tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.253695 (79 seq.)
>W1712110528 NJIH01000006 Betaproteobacteria Candidimonas nitroreducens [NJIH] 389251 389326 + Lys TTT [ENA] ¡û
>C171008838 CP011189 Betaproteobacteria Bordetella pertussis H729 [CP011189] 2967756 2967831 + Lys TTT - ¡û
>C171009137 CP011195 Betaproteobacteria Bordetella pertussis H806 [CP011195] 2962806 2962881 + Lys TTT - ¡û
>C171010260 CP011242 Betaproteobacteria Bordetella pertussis I975 [CP011242] 1111803 1111728 - Lys TTT - ¡û
>C171011388 CP011695 Betaproteobacteria Bordetella pertussis H437 [CP011695] 1090933 1090858 - Lys TTT - ¡û
>C171012089 CP011709 Betaproteobacteria Bordetella pertussis H864 [CP011709] 1110754 1110679 - Lys TTT - ¡û
>C171012866 CP011725 Betaproteobacteria Bordetella pertussis I263 [CP011725] 3051654 3051729 + Lys TTT - ¡û
>C171013338 CP011734 Betaproteobacteria Bordetella pertussis I375 [CP011734] 1093029 1092954 - Lys TTT - ¡û
>C171013538 CP011738 Betaproteobacteria Bordetella pertussis I386 [CP011738] 1089897 1089822 - Lys TTT - ¡û
>C171015590 CP012081 Betaproteobacteria Bordetella pertussis I351 [CP012081] 2965925 2966000 + Lys TTT - ¡û
>C171015788 CP012085 Betaproteobacteria Bordetella pertussis J010 [CP012085] 2968754 2968829 + Lys TTT - ¡û
>C171020697 CP013093 Betaproteobacteria Bordetella pertussis J194 [CP013093] 2966706 2966781 + Lys TTT - ¡û
>C171028423 CP013884 Betaproteobacteria Bordetella pertussis J093 [CP013884] 1089881 1089806 - Lys TTT - ¡û
>C171029152 CP013899 Betaproteobacteria Bordetella pertussis J162 [CP013899] 2963555 2963630 + Lys TTT - ¡û
>C171119378 CP021455 Betaproteobacteria Comamonas serinivorans DSM 26136 [CP021455] 2195910 2195835 - Lys TTT - ¡û
>WENV181307942 OFIS01000051 [OFIS] sludge metagenome; sludge 111185 111110 - Lys TTT [ENA] ¢þ
>WENV181311753 OFJB01010852 [OFJB] sludge metagenome; sludge 1707 1632 - Lys TTT [ENA] ¢þ
>WENV181401557 OFTX01000920 [OFTX] sludge metagenome; sludge 8252 8177 - Lys TTT [ENA] ¢þ
>WENV181402542 OFTY01003724 [OFTY] sludge metagenome; sludge 2254 2179 - Lys TTT [ENA] ¢þ
>W141164664 AXSD02000107 Betaproteobacteria Bordetella pertussis CHLA-15 [AXSD] 5931 5856 - Lys TTT [ENA] ¡û
>W141164732 AXSF02000021 Betaproteobacteria Bordetella pertussis STO1-CHLA-0006 [AXSF] 23757 23682 - Lys TTT [ENA] ¡û
>W141165449 AXSU02000190 Betaproteobacteria Bordetella pertussis 2250905 [AXSU] 8547 8622 + Lys TTT [ENA] ¡û
>WENV183729602 PJTQ01087070 [PJTQ] soil metagenome; Soil (3) enriched on wood chips 105 180 + Lys TTT [ENA] ¢þ
>WENV183740274 PJUF01000946 [PJUF] feces metagenome; Chicken feces (3) enriched on wood chips 16275 16200 - Lys TTT [ENA] ¢þ
>WENV170688289 LFRM01237987 [LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle 193 268 + Lys TTT [ENA] ¢þ
>WENV170707238 LNAP01015834 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 8728 8653 - Lys TTT [ENA] ¢þ
>WENV170707365 LNAP01018726 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 3666 3591 - Lys TTT [ENA] ¢þ
