tRNA genes clustered and arranged according to each identical group

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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.251517 (76 seq.)
>W1710807297 LKCX01000001 Betaproteobacteria Curvibacter sp. PAE-UM [LKCX] 77860 77785 - Thr TGT [ENA] ¡û
>W131104524 APCR01000192 Betaproteobacteria Comamonas sp. B-9 [APCR] 911 986 + Thr TGT [ENA] ¡û
>W1711076423 LSLI01000003 Betaproteobacteria Candidatus Gallionella acididurans [LSLI] 35112 35187 + Thr TGT [ENA] ¡û
>W1711394975 MESP01000045 Betaproteobacteria Burkholderiales bacterium RIFOXYC2_FULL_59_8 [MESP] 276 201 - Thr TGT [ENA] ¡û
>W1711395016 MESQ01000055 Betaproteobacteria Burkholderiales bacterium RIFOXYD12_FULL_59_19 [MESQ] 129392 129317 - Thr TGT [ENA] ¡û
>W1711395031 MESR01000177 Betaproteobacteria Burkholderiales bacterium RIFOXYD2_FULL_59_8 [MESR] 4463 4538 + Thr TGT [ENA] ¡û
>W1711413665 MGWQ01000155 Betaproteobacteria Gallionellales bacterium GWA2_59_43 [MGWQ] 9458 9383 - Thr TGT [ENA] ¡û
>W1711413775 MGWU01000243 Betaproteobacteria Gallionellales bacterium RBG_16_56_9 [MGWU] 3877 3802 - Thr TGT [ENA] ¡û
>W1711413812 MGXD01000180 Betaproteobacteria Gallionellales bacterium RIFOXYB12_FULL_54_9 [MGXD] 821 746 - Thr TGT [ENA] ¡û
>W1711581701 MNUL01000092 Betaproteobacteria Comamonadaceae bacterium CG1_02_60_18 [MNUL] 36173 36248 + Thr TGT [ENA] ¡û
>W1711583959 MNXW01000194 Betaproteobacteria Comamonadaceae bacterium CG2_30_57_122 [MNXW] 10728 10803 + Thr TGT [ENA] ¡û
>W1711584032 MNXY01000183 Betaproteobacteria Comamonadaceae bacterium CG2_30_60_41 [MNXY] 11775 11850 + Thr TGT [ENA] ¡û
>W1711709041 MSYM01000001 Betaproteobacteria Rhodoferax antarcticus ANT.BR [MSYM] 161301 161226 - Thr TGT [ENA] ¡û
>W1711721731 MTJN01000002 Betaproteobacteria Rhodoferax fermentans [MTJN] 1250599 1250524 - Thr TGT [ENA] ¡û
>W1711751409 MUNS01000039 Betaproteobacteria Polaromonas sp. C04 [MUNS] 17545 17470 - Thr TGT [ENA] ¡û
>C171091627 CP019236 Betaproteobacteria Rhodoferax koreense DCY-110 [CP019236] 1447122 1447197 + Thr TGT - ¡û
>C171091736 CP019240 Betaproteobacteria Rhodoferax antarcticus DSM 24876 [CP019240] 3101157 3101082 - Thr TGT - ¡û
>C171118118 CP021361 Betaproteobacteria Acidovorax carolinensis NA3 [CP021361] 3396368 3396293 - Thr TGT - ¡û
>C171118142 CP021362 Betaproteobacteria Acidovorax carolinensis P3 [CP021362] 734254 734329 + Thr TGT - ¡û
>C171118220 CP021366 Betaproteobacteria Acidovorax carolinensis P4 [CP021366] 3347002 3346927 - Thr TGT - ¡û
>W131227139 AUEX01000035 Betaproteobacteria Acidovorax sp. JHL-9 [AUEX] 25928 25853 - Thr TGT [ENA] ¡û
>C018609 CP000267 Betaproteobacteria Rhodoferax ferrireducens T118 DSM 15236 [CP000267] 3275036 3275111 + Thr TGT [Ensembl] ¡û
>WENV180022095 FTFO01000317 [FTFO] metagenome; soil 8146 8071 - Thr TGT [ENA] ¢þ
>WENV180038462 FZPW01000017 [FZPW] metagenome; underground water 1 76 + Thr TGT [ENA] ¢þ
>WENV180038473 FZPW01000056 [FZPW] metagenome; underground water 4193 4268 + Thr TGT [ENA] ¢þ
>WENV180038574 FZPZ01000158 [FZPZ] metagenome; underground water 20941 21016 + Thr TGT [ENA] ¢þ
>w008234 AAJK01000023 Betaproteobacteria Rhodoferax ferrireducens DSM 15236 [AAJK] 13874 13951 + Thr TGT [ENA] ¡û
>WENV180260173 OBEQ011176525 [OBEQ] groundwater metagenome; groundwater 1270 1195 - Thr TGT [ENA] ¢þ
>WENV180283531 OBID01000509 [OBID] metagenome; sludge 12728 12653 - Thr TGT [ENA] ¢þ
>WENV180285959 OBID01856359 [OBID] metagenome; sludge 129 54 - Thr TGT [ENA] ¢þ
>WENV181170739 OEIV010081655 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 622 697 + Thr TGT [ENA] ¢þ
>WENV181364919 OFPG01000009 [OFPG] sediment metagenome; Lake sediment 23467 23392 - Thr TGT [ENA] ¢þ
>WENV181365231 OFPM01000520 [OFPM] sediment metagenome; Lake sediment 888 963 + Thr TGT [ENA] ¢þ
>WENV181365437 OFPR01000068 [OFPR] sediment metagenome; Lake sediment 1050 975 - Thr TGT [ENA] ¢þ
>WENV181369522 OFQP01006189 [OFQP] freshwater metagenome; Freshwater Lake 254 179 - Thr TGT [ENA] ¢þ
>WENV181370103 OFQR01017473 [OFQR] freshwater metagenome; Freshwater Lake 497 422 - Thr TGT [ENA] ¢þ
>WENV181370649 OFQT01001740 [OFQT] freshwater metagenome; Freshwater Lake 1747 1672 - Thr TGT [ENA] ¢þ
>WENV181379374 OFRD01000851 [OFRD] wastewater metagenome; Exp Tend CN 100WW 4632 4707 + Thr TGT [ENA] ¢þ
>WENV181380093 OFRD01030068 [OFRD] wastewater metagenome; Exp Tend CN 100WW 823 898 + Thr TGT [ENA] ¢þ
>WENV181385351 OFRI01071320 [OFRI] wastewater metagenome; Exp Tend VB 90WW 481 556 + Thr TGT [ENA] ¢þ
>WENV181400695 OFSF01018798 [OFSF] wastewater metagenome; Exp Tend VB 100WW 481 556 + Thr TGT [ENA] ¢þ
>W141278753 JAFU01000001 Betaproteobacteria Acidovorax sp. JHL-3 [JAFU] 1544155 1544230 + Thr TGT [ENA] ¡û
>WENV183661416 ORJL010106962 [ORJL] groundwater metagenome; groundwater 392 317 - Thr TGT [ENA] ¢þ
>WENV170011524 APMI01072165 [APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater 1199 1124 - Thr TGT [ENA] ¢þ
>WENV170555871 CXWL01002742 [CXWL] groundwater metagenome; biofilm material 12240 12165 - Thr TGT [ENA] ¢þ
>WENV170639606 JFJP01005311 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 27485 27560 + Thr TGT [ENA] ¢þ
>WENV170639637 JFJP01005515 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 13014 13089 + Thr TGT [ENA] ¢þ
>WENV170639676 JFJP01005847 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 5810 5735 - Thr TGT [ENA] ¢þ
>WENV170639703 JFJP01005996 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 4728 4803 + Thr TGT [ENA] ¢þ
>WENV170639713 JFJP01006148 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 78 3 - Thr TGT [ENA] ¢þ
>WENV170639759 JFJP01007121 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 607 532 - Thr TGT [ENA] ¢þ
>WENV170639836 JFJP01009467 [JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink 3172 3247 + Thr TGT [ENA] ¢þ
