This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.250593 (9 seq.)
>W1711298047
MAFA01000031
Actinomycetota
Mycobacteroides chelonae [MAFA]
67877
67952
+
Leu
TAG
[ENA]
¡û
>W1711298311
MAFF01000012
Actinomycetota
Mycobacteroides chelonae [MAFF]
209996
210071
+
Leu
TAG
[ENA]
¡û
>W1711298379
MAFG01000014
Actinomycetota
Mycobacteroides chelonae [MAFG]
210336
210411
+
Leu
TAG
[ENA]
¡û
>W1711298419
MAFH01000018
Actinomycetota
Mycobacteroides chelonae [MAFH]
140307
140232
-
Leu
TAG
[ENA]
¡û
>W1711298572
MAFK01000018
Actinomycetota
Mycobacteroides chelonae [MAFK]
140307
140232
-
Leu
TAG
[ENA]
¡û
>W1910322377
FSEY01000002
Actinomycetota
Mycobacteroides abscessus subsp. abscessus 963 [FSEY]
183125
183200
+
Leu
TAG
[ENA]
¡û
>W1910412492
FVHH01000002
Actinomycetota
Mycobacteroides abscessus subsp. abscessus 917 [FVHH]
495398
495323
-
Leu
TAG
[ENA]
¡û
>W1910413330
FVHW01000001
Actinomycetota
Mycobacteroides abscessus subsp. abscessus 935 [FVHW]
183163
183238
+
Leu
TAG
[ENA]
¡û
>W1910438579
FWCO01000001
Actinomycetota
Mycobacteroides abscessus subsp. abscessus 907 [FWCO]
562817
562892
+
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK