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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.248046 (212 seq.)
>W1710867765
LMIO01000001
Actinomycetota
Leifsonia sp. Root227 [LMIO]
595900
595975
+
Trp
CCA
[ENA]
¡û
>W1710869883
LMKB01000005
Actinomycetota
Frigoribacterium sp. Leaf8 [LMKB]
984050
983977
-
Trp
CCA
[ENA]
¡û
>W1710870618
LMKQ01000004
Actinomycetota
Agromyces sp. Leaf222 [LMKQ]
135245
135320
+
Trp
CCA
[ENA]
¡û
>W1710872721
LMMF01000001
Actinomycetota
Frigoribacterium sp. Leaf254 [LMMF]
350098
350171
+
Trp
CCA
[ENA]
¡û
>W1710873139
LMMO01000003
Actinomycetota
Frigoribacterium sp. Leaf263 [LMMO]
85834
85907
+
Trp
CCA
[ENA]
¡û
>W1710875842
LMOS01000004
Actinomycetota
Curtobacterium sp. Leaf154 [LMOS]
537610
537685
+
Trp
CCA
[ENA]
¡û
>W1710876049
LMOX01000001
Actinomycetota
Frigoribacterium sp. Leaf164 [LMOX]
581341
581414
+
Trp
CCA
[ENA]
¡û
>W1711094537
LTFZ01000054
Actinomycetota
Rothia sp. HMSC065G12 [LTFZ]
115500
115425
-
Trp
CCA
[ENA]
¡û
>W1711098637
LTJT01000049
Actinomycetota
Rothia sp. HMSC058E10 [LTJT]
17865
17940
+
Trp
CCA
[ENA]
¡û
>W1711099291
LTKI01000181
Actinomycetota
Rothia sp. HMSC071F11 [LTKI]
19208
19283
+
Trp
CCA
[ENA]
¡û
>W1711109168
LTUK01000025
Actinomycetota
Rothia sp. HMSC069C01 [LTUK]
87801
87726
-
Trp
CCA
[ENA]
¡û
>W1711113845
LTYQ01000020
Actinomycetota
Rothia sp. HMSC067H10 [LTYQ]
19046
19121
+
Trp
CCA
[ENA]
¡û
>W1711456000
MJAK01000004
Actinomycetota
Curtobacterium sp. ER1/6 [MJAK]
85245
85320
+
Trp
CCA
[ENA]
¡û
>W1711460962
MJGJ01000038
Actinomycetota
Curtobacterium sp. MCBA15_003 [MJGJ]
367428
367501
+
Trp
CCA
[ENA]
¡û
>W1711461049
MJGL01000056
Actinomycetota
Curtobacterium sp. MCBA15_005 [MJGL]
89219
89144
-
Trp
CCA
[ENA]
¡û
>W1711461091
MJGM01000034
Actinomycetota
Curtobacterium sp. MCBA15_007 [MJGM]
110949
110874
-
Trp
CCA
[ENA]
¡û
>W1711461107
MJGN01000001
Actinomycetota
Curtobacterium sp. MCBA15_008 [MJGN]
187058
186985
-
Trp
CCA
[ENA]
¡û
>W1711461263
MJGQ01000013
Actinomycetota
Curtobacterium sp. MCBA15_013 [MJGQ]
50400
50473
+
Trp
CCA
[ENA]
¡û
>W1711461323
MJGR01000076
Actinomycetota
Curtobacterium sp. MCBA15_016 [MJGR]
47865
47938
+
Trp
CCA
[ENA]
¡û
>W1711461415
MJGT01000105
Actinomycetota
Curtobacterium sp. MMLR14_002 [MJGT]
58798
58873
+
Trp
CCA
[ENA]
¡û
>W1711461453
MJGU01000023
Actinomycetota
Curtobacterium sp. MMLR14_006 [MJGU]
364228
364301
+
Trp
CCA
[ENA]
¡û
>W1711461582
MJGX01000069
Actinomycetota
Curtobacterium sp. MMLR14_014 [MJGX]
41196
41271
+
Trp
CCA
[ENA]
¡û
>W1711961770
NCSR01000033
Actinomycetota
Leifsonia sp. NCR5 [NCSR]
28381
28306
-
Trp
CCA
[ENA]
¡û
>C171063808
CP017580
Actinomycetota
Curtobacterium sp. BH-2-1-1 [CP017580]
2880495
2880568
+
Trp
CCA
-
¡û
>C171083628
CP018783
Actinomycetota
Curtobacterium pusillum AA3 [CP018783]
1175658
1175585
-
Trp
CCA
-
¡û
>W131087454
AOCN01000010
Actinomycetota
Leucobacter salsicius M1-8 [AOCN]
20592
20519
-
Trp
CCA
[ENA]
¡û
>W131217920
ATXF01000006
Actinomycetota
Agromyces italicus DSM 16388 [ATXF]
70695
70620
-
Trp
CCA
[ENA]
¡û
>WENV180097842
MTBK01213958
[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
10
83
+
Trp
CCA
[ENA]
¢þ
>WENV180099667
NMRC01022255
[NMRC] plant metagenome; fluid collected inside the plant's pitcher
6669
6596
-
Trp
CCA
[ENA]
¢þ
>WENV180101149
OAOU01001568
[OAOU] marine metagenome; ENVO:00002010 SEAWATER
1181
1108
-
Trp
CCA
[ENA]
¢þ
>WENV180103082
OAPA01001429
[OAPA] marine metagenome; ENVO:00002010
665
592
-
Trp
CCA
[ENA]
¢þ
>WENV180114321
OAPS01004219
[OAPS] marine metagenome; sea water
250
323
+
Trp
CCA
[ENA]
¢þ
>WENV180209536
OBAL01003277
[OBAL] marine metagenome; ENVO:00002019, 'BRACKISH WATER
995
922
-
Trp
CCA
[ENA]
¢þ
>WENV180363858
OBNZ01013133
[OBNZ] marine metagenome; ENVO:00002010
205
278
+
Trp
CCA
[ENA]
¢þ
>WENV180391641
OBPN01014514
[OBPN] marine metagenome; seawater
76
3
-
Trp
CCA
[ENA]
¢þ
>WENV180399290
OBQH01000610
[OBQH] marine metagenome; ENV:00002010
771
698
-
Trp
CCA
[ENA]
¢þ
>WENV180691020
OCZS010048886
[OCZS] soil metagenome; soil
1227
1152
-
Trp
CCA
[ENA]
¢þ
>WENV180697764
ODDE01004126
[ODDE] human metagenome; G_DNA_Supragingival plaque
1888
1815
-
Trp
CCA
[ENA]
¢þ
>WENV180717806
ODGE01003211
[ODGE] human metagenome; G_DNA_Buccal mucosa
42
115
+
Trp
CCA
[ENA]
¢þ
>WENV180725840
ODGS01004190
[ODGS] human metagenome; G_DNA_Attached/Keratinized gingiva
1232
1305
+
Trp
CCA
[ENA]
¢þ
>WENV180725869
ODGS01005400
[ODGS] human metagenome; G_DNA_Attached/Keratinized gingiva
533
460
-
Trp
CCA
[ENA]
¢þ
>WENV180728676
ODGU01076361
[ODGU] human metagenome; G_DNA_Supragingival plaque
396
469
+
Trp
CCA
[ENA]
¢þ
>WENV180734115
ODGZ01002692
[ODGZ] human metagenome; G_DNA_Supragingival plaque
5924
5997
+
Trp
CCA
[ENA]
¢þ
>WENV180734116
ODGZ01002729
[ODGZ] human metagenome; G_DNA_Supragingival plaque
3820
3893
+
Trp
CCA
[ENA]
¢þ
>WENV180735868
ODHB01001330
[ODHB] human metagenome; G_DNA_Supragingival plaque
4514
4441
-
Trp
CCA
[ENA]
¢þ
>WENV180738643
ODHD01000198
[ODHD] human metagenome; G_DNA_Supragingival plaque
52251
52178
-
Trp
CCA
[ENA]
¢þ
>WENV180754839
ODHU01001524
[ODHU] human metagenome; G_DNA_Supragingival plaque
3522
3449
-
Trp
CCA
[ENA]
¢þ
>WENV180778375
ODIM01004642
[ODIM] human metagenome; G_DNA_Supragingival plaque
1827
1900
+
Trp
CCA
[ENA]
¢þ
>WENV180797249
ODJB01040562
[ODJB] human metagenome; G_DNA_Supragingival plaque
512
439
-
Trp
CCA
[ENA]
¢þ
>WENV180797368
ODJB01051281
[ODJB] human metagenome; G_DNA_Supragingival plaque
585
658
+
Trp
CCA
[ENA]
¢þ
>WENV180800477
ODJD01000042
[ODJD] human metagenome; G_DNA_Supragingival plaque
51014
50941
-
Trp
CCA
[ENA]
¢þ
>WENV180822433
ODJT01000919
[ODJT] human metagenome; G_DNA_Supragingival plaque
3107
3180
+
Trp
CCA
[ENA]
¢þ
>WENV180881583
ODMA01007356
[ODMA] human metagenome; G_DNA_Supragingival plaque
228
155
-
Trp
CCA
[ENA]
¢þ
>WENV180887351
ODMI01000284
[ODMI] human metagenome; G_DNA_Buccal mucosa
3498
3571
+
Trp
CCA
[ENA]
¢þ
>WENV180921428
ODTJ01000051
[ODTJ] human metagenome; G_DNA_Supragingival plaque
17616
17689
+
Trp
CCA
[ENA]
¢þ
>WENV180924782
ODTK01015719
[ODTK] human metagenome; G_DNA_Supragingival plaque
1398
1471
+
Trp
CCA
[ENA]
¢þ
>WENV180925169
ODTK01049105
[ODTK] human metagenome; G_DNA_Supragingival plaque
458
385
-
Trp
CCA
[ENA]
¢þ
>WENV180927416
ODTM01000494
[ODTM] human metagenome; G_DNA_Supragingival plaque
2964
2891
-
Trp
CCA
[ENA]
¢þ
>WENV180927445
ODTM01000590
[ODTM] human metagenome; G_DNA_Supragingival plaque
12395
12468
+
Trp
CCA
[ENA]
¢þ
>WENV180937992
ODTX01000342
[ODTX] human metagenome; G_DNA_Supragingival plaque
20357
20430
+
Trp
CCA
[ENA]
¢þ
>WENV180938281
ODTX01001202
[ODTX] human metagenome; G_DNA_Supragingival plaque
12097
12170
+
Trp
CCA
[ENA]
¢þ
>WENV180951464
ODUH01025186
[ODUH] human metagenome; G_DNA_Subgingival plaque
741
814
+
Trp
CCA
[ENA]
¢þ
>WENV180964434
ODUO01002436
[ODUO] human metagenome; G_DNA_Supragingival plaque
1995
2068
+
Trp
CCA
[ENA]
¢þ
>WENV180964506
ODUO01003614
[ODUO] human metagenome; G_DNA_Supragingival plaque
1977
2050
+
Trp
CCA
[ENA]
¢þ
>WENV180973242
ODUW01002424
[ODUW] human metagenome; G_DNA_Supragingival plaque
4480
4553
+
Trp
CCA
[ENA]
¢þ
>WENV180973368
ODUW01004136
[ODUW] human metagenome; G_DNA_Supragingival plaque
2338
2265
-
Trp
CCA
[ENA]
¢þ
>WENV180975467
ODUY01007310
[ODUY] human metagenome; G_DNA_Supragingival plaque
2337
2264
-
Trp
CCA
[ENA]
¢þ
>WENV180976003
ODUY01037406
[ODUY] human metagenome; G_DNA_Supragingival plaque
253
326
+
Trp
CCA
[ENA]
¢þ
>WENV180980201
ODVD01017712
[ODVD] human metagenome; G_DNA_Buccal mucosa
108
35
-
Trp
CCA
[ENA]
¢þ
>WENV180999219
ODVT01009313
[ODVT] human metagenome; G_DNA_Buccal mucosa
1969
1896
-
Trp
CCA
[ENA]
¢þ
>WENV181007139
ODWD01002611
[ODWD] human metagenome; G_DNA_Buccal mucosa
342
415
+
Trp
CCA
[ENA]
¢þ
>WENV181012300
ODWK01000008
[ODWK] human metagenome; G_DNA_Supragingival plaque
117786
117713
-
Trp
CCA
[ENA]
¢þ
>WENV181025635
ODXB01010237
[ODXB] human metagenome; G_DNA_Buccal mucosa
475
402
-
Trp
CCA
[ENA]
¢þ
>WENV181029310
ODXF01000070
[ODXF] human metagenome; G_DNA_Supragingival plaque
37299
37226
-
Trp
CCA
[ENA]
¢þ
>WENV181029689
ODXF01001951
[ODXF] human metagenome; G_DNA_Supragingival plaque
4156
4083
-
Trp
CCA
[ENA]
¢þ
>WENV181042758
ODXU01006182
[ODXU] human metagenome; G_DNA_Buccal mucosa
598
525
-
Trp
CCA
[ENA]
¢þ
>WENV181046931
ODXX01027067
[ODXX] human metagenome; G_DNA_Buccal mucosa
193
266
+
Trp
CCA
[ENA]
¢þ
>WENV181065317
ODYT01000900
[ODYT] human metagenome; G_DNA_Buccal mucosa
3923
3850
-
Trp
CCA
[ENA]
¢þ
>WENV181066978
ODZI01004290
[ODZI] human metagenome; G_DNA_Supragingival plaque
2337
2264
-
Trp
CCA
[ENA]
¢þ
>WENV181067069
ODZI01005813
[ODZI] human metagenome; G_DNA_Supragingival plaque
2454
2381
-
Trp
CCA
[ENA]
¢þ
>WENV181082193
OEAT01000033
[OEAT] human metagenome; G_DNA_Supragingival plaque
18626
18699
+
Trp
CCA
[ENA]
¢þ
>WENV181082204
OEAT01000040
[OEAT] human metagenome; G_DNA_Supragingival plaque
61023
60950
-
Trp
CCA
[ENA]
¢þ
>WENV181090849
OEBC01004729
[OEBC] human metagenome; G_DNA_Supragingival plaque
8
81
+
Trp
CCA
[ENA]
¢þ
>WENV181101097
OECM01003211
[OECM] human metagenome; G_DNA_Buccal mucosa
893
820
-
Trp
CCA
[ENA]
¢þ
>WENV181107209
OEEI01003260
[OEEI] human metagenome; G_DNA_Supragingival plaque
4669
4742
+
Trp
CCA
[ENA]
¢þ
>WENV181107433
OEEI01007525
[OEEI] human metagenome; G_DNA_Supragingival plaque
1398
1325
-
Trp
CCA
[ENA]
¢þ
>WENV181144752
OEHO01080211
[OEHO] metagenome; unknown
139
212
+
Trp
CCA
[ENA]
¢þ
>WENV181146064
OEHQ01000705
[OEHQ] human metagenome; G_DNA_Supragingival plaque
3959
3886
-
Trp
CCA
[ENA]
¢þ
>WENV181146245
OEHQ01002229
[OEHQ] human metagenome; G_DNA_Supragingival plaque
4177
4104
-
Trp
CCA
[ENA]
¢þ
>WENV181155996
OEIE01001570
[OEIE] human metagenome; G_DNA_Supragingival plaque
4452
4379
-
Trp
CCA
[ENA]
¢þ
>WENV181156086
OEIE01002945
[OEIE] human metagenome; G_DNA_Supragingival plaque
3014
3087
+
Trp
CCA
[ENA]
¢þ
>WENV181179226
OEJT01002144
[OEJT] human metagenome; G_DNA_Supragingival plaque
4396
4323
-
Trp
CCA
[ENA]
¢þ
>WENV181179510
OEJT01006513
[OEJT] human metagenome; G_DNA_Supragingival plaque
2018
1945
-
Trp
CCA
[ENA]
¢þ
>WENV181180789
OEJU01001045
[OEJU] human metagenome; G_DNA_Supragingival plaque
9907
9980
+
Trp
CCA
[ENA]
¢þ
>WENV181181188
OEJU01008873
[OEJU] human metagenome; G_DNA_Supragingival plaque
767
840
+
Trp
CCA
[ENA]
¢þ
>WENV181298497
OFHL01120763
[OFHL] soil metagenome; Clay
247
172
-
Trp
CCA
[ENA]
¢þ
>WENV181322557
OFKT01000948
[OFKT] marine metagenome; sea ice
526
599
+
Trp
CCA
[ENA]
¢þ
>WENV181323750
OFKZ01002263
[OFKZ] marine metagenome; sea ice
604
531
-
Trp
CCA
[ENA]
¢þ
>WENV181370053
OFQR01009283
[OFQR] freshwater metagenome; Freshwater Lake
349
422
+
Trp
CCA
[ENA]
¢þ
>WENV181385231
OFRI01052095
[OFRI] wastewater metagenome; Exp Tend VB 90WW
553
480
-
Trp
CCA
[ENA]
¢þ
>W141171020
AXZG01000015
Actinomycetota
Rothia aeria F0184 [AXZG]
55375
55450
+
Trp
CCA
[ENA]
¡û
>WENV182540430
OJAJ01000828
[OJAJ] seawater metagenome; Sea water
1561
1488
-
Trp
CCA
[ENA]
¢þ
>WENV182540936
OJAQ01000578
[OJAQ] seawater metagenome; Sea water
3747
3820
+
Trp
CCA
[ENA]
¢þ
>WENV182544244
OJBF01000140
[OJBF] seawater metagenome; Sea water
1610
1683
+
Trp
CCA
[ENA]
¢þ
>WENV182545695
OJBN01015761
[OJBN] seawater metagenome; Sea water
250
177
-
Trp
CCA
[ENA]
¢þ
>WENV182554077
OJCT01000642
[OJCT] seawater metagenome; Sea water
977
904
-
Trp
CCA
[ENA]
¢þ
>WENV182558473
OJDM01005401
[OJDM] seawater metagenome; Sea water
661
734
+
Trp
CCA
[ENA]
¢þ
>WENV182561620
OJDX01000128
[OJDX] seawater metagenome; Sea water
5616
5689
+
Trp
CCA
[ENA]
¢þ
>WENV182574709
OJFS01000681
[OJFS] seawater metagenome; Sea water
5179
5252
+
Trp
CCA
[ENA]
¢þ
>WENV182577944
OJGM01000081
[OJGM] seawater metagenome; Sea water
5728
5801
+
Trp
CCA
[ENA]
¢þ
>WENV182583148
OJHD01000500
[OJHD] seawater metagenome; Sea water
2479
2552
+
Trp
CCA
[ENA]
¢þ
>WENV182584872
OJHG01021599
[OJHG] seawater metagenome; Sea water
165
238
+
Trp
CCA
[ENA]
¢þ
>WENV183054606
OLGU01000331
[OLGU] seawater metagenome; Sea water
5057
5130
+
Trp
CCA
[ENA]
¢þ
>WENV183055091
OLGW01006953
[OLGW] seawater metagenome; Sea water
343
416
+
Trp
CCA
[ENA]
¢þ
>WENV183059002
OLHS01000829
[OLHS] seawater metagenome; Sea water
2251
2324
+
Trp
CCA
[ENA]
¢þ
>WENV183508331
OMHC01003467
[OMHC] human oral metagenome; human oral
315
388
+
Trp
CCA
[ENA]
¢þ
>WENV183618507
OOFO01003692
[OOFO] marine metagenome; seawater
721
794
+
Trp
CCA
[ENA]
¢þ
>WENV183619151
OOFP01034319
[OOFP] marine metagenome; seawater
147
220
+
Trp
CCA
[ENA]
¢þ
>WENV183620899
OOFT01000010
[OOFT] marine metagenome; sea ice
8424
8497
+
Trp
CCA
[ENA]
¢þ
>WENV183621478
OOFU01002333
[OOFU] marine metagenome; sea ice
1489
1562
+
Trp
CCA
[ENA]
¢þ
>WENV183622945
OOFW01059416
[OOFW] marine metagenome; sea ice
196
123
-
Trp
CCA
[ENA]
¢þ
>WENV183628911
OOGO01061995
[OOGO] marine metagenome; sea ice
446
373
-
Trp
CCA
[ENA]
¢þ
>WENV183725782
PJQF01016043
[PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm
9
82
+
Trp
CCA
[ENA]
¢þ
>WENV183729472
PJTQ01045511
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
476
403
-
Trp
CCA
[ENA]
¢þ
>WENV170010236
APMI01011250
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
1140
1213
+
Trp
CCA
[ENA]
¢þ
>WENV170120190
CENJ01214473
[CENJ] marine metagenome genome assembly TARA_009_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
140
65
-
Trp
CCA
[ENA]
¢þ
>WENV170570753
FLOH01000020
[FLOH] marine metagenome; water
480932
480857
-
Trp
CCA
[ENA]
¢þ
>WENV170572808
FLOH01001317
[FLOH] marine metagenome; water
9042
9117
+
Trp
CCA
[ENA]
¢þ
>WENV170601550
FUWD010179143
[FUWD] metagenome; unknown
177
104
-
Trp
CCA
[ENA]
¢þ
>WENV170606173
FUWD010627408
[FUWD] metagenome; unknown
362
289
-
Trp
CCA
[ENA]
¢þ
>WENV170609423
FUWD011394730
[FUWD] metagenome; unknown
168
241
+
Trp
CCA
[ENA]
¢þ
>WENV170624784
FUWD013186723
[FUWD] metagenome; unknown
1033
1108
+
Trp
CCA
[ENA]
¢þ
>WENV170626488
FUWD013223487
[FUWD] metagenome; unknown
1007
932
-
Trp
CCA
[ENA]
¢þ
>WENV170626774
FUWD013229402
[FUWD] metagenome; unknown
4045
4118
+
Trp
CCA
[ENA]
¢þ
>WENV170626836
FUWD013229769
[FUWD] metagenome; unknown
33316
33391
+
Trp
CCA
[ENA]
¢þ
>WENV170627187
FUWD013231925
[FUWD] metagenome; unknown
2709
2784
+
Trp
CCA
[ENA]
¢þ
>WENV170627188
FUWD013231926
[FUWD] metagenome; unknown
1742
1817
+
Trp
CCA
[ENA]
¢þ
>WENV170627465
FUWD013232897
[FUWD] metagenome; unknown
12644
12719
+
Trp
CCA
[ENA]
¢þ
>WENV170627518
FUWD013233003
[FUWD] metagenome; unknown
29306
29381
+
Trp
CCA
[ENA]
¢þ
>WENV170632451
FUWD013382574
[FUWD] metagenome; unknown
2709
2784
+
Trp
CCA
[ENA]
¢þ
>WENV170632452
FUWD013382575
[FUWD] metagenome; unknown
1742
1817
+
Trp
CCA
[ENA]
¢þ
>WENV170633894
FUWD013405120
[FUWD] metagenome; unknown
12052
11979
-
Trp
CCA
[ENA]
¢þ
>WENV170711957
LNFM01008636
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
8922
8995
+
Trp
CCA
[ENA]
¢þ
>WENV170922954
MDTG01040492
[MDTG] marine metagenome; seawater
5265
5338
+
Trp
CCA
[ENA]
¢þ
>WENV170951163
MEHZ011539606
[MEHZ] marine metagenome; marine surface water
3546
3471
-
Trp
CCA
[ENA]
¢þ
>WENV170952171
MEHZ011586859
[MEHZ] marine metagenome; marine surface water
2979
2904
-
Trp
CCA
[ENA]
¢þ
>C181169618
CP028913
Actinomycetota
Agromyces badenianii MF30-A [CP028913]
427378
427451
+
Trp
CCA
-
¡û
>C181194469
CP030929
Actinomycetota
Aurantimicrobium sp. MWH-Uga1 [CP030929]
1398189
1398116
-
Trp
CCA
-
¡û
>C191143858
CP035491
Actinomycetota
Agromyces protaetiae FW100M-8 [CP035491]
293940
293867
-
Trp
CCA
-
¡û
>C191183333
CP040872
Actinomycetota
Agromyces laixinhei HY052 [CP040872]
3355092
3355019
-
Trp
CCA
-
¡û
>W1910231933
FPEG01000003
Actinomycetota
Agrococcus sp. Marseille-P2731 [FPEG]
407960
407887
-
Trp
CCA
[ENA]
¡û
>W1911681998
QKLC01000010
Actinomycetota
Curtobacterium sp. MCPF17_003 [QKLC]
87024
86951
-
Trp
CCA
[ENA]
¡û
>W1911685551
QKTM01000002
Actinomycetota
Curtobacterium sp. MCBD17_035 [QKTM]
63585
63658
+
Trp
CCA
[ENA]
¡û
>W1911685611
QKTN01000005
Actinomycetota
Curtobacterium sp. MCBD17_034 [QKTN]
235182
235109
-
Trp
CCA
[ENA]
¡û
>W1911685740
QKTQ01000005
Actinomycetota
Curtobacterium sp. MCBD17_028 [QKTQ]
186542
186469
-
Trp
CCA
[ENA]
¡û
>W1911685891
QKTT01000011
Actinomycetota
Curtobacterium sp. MCBD17_019 [QKTT]
60953
60880
-
Trp
CCA
[ENA]
¡û
>W1810054030
PDEV01000001
Actinomycetota
Rothia dentocariosa OG2-2 [PDEV]
1072179
1072106
-
Trp
CCA
[ENA]
¡û
>W1810058115
PDJE01000001
Actinomycetota
Microbacterium agarici DSM 21798 [PDJE]
82272
82199
-
Trp
CCA
[ENA]
¡û
>W1810121352
PHUH01000001
Actinomycetota
Microcella sp. HL-107 [PHUH]
2006065
2006138
+
Trp
CCA
[ENA]
¡û
>W1810169234
PJJX01000002
Actinomycetota
Terrimesophilobacter mesophilus CGMCC1.10440 [PJJX]
1794322
1794395
+
Trp
CCA
[ENA]
¡û
>W1810188897
PKIR01000002
Actinomycetota
Rothia dentocariosa UMB0083 [PKIR]
186720
186647
-
Trp
CCA
[ENA]
¡û
>W1810277520
PSTX01000016
Actinomycetota
Pseudoclavibacter sp. RFBJ5 [PSTX]
215786
215713
-
Trp
CCA
[ENA]
¡û
>W1810282041
PSXX01000005
Actinomycetota
Pseudoclavibacter sp. AY1H1 [PSXX]
216187
216114
-
Trp
CCA
[ENA]
¡û
>W1810282132
PSXZ01000013
Actinomycetota
Pseudoclavibacter sp. RFBJ3 [PSXZ]
215785
215712
-
Trp
CCA
[ENA]
¡û
>W1810282158
PSYA01000004
Actinomycetota
Pseudoclavibacter sp. RFBI5 [PSYA]
35544
35617
+
Trp
CCA
[ENA]
¡û
>W1810282239
PSYB01000015
Actinomycetota
Pseudoclavibacter sp. RFBI4 [PSYB]
216369
216296
-
Trp
CCA
[ENA]
¡û
>W1810282258
PSYC01000014
Actinomycetota
Pseudoclavibacter sp. RFBG4 [PSYC]
1584
1657
+
Trp
CCA
[ENA]
¡û
>W1810657140
QJHB01000001
Actinomycetota
Homoserinimonas sp. OAct 916 [QJHB]
506317
506244
-
Trp
CCA
[ENA]
¡û
>W1810680938
QKSM01000002
Actinomycetota
Curtobacterium sp. MCSS17_008 [QKSM]
161451
161524
+
Trp
CCA
[ENA]
¡û
>W1810681045
QKSO01000007
Actinomycetota
Curtobacterium sp. MCSS17_006 [QKSO]
119630
119703
+
Trp
CCA
[ENA]
¡û
>W1810681088
QKSP01000006
Actinomycetota
Curtobacterium sp. MCSS17_005 [QKSP]
169612
169539
-
Trp
CCA
[ENA]
¡û
>W1810681158
QKSQ01000009
Actinomycetota
Curtobacterium sp. MCSS17_016 [QKSQ]
130465
130538
+
Trp
CCA
[ENA]
¡û
>W1810681389
QKSV01000006
Actinomycetota
Curtobacterium sp. MCLR17_058 [QKSV]
12010
12083
+
Trp
CCA
[ENA]
¡û
>W1810681572
QKSZ01000004
Actinomycetota
Curtobacterium sp. MCLR17_053 [QKSZ]
59894
59967
+
Trp
CCA
[ENA]
¡û
>W1810681615
QKTA01000001
Actinomycetota
Curtobacterium sp. MCLR17_051 [QKTA]
178570
178497
-
Trp
CCA
[ENA]
¡û
>W1810681719
QKTC01000009
Actinomycetota
Curtobacterium sp. MCLR17_044 [QKTC]
131088
131161
+
Trp
CCA
[ENA]
¡û
>W1810681894
QKTG01000009
Actinomycetota
Curtobacterium sp. MCLR17_036 [QKTG]
37578
37505
-
Trp
CCA
[ENA]
¡û
>W1810682026
QKTJ01000001
Actinomycetota
Curtobacterium sp. MCLR17_031 [QKTJ]
261092
261165
+
Trp
CCA
[ENA]
¡û
>W1810860818
QTTL01000001
Actinomycetota
Agromyces sp. OV429 [QTTL]
849670
849743
+
Trp
CCA
[ENA]
¡û
>W1810886045
QUNT01000002
Actinomycetota
Agromyces sp. OV568 [QUNT]
250627
250554
-
Trp
CCA
[ENA]
¡û
>SRA1014721
SRR023845.282491
Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
147
220
+
Trp
CCA
[SRA]
>SRA1031515
SRR035087.441824
454 Sequencing (SRP001808)
439
364
-
Trp
CCA
[SRA]
>SRA1031524
SRR035087.443337
454 Sequencing (SRP001808)
232
159
-
Trp
CCA
[SRA]
>SRA1031652
SRR035087.464775
454 Sequencing (SRP001808)
177
102
-
Trp
CCA
[SRA]
>SRA1045661
SRR035093.142776
454 Sequencing (SRP001814)
298
373
+
Trp
CCA
[SRA]
>SRA1046493
SRR035093.319487
454 Sequencing (SRP001814)
202
277
+
Trp
CCA
[SRA]
>SRA1046591
SRR035093.338955
454 Sequencing (SRP001814)
187
262
+
Trp
CCA
[SRA]