>WENV170706809 LNAP01007064 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 5535 5610 + Thr TGT [ENA] ¢þ
>WENV170706948 LNAP01009531 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 4906 4981 + Thr TGT [ENA] ¢þ
>WENV170708035 LNAP01045339 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 1277 1352 + Thr TGT [ENA] ¢þ
>WENV170961879 MLJW01004322 [MLJW] mine drainage metagenome; sample collected from the inflow into an acid mine drainage treatment plant; enriched for 143 218 + Thr TGT [ENA] ¢þ
>W09133904 ACQT01000019 Betaproteobacteria Acidovorax delafieldii 2AN [ACQT] 32249 32174 - Thr TGT [ENA] ¡û
>W141561756 JHYS01000006 Betaproteobacteria Simplicispira psychrophila DSM 11588 [JHYS] 28448 28523 + Thr TGT [ENA] ¡û
>W1910700251 MESI01000102 Betaproteobacteria Burkholderiales bacterium RIFCSPLOWO2_12_FULL_61_40 [MESI] 81512 81587 + Thr TGT [ENA] ¡û
>W1910744102 MHZY01000082 Betaproteobacteria Rhodoferax sp. RIFCSPLOWO2_12_FULL_60_11 [MHZY] 586 661 + Thr TGT [ENA] ¡û
>SRA1002169 SRR001308.282555 Metagenomic characterization of a wastewater treatment plant (SRP000180) 159 234 + Thr TGT [SRA]
>SRA1002244 SRR001308.325557 Metagenomic characterization of a wastewater treatment plant (SRP000180) 7 82 + Thr TGT [SRA]
>SRA1002806 SRR002326.30734 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 134 59 - Thr TGT [SRA]
>SRA1003348 SRR002326.405318 The Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240) 120 195 + Thr TGT [SRA]
>W1810570298 QEII01000236 Betaproteobacteria Rhodoferax ferrireducens OTU1 [QEII] 117040 117115 + Thr TGT [ENA] ¡û
>W1810577608 QEOJ01000003 Betaproteobacteria Rhodoferax sp. YR267 [QEOJ] 227489 227564 + Thr TGT [ENA] ¡û
>W1810580640 QETI01000013 Betaproteobacteria Comamonas sp. JNW [QETI] 115725 115650 - Thr TGT [ENA] ¡û
>W1810677465 QKMS01000012 Betaproteobacteria Acidovorax sp. OV235 [QKMS] 97801 97876 + Thr TGT [ENA] ¡û
>W1810696136 QLTA01000012 Betaproteobacteria Paracidovorax anthurii CFPB 3232 [QLTA] 62425 62350 - Thr TGT [ENA] ¡û
>W1810697067 QLTU01000002 Betaproteobacteria Acidovorax defluvii DSM 12644 [QLTU] 87240 87165 - Thr TGT [ENA] ¡û
>W1810750675 QOZT01000005 Betaproteobacteria Acidovorax sp. BoFeN1 [QOZT] 7508 7433 - Thr TGT [ENA] ¡û
>W1510766061 JANU01000003 Betaproteobacteria Caenimonas sp. SL110 [JANU] 127957 127882 - Thr TGT [ENA] ¡û
>W1610671401 LKCX01000001 Betaproteobacteria Curvibacter sp. PAE-UM [LKCX] 77860 77785 - Thr TGT [ENA] ¡û
>W1610915728 LSLI01000003 Betaproteobacteria Candidatus Gallionella acididurans [LSLI] 35112 35187 + Thr TGT [ENA] ¡û
>W1710524816 FNJA01000003 Betaproteobacteria Rhodoferax sp. OV413 OV413 [FNJA] 344046 343971 - Thr TGT [ENA] ¡û
>W1710532530 FNQJ01000027 Betaproteobacteria Acidovorax soli [FNQJ] 717 642 - Thr TGT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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