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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.253733 (60 seq.)
>W1710809601
LKEQ01000008
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
44205
44132
-
Lys
TTT
[ENA]
¡û
>W1711055064
LRUH01000054
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
1156
1229
+
Lys
TTT
[ENA]
¡û
>W1711088432
LSYX01000054
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYX]
349
424
+
Lys
TTT
[ENA]
¡û
>W1711088480
LSYY01000120
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
6098
6171
+
Lys
TTT
[ENA]
¡û
>W1711088488
LSYY01000136
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
1095
1168
+
Lys
TTT
[ENA]
¡û
>W1711745711
MUJL01000093
Alphaproteobacteria
Wolbachia pipientis wUni [MUJL]
2645
2718
+
Lys
TTT
[ENA]
¡û
>W1711745741
MUJM01000072
Alphaproteobacteria
Wolbachia pipientis wVitA [MUJM]
15608
15681
+
Lys
TTT
[ENA]
¡û
>W1712108432
NJBR01000034
Alphaproteobacteria
Wolbachia endosymbiont of Wuchereria bancrofti [NJBR]
283
358
+
Lys
TTT
[ENA]
¡û
>W131052826
AMZJ01000065
Alphaproteobacteria
Wolbachia endosymbiont of Diaphorina citri [AMZJ]
18155
18082
-
Lys
TTT
[ENA]
¡û
>W131242648
CAOH01000082
Alphaproteobacteria
Wolbachia pipientis wBol1-b [CAOH]
78553
78480
-
Lys
TTT
[ENA]
¡û
>W131243115
CAOU02000032
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila suzukii str. valsugana of Drosophila suzukii [CAOU]
12839
12912
+
Lys
TTT
[ENA]
¡û
>C026832
AE017196
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila melanogaster wMel [AE017196]
935327
935399
+
Lys
TTT
[Ensembl]
¡û
>C026881
AE017321
Alphaproteobacteria
Wolbachia endosymbiont strain TRS of Brugia malayi [AE017321]
619779
619704
-
Lys
TTT
[Ensembl]
¡û
>w016793
AAQP01000023
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila willistoni of Drosophila willistoni TSC#14030-0811.24 [AAQP]
3517
3440
-
Lys
TTT
[ENA]
¡û
>w005424
AAGC01000096
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans [AAGC]
1619
1696
+
Lys
TTT
[ENA]
¡û
>W141065636
AQQE01000059
Alphaproteobacteria
Wolbachia pipientis wMelPop [AQQE]
26706
26779
+
Lys
TTT
[ENA]
¡û
>W141145089
AWUH01000125
Alphaproteobacteria
Wolbachia endosymbiont of Glossina morsitans morsitans [AWUH]
9893
9966
+
Lys
TTT
[ENA]
¡û
>W141240220
CAGB01000112
Alphaproteobacteria
Wolbachia pipientis wAlbB [CAGB]
1513
1586
+
Lys
TTT
[ENA]
¡û
>C08011405
AM999887
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus Pel wPip [AM999887]
1070893
1070966
+
Lys
TTT
[Ensembl]
¡û
>WENV170715496
LQAB01002549
[LQAB] termite gut metagenome; bacterial endosymbionts found in Trichonympha flagellates filtered from termite gut
121
196
+
Lys
TTT
[ENA]
¢þ
>C181017557
CP015510
Alphaproteobacteria
Wolbachia endosymbiont of Folsomia candida Berlin [CP015510]
1008974
1009047
+
Lys
TTT
-
¡û
>C191074329
CP031221
Alphaproteobacteria
Wolbachia pipientis wAlbB [CP031221]
1399763
1399836
+
Lys
TTT
-
¡û
>C191123108
CP034333
Alphaproteobacteria
Wolbachia endosymbiont of Brugia malayi [CP034333]
1032370
1032297
-
Lys
TTT
-
¡û
>C191123155
CP034334
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034334]
405443
405370
-
Lys
TTT
-
¡û
>C191123189
CP034335
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila mauritiana wMau [CP034335]
405446
405373
-
Lys
TTT
-
¡û
>C191188738
CP041215
Alphaproteobacteria
Wolbachia endosymbiont of Carposina sasakii [CP041215]
50841
50768
-
Lys
TTT
-
¡û
>W09113843
ABZA01000001
Alphaproteobacteria
Wolbachia endosymbiont of Culex quinquefasciatus of Culex quinquefasciatus JHB [ABZA]
294778
294851
+
Lys
TTT
[ENA]
¡û
>W09121816
ACFP01000204
Alphaproteobacteria
Wolbachia endosymbiont of Muscidifurax uniraptor [ACFP]
2798
2725
-
Lys
TTT
[ENA]
¡û
>W1910213470
FMKF01000093
Alphaproteobacteria
Wolbachia endosymbiont of Bemisia tabaci [FMKF]
3901
3828
-
Lys
TTT
[ENA]
¡û
>C09111262
CP001391
Alphaproteobacteria
Wolbachia sp. wRi [CP001391]
995213
995286
+
Lys
TTT
[Ensembl]
¡û
>W1910753958
MKIF01000063
Alphaproteobacteria
Wolbachia sp. wRi [MKIF]
13056
13129
+
Lys
TTT
[ENA]
¡û
>W1910759038
MLZJ01000142