>WENV170708078 LNAP01048597 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 19 94 + Lys TTT [ENA] ¢þ
>C191023141 CP022987 Betaproteobacteria Pollutimonas thiosulfatoxidans YE3 [CP022987] 2006094 2006019 - Lys TTT - ¡û
>C191029541 CP025068 Betaproteobacteria Bordetella parapertussis B144 [CP025068] 4023176 4023101 - Lys TTT - ¡û
>C191032798 CP025356 Betaproteobacteria Bordetella pertussis H034 [CP025356] 3051660 3051735 + Lys TTT - ¡û
>C191032870 CP025357 Betaproteobacteria Bordetella pertussis F578 [CP025357] 1079451 1079376 - Lys TTT - ¡û
>C191033751 CP025375 Betaproteobacteria Bordetella pertussis I439 [CP025375] 2966700 2966775 + Lys TTT - ¡û
>C191036084 CP025525 Betaproteobacteria Bordetella pertussis I420 [CP025525] 2969847 2969922 + Lys TTT - ¡û
>C191042425 CP026431 Betaproteobacteria Bordetella pertussis J363 [CP026431] 2971353 2971428 + Lys TTT - ¡û
>C191042598 CP026434 Betaproteobacteria Bordetella pertussis J357 [CP026434] 1028999 1028924 - Lys TTT - ¡û
>C191042873 CP026440 Betaproteobacteria Bordetella pertussis J323 [CP026440] 2967750 2967825 + Lys TTT - ¡û
>C191044247 CP026467 Betaproteobacteria Bordetella pertussis J401 [CP026467] 1090931 1090856 - Lys TTT - ¡û
>C191045620 CP026624 Betaproteobacteria Bordetella pertussis J525 [CP026624] 2966618 2966693 + Lys TTT - ¡û
>W141520961 JGWF01000152 Betaproteobacteria Bordetella pertussis H934 [JGWF] 1165 1090 - Lys TTT [ENA] ¡û
>C191045945 CP026630 Betaproteobacteria Bordetella pertussis J378 [CP026630] 1086147 1086072 - Lys TTT - ¡û
>C191047200 CP026888 Betaproteobacteria Bordetella pertussis J695 [CP026888] 2964621 2964696 + Lys TTT - ¡û
>C191047519 CP026894 Betaproteobacteria Bordetella pertussis J683 [CP026894] 1091981 1091906 - Lys TTT - ¡û
>C191047797 CP026900 Betaproteobacteria Bordetella pertussis J656 [CP026900] 2964897 2964972 + Lys TTT - ¡û
>W141521246 JGWL01000036 Betaproteobacteria Bordetella bronchiseptica 7.00E+71 [JGWL] 51803 51878 + Lys TTT [ENA] ¡û
>W141521428 JGWO01000179 Betaproteobacteria Bordetella bronchiseptica A1-7 [JGWO] 200151 200076 - Lys TTT [ENA] ¡û
>W141522110 JGXC01000093 Betaproteobacteria Bordetella bronchiseptica F4563 [JGXC] 46292 46367 + Lys TTT [ENA] ¡û
>W141522786 JGXQ01000051 Betaproteobacteria Bordetella bronchiseptica MBORD698 [JGXQ] 226252 226177 - Lys TTT [ENA] ¡û
>W141523175 JGXY01000052 Betaproteobacteria Bordetella bronchiseptica OSU095 [JGXY] 51480 51555 + Lys TTT [ENA] ¡û
>C191207007 LR134329 Betaproteobacteria Bordetella parapertussis NCTC10524 [LR134329] 310177 310102 - Lys TTT - ¡û
>W141552063 JHOJ01000042 Betaproteobacteria Bordetella bronchiseptica MO211 [JHOJ] 51235 51310 + Lys TTT [ENA] ¡û
>W141729832 JNHR01000035 Betaproteobacteria Bordetella bronchiseptica KM22 [JNHR] 104799 104724 - Lys TTT [ENA] ¡û
>W1911200369 NRER01000002 Betaproteobacteria Bordetella bronchiseptica SH03 [NRER] 259722 259647 - Lys TTT [ENA] ¡û
>W1911238579 NSCW01000494 Betaproteobacteria Bordetella pertussis VBD1 [NSCW] 1837 1912 + Lys TTT [ENA] ¡û
>W1810062082 PDNV01000002 Betaproteobacteria Pollutimonas nitritireducens JR1/69-2-13 [PDNV] 403268 403193 - Lys TTT [ENA] ¡û
>W1810062143 PDNW01000016 Betaproteobacteria Pollutimonas subterranea JR1/69-3-13 [PDNW] 53516 53441 - Lys TTT [ENA] ¡û
>W1810089043 PGEK01000026 Betaproteobacteria Castellaniella caeni CD04 [PGEK] 21573 21498 - Lys TTT [ENA] ¡û
>C151101346 HG916765 Betaproteobacteria Castellaniella defragrans 65Phen [HG916765] 3605733 3605658 - Lys TTT [Ensembl] ¡û
>C151105031 LN849008 Betaproteobacteria Bordetella pertussis D420 [LN849008] 1425816 1425741 - Lys TTT [Ensembl] ¡û
>W1510536832 CSMW01000532 Betaproteobacteria Bordetella pertussis B051 [CSMW] 370 295 - Lys TTT [ENA] ¡û
>W1510536979 CSMZ01000231 Betaproteobacteria Bordetella pertussis B062 [CSMZ] 358 283 - Lys TTT [ENA] ¡û
>W1510537321 CSNG01000540 Betaproteobacteria Bordetella pertussis B153 [CSNG] 1853 1928 + Lys TTT [ENA] ¡û
>W1510538666 CSOI01000502 Betaproteobacteria Bordetella pertussis B117 [CSOI] 1739 1814 + Lys TTT [ENA] ¡û
>W1510538789 CSOL01000209 Betaproteobacteria Bordetella pertussis B310 [CSOL] 6230 6305 + Lys TTT [ENA] ¡û
>W1510540983 CSQE01000214 Betaproteobacteria Bordetella pertussis B339 [CSQE] 5533 5608 + Lys TTT [ENA] ¡û
>W1510543086 CSRW01000483 Betaproteobacteria Bordetella pertussis B330 [CSRW] 341 266 - Lys TTT [ENA] ¡û
>W1510543891 CSSN01000222 Betaproteobacteria Bordetella pertussis B102 [CSSN] 5643 5718 + Lys TTT [ENA] ¡û
>C11118182 CP002663 Betaproteobacteria Pusillimonas sp. T7-7 [CP002663] 36875 36950 + Lys TTT [Ensembl] ¡û
>W11119327 ADKU01000091 Betaproteobacteria Bordetella pertussis B1834 [ADKU] 304 229 - Lys TTT [ENA] ¡û
>W11119391 ADKV01000580 Betaproteobacteria Bordetella pertussis B1917 [ADKV] 300 225 - Lys TTT [ENA] ¡û
>C161024232 CP010263 Betaproteobacteria Bordetella pertussis I646 [CP010263] 2965670 2965745 + Lys TTT - ¡û
>C161024355 CP010265 Betaproteobacteria Bordetella pertussis I669 [CP010265] 1090049 1089974 - Lys TTT - ¡û
>C161028950 CP010840 Betaproteobacteria Bordetella pertussis H379 [CP010840] 1090929 1090854 - Lys TTT - ¡û
>C161035792 CP011447 Betaproteobacteria Bordetella pertussis B3913 [CP011447] 2967775 2967850 + Lys TTT - ¡û
>C161096210 CP016338 Betaproteobacteria Bordetella pertussis B202 [CP016338] 2989273 2989348 + Lys TTT - ¡û
>W1610074266 BCWN01000016 Betaproteobacteria Castellaniella caeni NBRC 101664 [BCWN] 21485 21410 - Lys TTT [ENA] ¡û
>C131020065 HE965806 Betaproteobacteria Bordetella bronchiseptica 253 [HE965806] 4571714 4571789 + Lys TTT [Ensembl] ¡û
>W1710071384 BCWN01000016 Betaproteobacteria Castellaniella caeni NBRC 101664 [BCWN] 21485 21410 - Lys TTT [ENA] ¡û
>W1710586406 FQXE01000006 Betaproteobacteria Pollutimonas bauzanensis [FQXE] 13188 13263 + Lys TTT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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