylocella silvestris BL2 [ABLP] 119957 120032 + Thr CGT [ENA] ¡û
>W141213971 AZSJ01000003 Alphaproteobacteria Afipia sp. P52-10 [AZSJ] 1682081 1682156 + Thr CGT [ENA] ¡û
>W141216055 AZUO01000001 Alphaproteobacteria Methylosinus sp. LW3 [AZUO] 890441 890366 - Thr CGT [ENA] ¡û
>W141223328 BADD01000673 Alphaproteobacteria Rhodopseudomonas sp. B29 [BADD] 2541 2616 + Thr CGT [ENA] ¡û
>WENV182409136 OIFG01002469 [OIFG] human gut metagenome; stool 1446 1371 - Thr CGT [ENA] ¢þ
>WENV182412650 OIFV01002364 [OIFV] human gut metagenome; stool 412 487 + Thr CGT [ENA] ¢þ
>W141240082 CAFK01000112 Alphaproteobacteria Bradyrhizobium sp. STM 3843 [CAFK] 32917 32842 - Thr CGT [ENA] ¡û
>WENV182962862 OKWO01001585 [OKWO] human gut metagenome; stool 1449 1374 - Thr CGT [ENA] ¢þ
>WENV182962930 OKWP01000012 [OKWP] human gut metagenome; stool 202584 202659 + Thr CGT [ENA] ¢þ
>WENV182966085 OKWU01001730 [OKWU] human gut metagenome; stool 521 446 - Thr CGT [ENA] ¢þ
>WENV182966367 OKWV01001834 [OKWV] human gut metagenome; stool 605 680 + Thr CGT [ENA] ¢þ
>WENV182966588 OKWW01003375 [OKWW] human gut metagenome; stool 784 709 - Thr CGT [ENA] ¢þ
>WENV183660357 ORJL010016464 [ORJL] groundwater metagenome; groundwater 1727 1652 - Thr CGT [ENA] ¢þ
>WENV183675632 ORJL011532032 [ORJL] groundwater metagenome; groundwater 113 188 + Thr CGT [ENA] ¢þ
>WENV183684916 ORMF010774510 [ORMF] groundwater metagenome; groundwater 704 779 + Thr CGT [ENA] ¢þ
>WENV183736609 PJUC01022660 [PJUC] soil metagenome; Soil enriched on filter paper 151 226 + Thr CGT [ENA] ¢þ
>WENV183740608 PJUF01004376 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 2492 2567 + Thr CGT [ENA] ¢þ
>WENV170709078 LNFM01000095 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 252019 251944 - Thr CGT [ENA] ¢þ
>C181001039 AP014946 Alphaproteobacteria Variibacter gotjawalensis GJW-30 [AP014946] 50916 50991 + Thr CGT - ¡û
>C181041842 CP019966 Alphaproteobacteria Rhodopseudomonas palustris PS3 [CP019966] 283994 284069 + Thr CGT - ¡û
>C181041890 CP019967 Alphaproteobacteria Rhodopseudomonas palustris YSC3 [CP019967] 287341 287416 + Thr CGT - ¡û
>C181089627 CP023737 Alphaproteobacteria Methylosinus trichosporium OB3b [CP023737] 2426456 2426531 + Thr CGT - ¡û
>W09103842 AAKZ01000014 Alphaproteobacteria Rhodopseudomonas palustris BisB5 [AAKZ] 143223 143148 - Thr CGT [ENA] ¡û
>W09103856 AALA01000003 Alphaproteobacteria Rhodopseudomonas palustris BisA53 [AALA] 207470 207545 + Thr CGT [ENA] ¡û
>W09104109 AALJ01000002 Alphaproteobacteria Bradyrhizobium sp. BTAi1 [AALJ] 387092 387017 - Thr CGT [ENA] ¡û
>W09104383 AALQ01000004 Alphaproteobacteria Rhodopseudomonas palustris HaA2 [AALQ] 227328 227253 - Thr CGT [ENA] ¡û
>W09104430 AALR01000016 Alphaproteobacteria Rhodopseudomonas palustris BisB18 [AALR] 103374 103449 + Thr CGT [ENA] ¡û
>W09107611 ABJR01000010 Alphaproteobacteria Rhodopseudomonas palustris TIE-1 [ABJR] 44974 45049 + Thr CGT [ENA] ¡û
>C191005685 AP018907 Alphaproteobacteria Blastochloris tepida GI [AP018907] 3703577 3703502 - Thr CGT - ¡û
>C191221063 LR590083 Alphaproteobacteria Beijerinckiaceae bacterium RH AL1 [LR590083] 1911491 1911566 + Thr CGT - ¡û
>W141701378 JMKQ01000004 Alphaproteobacteria Methylocystis sp. LW5 [JMKQ] 9035 8960 - Thr CGT [ENA] ¡û
>W141730473 JNIJ01000019 Alphaproteobacteria Bradyrhizobium sp. URHD0069 [JNIJ] 64491 64566 + Thr CGT [ENA] ¡û
>W141821086 JQNH01000001 Alphaproteobacteria Rhizobiales bacterium YIM 77505 [JQNH] 2747971 2747896 - Thr CGT [ENA] ¡û
>W141821241 JQNK01000010 Alphaproteobacteria Methylosinus sp. PW1 [JQNK] 9696 9621 - Thr CGT [ENA] ¡û
>W1910501733 FYAS01000031 Alphaproteobacteria Bosea sp. CS1GBMeth4 [FYAS] 98941 99016 + Thr CGT [ENA] ¡û