>W10111912
ADDW01000005
Actinomycetota
Rothia dentocariosa M567 [ADDW]
184794
184719
-
Trp
CCA
[ENA]
¡û
>W11114889
ADDW01000005
Actinomycetota
Rothia dentocariosa M567 [ADDW]
184794
184719
-
Trp
CCA
[ENA]
¡û
>W1511316300
JPVS01000018
Actinomycetota
Rothia aeria C6D [JPVS]
26931
27006
+
Trp
CCA
[ENA]
¡û
>C161021925
CP009755
Actinomycetota
Curtobacterium sp. MR_MD2014 [CP009755]
2400187
2400112
-
Trp
CCA
[Ensembl]
¡û
>W121063448
AJKR01000001
Actinomycetota
Candidatus Aquiluna sp. IMCC13023 [AJKR]
9515
9590
+
Trp
CCA
[ENA]
¡û
>W1610050672
BBGC01000159
Actinomycetota
Agromyces mediolanus JCM 9631 [BBGC]
416
491
+
Trp
CCA
[ENA]
¡û
>W1610112249
CZJS01000129
Actinomycetota
Pseudoclavibacter helvolus [CZJS]
21029
20956
-
Trp
CCA
[ENA]
¡û
>W1610112522
CZJY01000035
Actinomycetota
Pseudoclavibacter helvolus [CZJY]
46108
46035
-
Trp
CCA
[ENA]
¡û
>W1610590038
LDRC01000048
Actinomycetota
Curtobacterium oceanosedimentum [LDRC]
5347
5422
+
Trp
CCA
[ENA]
¡û
>W1610620619
LHOZ01000070
Actinomycetota
Frigoribacterium sp. RIT-PI-h [LHOZ]
65587
65660
+
Trp
CCA
[ENA]
¡û
>W1610730111
LMIO01000001
Actinomycetota
Leifsonia sp. Root227 [LMIO]
595900
595975
+
Trp
CCA
[ENA]
¡û
>W1610732229
LMKB01000005
Actinomycetota
Frigoribacterium sp. Leaf8 [LMKB]
984050
983977
-
Trp
CCA
[ENA]
¡û
>W1610732964
LMKQ01000004
Actinomycetota
Agromyces sp. Leaf222 [LMKQ]
135245
135320
+
Trp
CCA
[ENA]
¡û
>W1610735067
LMMF01000001
Actinomycetota
Frigoribacterium sp. Leaf254 [LMMF]
350098
350171
+
Trp
CCA
[ENA]
¡û
>W1610735485
LMMO01000003
Actinomycetota
Frigoribacterium sp. Leaf263 [LMMO]
85834
85907
+
Trp
CCA
[ENA]
¡û
>W1610738188
LMOS01000004
Actinomycetota
Curtobacterium sp. Leaf154 [LMOS]
537610
537685
+
Trp
CCA
[ENA]
¡û
>W1610738395
LMOX01000001
Actinomycetota
Frigoribacterium sp. Leaf164 [LMOX]
581341
581414
+
Trp
CCA
[ENA]
¡û
>WENV080856
ABEF01007767
Marine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA)
1426
1501
+
Trp
CCA
[ENA]
>W1710047071
BBGC01000159
Actinomycetota
Agromyces mediolanus JCM 9631 [BBGC]
416
491
+
Trp
CCA
[ENA]
¡û
>W1710114953
CZJS01000129
Actinomycetota
Pseudoclavibacter helvolus [CZJS]
21029
20956
-
Trp
CCA
[ENA]
¡û
>W1710115226
CZJY01000035
Actinomycetota
Pseudoclavibacter helvolus [CZJY]
46108
46035
-
Trp
CCA
[ENA]
¡û
>W1710532048
FNPZ01000006
Actinomycetota
Herbiconiux ginsengi [FNPZ]
5378
5451
+
Trp
CCA
[ENA]
¡û
>W1710570902
FOVM01000001
Actinomycetota
Mycetocola miduiensis [FOVM]
280600
280527
-
Trp
CCA
[ENA]
¡û
>W1710709318
LDRC01000048
Actinomycetota
Curtobacterium oceanosedimentum [LDRC]
5347
5422
+
Trp
CCA
[ENA]
¡û
>W1710748313
LHOZ01000070
Actinomycetota
Frigoribacterium sp. RIT-PI-h [LHOZ]
65587
65660
+
Trp
CCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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