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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.248752 (225 seq.)
>W1710892659
LNDZ01000013
Betaproteobacteria
Betaproteobacteria bacterium Ga0074130 [LNDZ]
213432
213507
+
Gly
GCC
[ENA]
¡û
>W1710892661
LNDZ01000013
Betaproteobacteria
Betaproteobacteria bacterium Ga0074130 [LNDZ]
213666
213741
+
Gly
GCC
[ENA]
¡û
>W1710925670
LODL01000009
Betaproteobacteria
Dechloromonas denitrificans [LODL]
308
233
-
Gly
GCC
[ENA]
¡û
>W1710925679
LODL01000019
Betaproteobacteria
Dechloromonas denitrificans [LODL]
105515
105590
+
Gly
GCC
[ENA]
¡û
>W1711413576
MGWO01000001
Betaproteobacteria
Gallionellales bacterium GWA2_54_124 [MGWO]
54998
55073
+
Gly
GCC
[ENA]
¡û
>W1711413847
MGXE01000122
Betaproteobacteria
Gallionellales bacterium RIFOXYD12_FULL_53_10 [MGXE]
16499
16424
-
Gly
GCC
[ENA]
¡û
>W1711430715
MIJG01000006
Betaproteobacteria
Herbaspirillum camelliae WT00C [MIJG]
780229
780304
+
Gly
GCC
[ENA]
¡û
>W1711430717
MIJG01000006
Betaproteobacteria
Herbaspirillum camelliae WT00C [MIJG]
780542
780617
+
Gly
GCC
[ENA]
¡û
>W1711430723
MIJG01000008
Betaproteobacteria
Herbaspirillum camelliae WT00C [MIJG]
41959
42034
+
Gly
GCC
[ENA]
¡û
>W1711718046
MTHD01000002
Betaproteobacteria
Azonexus hydrophilus [MTHD]
276204
276279
+
Gly
GCC
[ENA]
¡û
>W1711718062
MTHD01000002
Betaproteobacteria
Azonexus hydrophilus [MTHD]
532370
532295
-
Gly
GCC
[ENA]
¡û
>W1711718064
MTHD01000002
Betaproteobacteria
Azonexus hydrophilus [MTHD]
532161
532086
-
Gly
GCC
[ENA]
¡û
>W1711765120
MUXB01000114
Betaproteobacteria
Herbaspirillum sp. VT-16-41 [MUXB]
36033
36108
+
Gly
GCC
[ENA]
¡û
>W1711765122
MUXB01000114
Betaproteobacteria
Herbaspirillum sp. VT-16-41 [MUXB]
36346
36421
+
Gly
GCC
[ENA]
¡û
>W1711765123
MUXB01000114
Betaproteobacteria
Herbaspirillum sp. VT-16-41 [MUXB]
36474
36549
+
Gly
GCC
[ENA]
¡û
>W1711765124
MUXB01000114
Betaproteobacteria
Herbaspirillum sp. VT-16-41 [MUXB]
36602
36677
+
Gly
GCC
[ENA]
¡û
>W1711765135
MUXB01000138
Betaproteobacteria
Herbaspirillum sp. VT-16-41 [MUXB]
77
2
-
Gly
GCC
[ENA]
¡û
>W1712110251
NJGU01000001
Betaproteobacteria
Herbaspirillum robiniae HZ10 [NJGU]
650486
650411
-
Gly
GCC
[ENA]
¡û
>W1712110253
NJGU01000001
Betaproteobacteria
Herbaspirillum robiniae HZ10 [NJGU]
650170
650095
-
Gly
GCC
[ENA]
¡û
>W1712110254
NJGU01000001
Betaproteobacteria
Herbaspirillum robiniae HZ10 [NJGU]
650040
649965
-
Gly
GCC
[ENA]
¡û
>W1712110303
NJGV01000002
Betaproteobacteria
Herbaspirillum aquaticum [NJGV]
46624
46699
+
Gly
GCC
[ENA]
¡û
>W1712110305
NJGV01000002
Betaproteobacteria
Herbaspirillum aquaticum [NJGV]
46937
47012
+
Gly
GCC
[ENA]
¡û
>W1712110306
NJGV01000002
Betaproteobacteria
Herbaspirillum aquaticum [NJGV]
47066
47141
+
Gly
GCC
[ENA]
¡û
>W1712110307
NJGV01000002
Betaproteobacteria
Herbaspirillum aquaticum [NJGV]
47195
47270
+
Gly
GCC
[ENA]
¡û
>C171021203
CP013136
Betaproteobacteria
Herbaspirillum seropedicae AU14040 [CP013136]
2175235
2175310
+
Gly
GCC
-
¡û
>C171021205
CP013136
Betaproteobacteria
Herbaspirillum seropedicae AU14040 [CP013136]
2175548
2175623
+
Gly
GCC
-
¡û
>C171021206
CP013136
Betaproteobacteria
Herbaspirillum seropedicae AU14040 [CP013136]
2175677
2175752
+
Gly
GCC
-
¡û
>C171021207
CP013136
Betaproteobacteria
Herbaspirillum seropedicae AU14040 [CP013136]
2175807
2175882
+
Gly
GCC
-
¡û
>W131045999
AMSA01000003
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os45 [AMSA]
300276
300351
+
Gly
GCC
[ENA]
¡û
>W131046001
AMSA01000003
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os45 [AMSA]
300590
300665
+
Gly
GCC
[ENA]
¡û
>W131046002
AMSA01000003
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os45 [AMSA]
300718
300793
+
Gly
GCC
[ENA]
¡û
>W131046003
AMSA01000003
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os45 [AMSA]
300846
300921
+
Gly
GCC
[ENA]
¡û
>W131046041
AMSB01000001
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os34 [AMSB]
312329
312404
+
Gly
GCC
[ENA]
¡û
>W131046043
AMSB01000001
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os34 [AMSB]
312643
312718
+
Gly
GCC
[ENA]
¡û
>W131046044
AMSB01000001
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os34 [AMSB]
312771
312846
+
Gly
GCC
[ENA]
¡û
>W131046045
AMSB01000001
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os34 [AMSB]
312899
312974
+
Gly
GCC
[ENA]
¡û
>W131062276
ANJR01000019
Betaproteobacteria
Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR]
108017
107942
-
Gly
GCC
[ENA]
¡û
>W131062278
ANJR01000019
Betaproteobacteria
Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR]
107703
107628
-
Gly
GCC
[ENA]
¡û
>W131062279
ANJR01000019
Betaproteobacteria
Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR]
107574
107499
-
Gly
GCC
[ENA]
¡û
>W131062280
ANJR01000019
Betaproteobacteria
Herbaspirillum huttiense subsp. putei IAM 15032 [ANJR]
107445
107370
-
Gly
GCC
[ENA]
¡û
>W131223565
AUCE01000008
Betaproteobacteria
Azonexus hydrophilus DSM 23864 [AUCE]
180271
180196
-
Gly
GCC
[ENA]
¡û
>W131223567
AUCE01000008
Betaproteobacteria
Azonexus hydrophilus DSM 23864 [AUCE]
180062
179987
-
Gly
GCC
[ENA]
¡û
>WENV180038423
FZPV01000024
[FZPV] metagenome; underground water
8463
8538
+
Gly
GCC
[ENA]
¢þ
>WENV180038556
FZPZ01000043
[FZPZ] metagenome; underground water
1643
1568
-
Gly
GCC
[ENA]
¢þ
>W141003824
AEEC02000014
Betaproteobacteria
Herbaspirillum frisingense GSF30 [AEEC]
75
1
-
Gly
GCC
[ENA]
¡û
>W141003855
AEEC02000091
Betaproteobacteria
Herbaspirillum frisingense GSF30 [AEEC]
75
1
-
Gly
GCC
[ENA]
¡û
>WENV180253053
OBEQ010502270
[OBEQ] groundwater metagenome; groundwater
3
78
+
Gly
GCC
[ENA]
¢þ
>WENV180253055
OBEQ010502270
[OBEQ] groundwater metagenome; groundwater
235
310
+
Gly
GCC
[ENA]
¢þ
>WENV180271717
OBEQ012306040
[OBEQ] groundwater metagenome; groundwater
739
814
+
Gly
GCC
[ENA]
¢þ
>WENV180283799
OBID01003254
[OBID] metagenome; sludge
1032
957
-
Gly
GCC
[ENA]
¢þ
>WENV180283841
OBID01004202
[OBID] metagenome; sludge
2233
2308
+
Gly
GCC
[ENA]
¢þ
>WENV180285125
OBID01236367
[OBID] metagenome; sludge
307
232
-
Gly
GCC
[ENA]
¢þ
>WENV180311752
OBJT01540493
[OBJT] soil metagenome; soil
193
118
-
Gly
GCC
[ENA]
¢þ
>WENV180372678
OBOI01109168
[OBOI] sediment metagenome; sediment
112
37
-
Gly
GCC
[ENA]
¢þ
>WENV180634906
OCRB01155639
[OCRB] metagenome; diffuse fluid
105
30
-
Gly
GCC
[ENA]
¢þ
>WENV181188466
OEOE01143326
[OEOE] activated sludge metagenome; Activated Sludge
156
231
+
Gly
GCC
[ENA]
¢þ
>WENV181231288
OFEK01018201
[OFEK] activated sludge metagenome; Anaerobic digester
1170
1245
+
Gly
GCC
[ENA]
¢þ
>WENV181231604
OFEK01041181
[OFEK] activated sludge metagenome; Anaerobic digester
189
264
+
Gly
GCC
[ENA]
¢þ
>WENV181311074
OFJB01000006
[OFJB] sludge metagenome; sludge
2
77
+
Gly
GCC
[ENA]
¢þ
>WENV181311124
OFJB01000042
[OFJB] sludge metagenome; sludge
46062
46137
+
Gly
GCC
[ENA]
¢þ
>WENV181311140
OFJB01000057
[OFJB] sludge metagenome; sludge
75
1
-
Gly
GCC
[ENA]
¢þ
>WENV181367207
OFPW01002008
[OFPW] freshwater metagenome; Freshwater Lake
625
700
+
Gly
GCC
[ENA]
¢þ
>WENV181367812
OFQD01000525
[OFQD] freshwater metagenome; Freshwater Lake
1549
1474
-
Gly
GCC
[ENA]
¢þ
>WENV181375763
OFQZ01002534
[OFQZ] wastewater metagenome; Exp Tend NO 0WW
3441
3516
+
Gly
GCC
[ENA]
¢þ
>WENV181381155
OFRE01034487
[OFRE] wastewater metagenome; Exp Tend NO 50WW
575
650
+
Gly
GCC
[ENA]
¢þ
>WENV181389715
OFRO01002279
[OFRO] wastewater metagenome; Exp Tend NO 10WW
1883
1808
-
Gly
GCC
[ENA]
¢þ
>WENV181414984
OGCL01002740
[OGCL] hot springs metagenome; Hot spring water
2191
2116
-
Gly
GCC
[ENA]
¢þ
>WENV181414986
OGCL01002740
[OGCL] hot springs metagenome; Hot spring water
1982
1907
-
Gly
GCC
[ENA]
¢þ
>WENV181731308
OGQD01000334
[OGQD] human gut metagenome; faeces
15077
15002
-
Gly
GCC
[ENA]
¢þ
>WENV181731310
OGQD01000334
[OGQD] human gut metagenome; faeces
14872
14797
-
Gly
GCC
[ENA]
¢þ
>WENV181843400
OGVU01012310
[OGVU] freshwater metagenome; freshwater
665
740
+
Gly
GCC
[ENA]
¢þ
>WENV181857100
OGWN01050899
[OGWN] freshwater metagenome; freshwater
288
363
+
Gly
GCC
[ENA]
¢þ
>W141258877
CBXX010000001
Betaproteobacteria
Herbaspirillum sp. RV1423 [CBXX]
154909
154834
-
Gly
GCC
[ENA]
¡û
>W141258879
CBXX010000001
Betaproteobacteria
Herbaspirillum sp. RV1423 [CBXX]
154614
154539
-
Gly
GCC
[ENA]
¡û
>WENV183727195
PJTO01011732
[PJTO] soil metagenome; Soil (3) enriched on wood chips: beechwood xylan treatment
128
203
+
Gly
GCC
[ENA]
¢þ
>WENV183727962
PJTP01010443
[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment
833
758
-
Gly
GCC
[ENA]
¢þ
>WENV183727963
PJTP01010443
[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment
705
630
-
Gly
GCC
[ENA]
¢þ
>WENV183727964
PJTP01010443
[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment
577
502
-
Gly
GCC
[ENA]
¢þ
>WENV183730206
PJTR01004599
[PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment
6
81
+
Gly
GCC
[ENA]
¢þ
>WENV183731136
PJTS01012233
[PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment
977
902
-
Gly
GCC
[ENA]
¢þ
>WENV183733494
PJTY01002813
[PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment
2971
2896
-
Gly
GCC
[ENA]
¢þ
>WENV183733495
PJTY01002813
[PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment
2813
2738
-
Gly
GCC
[ENA]
¢þ
>WENV183735002
PJUA01000368
[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment
22745
22670
-
Gly
GCC
[ENA]
¢þ
>WENV183735004
PJUA01000368
[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment
22432
22357
-
Gly
GCC
[ENA]
¢þ
>WENV183735005
PJUA01000368
[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment
22304
22229
-
Gly
GCC
[ENA]
¢þ
>WENV183735006
PJUA01000368
[PJUA] soil metagenome; Soil enriched on filter paper: beechwood xylan treatment
22176
22101
-
Gly
GCC
[ENA]
¢þ
>WENV183735904
PJUB01010133
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment
434
359
-
Gly
GCC
[ENA]
¢þ
>WENV183735906
PJUB01010133
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment
116
41
-
Gly
GCC
[ENA]
¢þ
>WENV183735964
PJUB01020537
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment
428
353
-
Gly
GCC
[ENA]
¢þ
>WENV183735966
PJUB01020537
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment
116
41
-
Gly
GCC
[ENA]
¢þ
>WENV183735992
PJUB01026035
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment
3
78
+
Gly
GCC
[ENA]
¢þ
>WENV183736565
PJUC01013598
[PJUC] soil metagenome; Soil enriched on filter paper
852
777
-
Gly
GCC
[ENA]
¢þ
>WENV183736566
PJUC01013598
[PJUC] soil metagenome; Soil enriched on filter paper
724
649
-
Gly
GCC
[ENA]
¢þ
>WENV183738170
PJUD01101325
[PJUD] feces metagenome; Chicken feces (3) enriched on wood chips: beechwood xylan treatment
10
85
+
Gly
GCC
[ENA]
¢þ
>WENV183739226
PJUE01003840
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment
748
823
+
Gly
GCC
[ENA]
¢þ
>WENV183739227
PJUE01003840
[PJUE] feces metagenome; Chicken feces (3) enriched on wood chips: alkali lignin treatment
906
981
+
Gly
GCC
[ENA]
¢þ
>WENV183743584
PJUJ01007908
[PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment
940
1015
+
Gly
GCC
[ENA]
¢þ
>WENV170009332
APMI01000098
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
113506
113431
-
Gly
GCC
[ENA]
¢þ
>WENV170009334
APMI01000098
[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
113295
113220
-
Gly
GCC
[ENA]
¢þ
>WENV170165165
CEON01082471
[CEON] marine metagenome genome assembly TARA_034_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
277
202
-
Gly
GCC
[ENA]
¢þ
>WENV170201185
CEPQ01001629
[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
100
175
+
Gly
GCC
[ENA]
¢þ
>WENV170201186
CEPQ01001629
[CEPQ] marine metagenome genome assembly TARA_038_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
229
304
+
Gly
GCC
[ENA]
¢þ
>W141401175
JDSS02000027
Betaproteobacteria
Candidatus Accumulibacter vicinus sp. SK-01 [JDSS]
65128
65203
+
Gly
GCC
[ENA]
¡û
>W141401208
JDST02000066
Betaproteobacteria
Candidatus Accumulibacter cognatus sp. SK-02 [JDST]
21565
21640
+
Gly
GCC
[ENA]
¡û
>W141402448
JDVG02000465
Betaproteobacteria
Candidatus Accumulibacter phosphatis sp. BA-91 [JDVG]
1679
1604
-
Gly
GCC
[ENA]
¡û
>W141426788
JEMX01000045
Betaproteobacteria
Candidatus Accumulibacter appositus sp. BA-92 [JEMX]
32876
32951
+
Gly
GCC
[ENA]
¡û
>W141426818
JEMY01000009
Betaproteobacteria
Candidatus Accumulibacter regalis sp. BA-93 [JEMY]
47051
47126
+
Gly
GCC
[ENA]
¡û
>W141426835
JEMY01000044
Betaproteobacteria
Candidatus Accumulibacter regalis sp. BA-93 [JEMY]
89634
89709
+
Gly
GCC
[ENA]
¡û
>WENV170639418
JFJP01002524
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
214
139
-
Gly
GCC
[ENA]
¢þ
>WENV170639432
JFJP01002658
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
8928
8853
-
Gly
GCC
[ENA]
¢þ
>WENV170639498
JFJP01003615
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
3297
3372
+
Gly
GCC
[ENA]
¢þ
>WENV170639508
JFJP01003807
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
177
252
+
Gly
GCC
[ENA]
¢þ
>WENV170639551
JFJP01004348
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
2155
2230
+
Gly
GCC
[ENA]
¢þ
>WENV170639553
JFJP01004348
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
5281
5356
+
Gly
GCC
[ENA]
¢þ
>WENV170642137
JFJP01039150
[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
14332
14257
-
Gly
GCC
[ENA]
¢þ
>WENV170669208
LAHR01037739
[LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over
205
280
+
Gly
GCC
[ENA]
¢þ
>WENV170709375
LNFM01000294
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
481
406
-
Gly
GCC
[ENA]
¢þ
>WENV170709377
LNFM01000294
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
247
172
-
Gly
GCC
[ENA]
¢þ
>WENV170975038
MTKY01087699
[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
951
1026
+
Gly
GCC
[ENA]
¢þ
>WENV170975140
MTKY01093611
[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
162
87
-
Gly
GCC
[ENA]
¢þ
>C181060408
CP022187
Betaproteobacteria
Parazoarcus communis TSPY31 [CP022187]
915631
915706
+
Gly
GCC
-
¡û
>C181060410
CP022187
Betaproteobacteria
Parazoarcus communis TSPY31 [CP022187]
915863
915938
+
Gly
GCC
-
¡û
>C181060472
CP022188
Betaproteobacteria
Parazoarcus communis TSNA42 [CP022188]
3719900
3719975
+
Gly
GCC
-
¡û
>C181060474
CP022188
Betaproteobacteria
Parazoarcus communis TSNA42 [CP022188]
3720132
3720207
+
Gly
GCC
-
¡û
>C181071852
CP022736
Betaproteobacteria
Herbaspirillum sp. meg3 [CP022736]
3692705
3692630
-
Gly
GCC
-
¡û
>C181071854
CP022736
Betaproteobacteria
Herbaspirillum sp. meg3 [CP022736]
3692397
3692322
-
Gly
GCC
-
¡û
>C191029334
CP024996
Betaproteobacteria
Herbaspirillum rubrisubalbicans DSM 11543 [CP024996]
2134375
2134450
+
Gly
GCC
-
¡û
>C191029336
CP024996
Betaproteobacteria
Herbaspirillum rubrisubalbicans DSM 11543 [CP024996]
2134688
2134763
+
Gly
GCC
-
¡û
>C191029337
CP024996
Betaproteobacteria
Herbaspirillum rubrisubalbicans DSM 11543 [CP024996]
2134816
2134891
+
Gly
GCC
-
¡û
>C191029338
CP024996
Betaproteobacteria
Herbaspirillum rubrisubalbicans DSM 11543 [CP024996]
2134944
2135019
+
Gly
GCC
-
¡û
>C191081659
CP031842
Betaproteobacteria
Dechloromonas sp. HYN0024 [CP031842]
1526924
1526999
+
Gly
GCC
-
¡û
>C191081661
CP031842
Betaproteobacteria
Dechloromonas sp. HYN0024 [CP031842]
1527134
1527209
+
Gly
GCC
-
¡û
>C191124231
CP034395
Betaproteobacteria
Herbaspirillum seropedicae AU13965 [CP034395]
2068555
2068630
+
Gly
GCC
-
¡û
>C191124233
CP034395
Betaproteobacteria
Herbaspirillum seropedicae AU13965 [CP034395]
2068868
2068943
+
Gly
GCC
-
¡û
>C191124234
CP034395
Betaproteobacteria
Herbaspirillum seropedicae AU13965 [CP034395]
2068998
2069073
+
Gly
GCC
-
¡û
>C191156617
CP037993
Betaproteobacteria
Herbaspirillum huttiense NFYY 53159 [CP037993]
2218159
2218234
+
Gly
GCC
-
¡û
>C191156619
CP037993
Betaproteobacteria
Herbaspirillum huttiense NFYY 53159 [CP037993]
2218472
2218547
+
Gly
GCC
-
¡û
>C191156620
CP037993
Betaproteobacteria
Herbaspirillum huttiense NFYY 53159 [CP037993]
2218601
2218676
+
Gly
GCC
-
¡û
>C191156621
CP037993
Betaproteobacteria
Herbaspirillum huttiense NFYY 53159 [CP037993]
2218730
2218805
+
Gly
GCC
-
¡û
>W09134285
ACSD01000007
Betaproteobacteria
Gallionella capsiferriformans ES-2 [ACSD]
35258
35183
-
Gly
GCC
[ENA]
¡û
>W1910128387
BHVV01000006
Betaproteobacteria
Sulfurisoma sediminicola BSN1 [BHVV]
455319
455394
+
Gly
GCC
[ENA]
¡û
>W1910577840
JUGD01000004
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os38 [JUGD]
170804
170729
-
Gly
GCC
[ENA]
¡û
>W1910577842
JUGD01000004
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os38 [JUGD]
170490
170415
-
Gly
GCC
[ENA]
¡û
>W1910577843
JUGD01000004
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os38 [JUGD]
170362
170287
-
Gly
GCC
[ENA]
¡û
>W1910578275
JWJC01000001
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os44 [JWJC]
296891
296966
+
Gly
GCC
[ENA]
¡û
>W1910578277
JWJC01000001
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os44 [JWJC]
297205
297280
+
Gly
GCC
[ENA]
¡û
>W1910578278
JWJC01000001
Betaproteobacteria
Herbaspirillum rubrisubalbicans Os44 [JWJC]
297333
297408
+
Gly
GCC
[ENA]
¡û
>W1810194049
PKOI01000016
Betaproteobacteria
Herbaspirillum sp. BH-1 [PKOI]
67203
67278
+
Gly
GCC
[ENA]
¡û
>W1810194051
PKOI01000016
Betaproteobacteria
Herbaspirillum sp. BH-1 [PKOI]
67516
67591
+
Gly
GCC
[ENA]
¡û
>W1810194052
PKOI01000016
Betaproteobacteria
Herbaspirillum sp. BH-1 [PKOI]
67644
67719
+
Gly
GCC
[ENA]
¡û
>W1810194053
PKOI01000016
Betaproteobacteria
Herbaspirillum sp. BH-1 [PKOI]
67772
67847
+
Gly
GCC
[ENA]
¡û
>W1810399997
PYFP01000001
Betaproteobacteria
Glaciimonas sp. PCH181 [PYFP]
2123069
2122994
-
Gly
GCC
[ENA]
¡û
>W1810400005
PYFP01000001
Betaproteobacteria
Glaciimonas sp. PCH181 [PYFP]
1363647
1363572
-
Gly
GCC
[ENA]
¡û
>W1810887506
QUQN01000001
Betaproteobacteria
Herbaspirillum sp. 3R-3a1 [QUQN]
1379112
1379037
-
Gly
GCC
[ENA]
¡û
>W1810887508
QUQN01000001
Betaproteobacteria
Herbaspirillum sp. 3R-3a1 [QUQN]
1378827
1378752
-
Gly
GCC
[ENA]
¡û
>C151082354
CP011409
Betaproteobacteria
Herbaspirillum hiltneri N3 [CP011409]
2091895
2091970
+
Gly
GCC
-
¡û
>C151082356
CP011409
Betaproteobacteria
Herbaspirillum hiltneri N3 [CP011409]
2092180
2092255
+
Gly
GCC
-
¡û
>C151087566
CP011930
Betaproteobacteria
Herbaspirillum seropedicae Z67 [CP011930]
2200685
2200760
+
Gly
GCC
[Ensembl]
¡û
>C151087568
CP011930
Betaproteobacteria
Herbaspirillum seropedicae Z67 [CP011930]
2200998
2201073
+
Gly
GCC
[Ensembl]
¡û
>C151087569
CP011930
Betaproteobacteria
Herbaspirillum seropedicae Z67 [CP011930]
2201127
2201202
+
Gly
GCC
[Ensembl]
¡û
>C151087570
CP011930
Betaproteobacteria
Herbaspirillum seropedicae Z67 [CP011930]
2201257
2201332
+
Gly
GCC
[Ensembl]
¡û
>C10101105
CP001715
Betaproteobacteria
Candidatus Accumulibacter regalis [CP001715]
1768549
1768624
+
Gly
GCC
[Ensembl]
¡û
>C10101108
CP001715
Betaproteobacteria
Candidatus Accumulibacter regalis [CP001715]
2148202
2148277
+
Gly
GCC
[Ensembl]
¡û
>C10107104
CP002159
Betaproteobacteria
Gallionella capsiferriformans ES-2 [CP002159]
865735
865810
+
Gly
GCC
[Ensembl]
¡û
>C10107802
CP002039
Betaproteobacteria
Herbaspirillum seropedicae SmR1 [CP002039]
2200985
2201060
+
Gly
GCC
[Ensembl]
¡û
>C10107804
CP002039
Betaproteobacteria
Herbaspirillum seropedicae SmR1 [CP002039]
2201298
2201373
+
Gly
GCC
[Ensembl]
¡û
>C10107805
CP002039
Betaproteobacteria
Herbaspirillum seropedicae SmR1 [CP002039]
2201428
2201503
+
Gly
GCC
[Ensembl]
¡û
>W1511592948
LBIU01000291
Betaproteobacteria
Candidatus Accumulibacter adiacens phosphatis [LBIU]
2626
2551
-
Gly
GCC
[ENA]
¡û
>W1511683791
LFLS01000044
Betaproteobacteria
Herbaspirillum autotrophicum IAM 14942 [LFLS]
2223
2148
-
Gly
GCC
[ENA]
¡û
>W1511683793
LFLS01000044
Betaproteobacteria
Herbaspirillum autotrophicum IAM 14942 [LFLS]
1938
1863
-
Gly
GCC
[ENA]
¡û
>W1511683812
LFLT01000002
Betaproteobacteria
Herbaspirillum chlorophenolicum CPW301 [LFLT]
98892
98967
+
Gly
GCC
[ENA]
¡û
>W1511683814
LFLT01000002
Betaproteobacteria
Herbaspirillum chlorophenolicum CPW301 [LFLT]
99215
99290
+
Gly
GCC
[ENA]
¡û
>W1511683815
LFLT01000002
Betaproteobacteria
Herbaspirillum chlorophenolicum CPW301 [LFLT]
99355
99430
+
Gly
GCC
[ENA]
¡û
>W1511683862
LFLU01000003
Betaproteobacteria
Herbaspirillum rhizosphaerae UMS-37 [LFLU]
69404
69479
+
Gly
GCC
[ENA]
¡û
>W1511683864
LFLU01000003
Betaproteobacteria
Herbaspirillum rhizosphaerae UMS-37 [LFLU]
69712
69787
+
Gly
GCC
[ENA]
¡û
>W11185875
CACR01001282
Betaproteobacteria
Thauera selenatis AX [CACR]
3803
3728
-
Gly
GCC
[ENA]
¡û
>C161060439
CP013737
Betaproteobacteria
Herbaspirillum rubrisubalbicans M1 [CP013737]
2119314
2119389
+
Gly
GCC
[Ensembl]
¡û
>C161060441
CP013737
Betaproteobacteria
Herbaspirillum rubrisubalbicans M1 [CP013737]
2119627
2119702
+
Gly
GCC
[Ensembl]
¡û
>C161060442
CP013737
Betaproteobacteria
Herbaspirillum rubrisubalbicans M1 [CP013737]
2119755
2119830
+
Gly
GCC
[Ensembl]
¡û
>C161060443
CP013737
Betaproteobacteria
Herbaspirillum rubrisubalbicans M1 [CP013737]
2119883
2119958
+
Gly
GCC
[Ensembl]
¡û
>W1610071822
BCUJ01000003
Betaproteobacteria
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ]
77110
77185
+
Gly
GCC
[ENA]
¡û
>W1610071824
BCUJ01000003
Betaproteobacteria
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ]
77423
77498
+
Gly
GCC
[ENA]
¡û
>W1610071825
BCUJ01000003
Betaproteobacteria
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ]
77551
77626
+
Gly
GCC
[ENA]
¡û
>W1610071826
BCUJ01000003
Betaproteobacteria
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ]
77679
77754
+
Gly
GCC
[ENA]
¡û
>W121061964
AJHH01000257
Betaproteobacteria
Herbaspirillum lusitanum P6-12 [AJHH]
8182
8257
+
Gly
GCC
[ENA]
¡û
>W121068689
AJVC01000003
Betaproteobacteria
Herbaspirillum sp. GW103 [AJVC]
694562
694637
+
Gly
GCC
[ENA]
¡û
>W121068691
AJVC01000003
Betaproteobacteria
Herbaspirillum sp. GW103 [AJVC]
694875
694950
+
Gly
GCC
[ENA]
¡û
>W121068692
AJVC01000003
Betaproteobacteria
Herbaspirillum sp. GW103 [AJVC]
695004
695079
+
Gly
GCC
[ENA]
¡û
>W121068693
AJVC01000003
Betaproteobacteria
Herbaspirillum sp. GW103 [AJVC]
695133
695208
+
Gly
GCC
[ENA]
¡û
>W121085162
AKJA01000051
Betaproteobacteria
Herbaspirillum sp. YR522 [AKJA]
40156
40231
+
Gly
GCC
[ENA]
¡û
>W121085164
AKJA01000051
Betaproteobacteria
Herbaspirillum sp. YR522 [AKJA]
40472
40547
+
Gly
GCC
[ENA]
¡û
>W121085165
AKJA01000051
Betaproteobacteria
Herbaspirillum sp. YR522 [AKJA]
40600
40675
+
Gly
GCC
[ENA]
¡û
>W121086390
AKJW01000083
Betaproteobacteria
Herbaspirillum sp. CF444 [AKJW]
209887
209812
-
Gly
GCC
[ENA]
¡û
>W121086392
AKJW01000083
Betaproteobacteria
Herbaspirillum sp. CF444 [AKJW]
209581
209506
-
Gly
GCC
[ENA]
¡û
>W1610506411
FLQX01000035
Betaproteobacteria
Candidatus Accumulibacter aalborgensis sp. S1 [FLQX]
200603
200528
-
Gly
GCC
[ENA]
¡û
>W1610506419
FLQX01000094
Betaproteobacteria
Candidatus Accumulibacter aalborgensis sp. S1 [FLQX]
66572
66497
-
Gly
GCC
[ENA]
¡û
>W1610506471
FLQY01000182
Betaproteobacteria
Candidatus Propionivibrio aalborgensis S1 [FLQY]
4025
4100
+
Gly
GCC
[ENA]
¡û
>W1610506473
FLQY01000182
Betaproteobacteria
Candidatus Propionivibrio aalborgensis S1 [FLQY]
4250
4325
+
Gly
GCC
[ENA]
¡û
>W1610617601
LGUD01000010
Betaproteobacteria
Rhodocyclaceae bacterium Paddy-1 [LGUD]
197851
197926
+
Gly
GCC
[ENA]
¡û
>W1610617603
LGUD01000010
Betaproteobacteria
Rhodocyclaceae bacterium Paddy-1 [LGUD]
198087
198162
+
Gly
GCC
[ENA]
¡û
>W1610617604
LGUD01000010
Betaproteobacteria
Rhodocyclaceae bacterium Paddy-1 [LGUD]
198233
198308
+
Gly
GCC
[ENA]
¡û
>W1610752925
LNDZ01000013
Betaproteobacteria
Betaproteobacteria bacterium Ga0074130 [LNDZ]
213432
213507
+
Gly
GCC
[ENA]
¡û
>W1610752927
LNDZ01000013
Betaproteobacteria
Betaproteobacteria bacterium Ga0074130 [LNDZ]
213666
213741
+
Gly
GCC
[ENA]
¡û
>W1610783316
LODL01000009
Betaproteobacteria
Dechloromonas denitrificans [LODL]
308
233
-
Gly
GCC
[ENA]
¡û
>W1610783325
LODL01000019
Betaproteobacteria
Dechloromonas denitrificans [LODL]
105515
105590
+
Gly
GCC
[ENA]
¡û
>WENV079732
AATN01000080
Wastewater EBPR microbial communities from Bioreactor (Australian sludge)
21929
21854
-
Gly
GCC
[ENA]
>WENV079742
AATN01000120
Wastewater EBPR microbial communities from Bioreactor (Australian sludge)
19234
19309
+
Gly
GCC
[ENA]
>WENV079899
AATN01007384
Wastewater EBPR microbial communities from Bioreactor (Australian sludge)
578
503
-
Gly
GCC
[ENA]
>WENV079959
AATO01000014
Wastewater EBPR microbial communities from Bioreactor (USA sludge)
57090
57015
-
Gly
GCC
[ENA]
>WENV079975
AATO01000096
Wastewater EBPR microbial communities from Bioreactor (USA sludge)
8779
8854
+
Gly
GCC
[ENA]
>WENV079991
AATO01000214
Wastewater EBPR microbial communities from Bioreactor (USA sludge)
2424
2499
+
Gly
GCC
[ENA]
>WENV080009
AATO01000562
Wastewater EBPR microbial communities from Bioreactor (USA sludge)
1614
1539
-
Gly
GCC
[ENA]
>WENV080109
AATO01005751
Wastewater EBPR microbial communities from Bioreactor (USA sludge)
89
164
+
Gly
GCC
[ENA]
>WENV080194
AATO01011671
Wastewater EBPR microbial communities from Bioreactor (USA sludge)
397
322
-
Gly
GCC
[ENA]
>W1710069024
BCUJ01000003
Betaproteobacteria
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ]
77110
77185
+
Gly
GCC
[ENA]
¡û
>W1710069026
BCUJ01000003
Betaproteobacteria
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ]
77423
77498
+
Gly
GCC
[ENA]
¡û
>W1710069027
BCUJ01000003
Betaproteobacteria
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ]
77551
77626
+
Gly
GCC
[ENA]
¡û
>W1710069028
BCUJ01000003
Betaproteobacteria
Herbaspirillum rubrisubalbicans NBRC 102523 [BCUJ]
77679
77754
+
Gly
GCC
[ENA]
¡û
>W1710498914
FLQX01000035
Betaproteobacteria
Candidatus Accumulibacter aalborgensis sp. S1 [FLQX]
200603
200528
-
Gly
GCC
[ENA]
¡û
>W1710498922
FLQX01000094
Betaproteobacteria
Candidatus Accumulibacter aalborgensis sp. S1 [FLQX]
66572
66497
-
Gly
GCC
[ENA]
¡û
>W1710498974
FLQY01000182
Betaproteobacteria
Candidatus Propionivibrio aalborgensis S1 [FLQY]
4025
4100
+
Gly
GCC
[ENA]
¡û
>W1710498976
FLQY01000182
Betaproteobacteria
Candidatus Propionivibrio aalborgensis S1 [FLQY]
4250
4325
+
Gly
GCC
[ENA]
¡û
>W1710743151
LGUD01000010
Betaproteobacteria
Rhodocyclaceae bacterium Paddy-1 [LGUD]
197851
197926
+
Gly
GCC
[ENA]
¡û
>W1710743153
LGUD01000010
Betaproteobacteria
Rhodocyclaceae bacterium Paddy-1 [LGUD]
198087
198162
+
Gly
GCC
[ENA]
¡û
>W1710743154
LGUD01000010
Betaproteobacteria
Rhodocyclaceae bacterium Paddy-1 [LGUD]
198233
198308
+
Gly
GCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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