Alphaproteobacteria
Wolbachia sp. wMel_KL [MLZJ]
15516
15589
+
Lys
TTT
[ENA]
¡û
>W1910760285
MNCG01000142
Alphaproteobacteria
Wolbachia sp. wMel_AMD [MNCG]
15516
15589
+
Lys
TTT
[ENA]
¡û
>W1910794369
MRWX01000045
Alphaproteobacteria
Wolbachia pipientis wAus [MRWX]
7452
7379
-
Lys
TTT
[ENA]
¡û
>W1911239448
NSDR01000032
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_India [NSDR]
13104
13177
+
Lys
TTT
[ENA]
¡û
>W1911239482
NSDS01000016
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Hawaii [NSDS]
13006
13079
+
Lys
TTT
[ENA]
¡û
>W1911239528
NSDT01000067
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila ananassae of Drosophila ananassae wAna_Indonesia [NSDT]
13104
13177
+
Lys
TTT
[ENA]
¡û
>W1911281115
NTHL01000067
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila subpulchrella of Drosophila subpulchrella wSpc [NTHL]
13927
14000
+
Lys
TTT
[ENA]
¡û
>W1911412138
NWVH01000008
Alphaproteobacteria
Wolbachia pipientis FL2016 [NWVH]
3360
3433
+
Lys
TTT
[ENA]
¡û
>W1911412176
NWVI01000004
Alphaproteobacteria
Wolbachia pipientis HN2016 [NWVI]
7407
7334
-
Lys
TTT
[ENA]
¡û
>W1911545131
OUNE01000230
Alphaproteobacteria
Wolbachia endosymbiont of Aleurodicus dispersus WBAD (OUNE) of Aleurodicus dispersus WBAD [OUNE]
2295
2368
+
Lys
TTT
[ENA]
¡û
>W1911545146
OUNF01000187
Alphaproteobacteria
Wolbachia endosymbiont of Aleurodicus floccissimus WBAF (OUNF) of Aleurodicus floccissimus WBAF [OUNF]
7366
7293
-
Lys
TTT
[ENA]
¡û
>W1810758337
QPIP01000013
Alphaproteobacteria
Wolbachia endosymbiont of Cylisticus convexus of Cylisticus convexus Wcon [QPIP]
29922
29995
+
Lys
TTT
[ENA]
¡û
>W1810758360
QPIP01000236
Alphaproteobacteria
Wolbachia endosymbiont of Cylisticus convexus of Cylisticus convexus Wcon [QPIP]
20165
20238
+
Lys
TTT
[ENA]
¡û
>C151001144
AP013028
Alphaproteobacteria
Wolbachia endosymbiont of Cimex lectularius wCle [AP013028]
670531
670456
-
Lys
TTT
[Ensembl]
¡û
>C151101095
HG810405
Alphaproteobacteria
Wolbachia endosymbiont of Onchocerca volvulus str. Cameroon [HG810405]
914600
914675
+
Lys
TTT
-
¡û
>C151102222
LK055284
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wAu [LK055284]
909810
909737
-
Lys
TTT
[Ensembl]
¡û
>W1510562588
CTEH01000001
Alphaproteobacteria
Wolbachia endosymbiont of Culex molestus wPip_Mol of Culex molestus [CTEH]
24524
24597
+
Lys
TTT
[ENA]
¡û
>W1511183965
JMCJ01000632
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus of Dactylopius coccus wCoc1 [JMCJ]
378
451
+
Lys
TTT
[ENA]
¡û
>W1511536228
JYPC01000098
Alphaproteobacteria
Wolbachia endosymbiont of Operophtera brumata of Operophtera brumata Ob_Wba [JYPC]
10138
10065
-
Lys
TTT
[ENA]
¡û
>W11145951
AERW01000245
Alphaproteobacteria
Wolbachia endosymbiont of Nasonia vitripennis wVitB of Nasonia vitripennis [AERW]
435
508
+
Lys
TTT
[ENA]
¡û
>W11185730
CACK01000093
Alphaproteobacteria
Wolbachia endosymbiont of Culex pipiens molestus [CACK]
7391
7318
-
Lys
TTT
[ENA]
¡û
>C131019572
HE660029
Alphaproteobacteria
Wolbachia endosymbiont of Onchocerca ochengi wOo [HE660029]
318598
318673
+
Lys
TTT
[Ensembl]
¡û
>C131009119
CP003883
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wNo [CP003883]
784674
784747
+
Lys
TTT
[Ensembl]
¡û
>C131009148
CP003884
Alphaproteobacteria
Wolbachia endosymbiont of Drosophila simulans wHa [CP003884]
967845
967918
+
Lys
TTT
[Ensembl]
¡û
>W1610673707
LKEQ01000008
Alphaproteobacteria
Wolbachia endosymbiont of Trichogramma pretiosum [LKEQ]
44205
44132
-
Lys
TTT
[ENA]
¡û
>W1610896110
LRUH01000054
Alphaproteobacteria
Wolbachia endosymbiont of Laodelphax striatellus of Laodelphax striatella [LRUH]
1156
1229
+
Lys
TTT
[ENA]
¡û
>W1610922971
LSYX01000054
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYX]
349
424
+
Lys
TTT
[ENA]
¡û
>W1610923019
LSYY01000120
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
6098
6171
+
Lys
TTT
[ENA]
¡û
>W1610923027
LSYY01000136
Alphaproteobacteria
Wolbachia endosymbiont of Dactylopius coccus [LSYY]
1095
1168
+
Lys
TTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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