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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.249054 (8 seq.)
>WENV180002364
FLNY01001589
[FLNY] bioreactor metagenome; Moose rumen
771
694
-
Asp
GTC
[ENA]
¢þ
>WENV180680177
OCVV012473011
[OCVV] gut metagenome; gut
283
206
-
Asp
GTC
[ENA]
¢þ
>WENV180680178
OCVV012473011
[OCVV] gut metagenome; gut
283
206
-
Asp
GTC
[ENA]
¢þ
>WENV180680221
OCVV012483990
[OCVV] gut metagenome; gut
285
208
-
Asp
GTC
[ENA]
¢þ
>WENV180680222
OCVV012483990
[OCVV] gut metagenome; gut
285
208
-
Asp
GTC
[ENA]
¢þ
>WENV180681515
OCVV012777240
[OCVV] gut metagenome; gut
83
6
-
Asp
GTC
[ENA]
¢þ
>WENV180681516
OCVV012777240
[OCVV] gut metagenome; gut
83
6
-
Asp
GTC
[ENA]
¢þ
>WENV170776728
LXOW01203677
[LXOW] bovine gut metagenome; Cow rumen
115
38
-
Asp
GTC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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