>C09107920 CP001280 Alphaproteobacteria Methylocella silvestris BL2 [CP001280] 1682146 1682071 - Thr CGT [Ensembl] ¡û
>W1911148380 NPEU01000295 Alphaproteobacteria Rhodoplanes elegans DSM 11907 [NPEU] 3890 3815 - Thr CGT [ENA] ¡û
>W1911148498 NPEX01000040 Alphaproteobacteria Rhodoplanes roseus DSM 5909 [NPEX] 176 251 + Thr CGT [ENA] ¡û
>W1911219156 NRSI01000011 Alphaproteobacteria Rhodopseudomonas palustris DSM 126 [NRSI] 44360 44435 + Thr CGT [ENA] ¡û
>W1911760556 QWVU01000010 Alphaproteobacteria Rhodopseudomonas palustris R1 [QWVU] 309027 308952 - Thr CGT [ENA] ¡û
>W1911809182 QYYC01000040 Alphaproteobacteria Rhodopseudomonas palustris 2.1.37 [QYYC] 44569 44644 + Thr CGT [ENA] ¡û
>W1911809211 QYYD01000006 Alphaproteobacteria Rhodopseudomonas palustris 2.1.18 [QYYD] 5603 5678 + Thr CGT [ENA] ¡û
>W1810068811 PDZR01000028 Alphaproteobacteria Methylocella silvestris TVC [PDZR] 795 720 - Thr CGT [ENA] ¡û
>W1810330557 PUIV01000005 Alphaproteobacteria Methylosinus sporium DSM 17706 [PUIV] 4873 4798 - Thr CGT [ENA] ¡û
>W1810679440 QKQS01000023 Alphaproteobacteria Rhodopseudomonas palustris XCP [QKQS] 789675 789750 + Thr CGT [ENA] ¡û
>W1810787530 QRDT01000039 Alphaproteobacteria Rhodopseudomonas pentothenatexigens JA575 [QRDT] 6474 6399 - Thr CGT [ENA] ¡û
>W1810884427 QUMP01000039 Alphaproteobacteria Rhodopseudomonas thermotolerans JA576,NBRC 108863,KCTC 15144 [QUMP] 6474 6399 - Thr CGT [ENA] ¡û
>W10112834 ADFI01000025 Alphaproteobacteria Rhodopseudomonas palustris DX-1 [ADFI] 29568 29643 + Thr CGT [ENA] ¡û
>W10118841 ADVE01000054 Alphaproteobacteria Methylosinus trichosporium OB3b [ADVE] 6343 6268 - Thr CGT [ENA] ¡û
>C10110737 CP001096 Alphaproteobacteria Rhodopseudomonas palustris TIE-1 [CP001096] 276776 276851 + Thr CGT [Ensembl] ¡û
>W11116061 ADFI01000025 Alphaproteobacteria Rhodopseudomonas palustris DX-1 [ADFI] 29568 29643 + Thr CGT [ENA] ¡û
>C11118780 CP002418 Alphaproteobacteria Rhodopseudomonas palustris [CP002418] 413476 413401 - Thr CGT [Ensembl] ¡û
>W11125013 ADVE01000054 Alphaproteobacteria Methylosinus trichosporium OB3b [ADVE] 6343 6268 - Thr CGT [ENA] ¡û
>W1511533283 JYMR01000045 Alphaproteobacteria Bradyrhizobium sp. LTSP849 [JYMR] 168494 168419 - Thr CGT [ENA] ¡û
>W1511533316 JYMS01000027 Alphaproteobacteria Bradyrhizobium sp. LTSP857 [JYMS] 176836 176761 - Thr CGT [ENA] ¡û
>W121127089 CAFH01000183 Alphaproteobacteria Bradyrhizobium sp. ORS 285 [CAFH] 5454 5529 + Thr CGT [ENA] ¡û
>W121127127 CAFI01000187 Alphaproteobacteria Bradyrhizobium sp. ORS 375 [CAFI] 88 13 - Thr CGT [ENA] ¡û
>W121127159 CAFJ01000087 Alphaproteobacteria Bradyrhizobium sp. STM 3809 [CAFJ] 7325 7250 - Thr CGT [ENA] ¡û
>W121067964 AJTV01000001 Alphaproteobacteria Methylocystis parvus OBBP [AJTV] 63898 63973 + Thr CGT [ENA] ¡û
>W121103231 AKZI01000130 Alphaproteobacteria Rhodovulum sp. PH10 [AKZI] 10935 11010 + Thr CGT [ENA] ¡û
>C131000842 AP012603 Alphaproteobacteria Bradyrhizobium oligotrophicum S58 [AP012603] 317402 317327 - Thr CGT [Ensembl] ¡û
>W1610649519 LJIC01000058 Alphaproteobacteria Rhodopseudomonas sp. AAP120 [LJIC] 5540 5615 + Thr CGT [ENA] ¡û
>W1610941005 LUUM01000004 Alphaproteobacteria Methylosinus sp. R-45379 [LUUM] 4791 4716 - Thr CGT [ENA] ¡û
>WENV077771 AAFX01104366 Soil microbial communities from Minnesota Farm 239 316 + Thr CGT [ENA]
>W1611012785 LXWX01000117 Alphaproteobacteria Methylosinus sp. 3S-1 [LXWX] 13654 13579 - Thr CGT [ENA] ¡û
>W1710548432 FODT01000017 Alphaproteobacteria Rhodopseudomonas pseudopalustris [FODT] 32847 32922 + Thr CGT [ENA] ¡û
>W1710553270 FOHL01000006 Alphaproteobacteria Oceanicella actignis xiamenense [FOHL] 125849 125774 - Thr CGT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK