This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.254901 (19 seq.)
>W1711352247
MDDB01000001
Bacillota
Moorella thermoacetica [MDDB]
130244
130319
+
Trp
CCA
[ENA]
¡û
>W1711352338
MDDC01000020
Bacillota
Moorella thermoacetica [MDDC]
27779
27704
-
Trp
CCA
[ENA]
¡û
>W1711352349
MDDD01000001
Bacillota
Moorella thermoacetica [MDDD]
129825
129900
+
Trp
CCA
[ENA]
¡û
>W1711352436
MDDE01000005
Bacillota
Moorella thermoacetica [MDDE]
35946
35871
-
Trp
CCA
[ENA]
¡û
>W1711428543
MIHH01000004
Bacillota
Moorella thermoacetica [MIHH]
192568
192493
-
Trp
CCA
[ENA]
¡û
>W1711428567
MIIF01000001
Bacillota
Moorella thermoacetica [MIIF]
164243
164318
+
Trp
CCA
[ENA]
¡û
>C171055189
CP017019
Bacillota
Moorella thermoacetica DSM 103132 [CP017019]
1343000
1343075
+
Trp
CCA
-
¡û
>C171058955
CP017237
Bacillota
Moorella thermoacetica DSM 103284 [CP017237]
1114562
1114637
+
Trp
CCA
-
¡û
>C014174
CP000232
Bacillota
Moorella thermoacetica [CP000232]
1172671
1172746
+
Trp
CCA
[Ensembl]
¡û
>W141229816
BARR01000042
Bacillota
Moorella thermoacetica Y72 [BARR]
142554
142629
+
Trp
CCA
[ENA]
¡û
>WENV170677831
LDZT01009515
[LDZT] terrestrial metagenome; oil reservoir sample SB1
2331
2256
-
Trp
CCA
[ENA]
¢þ
>W09100934
AADT03000019
Bacillota
Moorella thermoacetica ATCC 39073 [AADT]
27390
27465
+
Trp
CCA
[ENA]
¡û
>W09135906
BAAC01000067
Bacillota
Pelotomaculum thermopropionicum SI [BAAC]
28104
28029
-
Trp
CCA
[ENA]
¡û
>C191073431
CP031054
Bacillota
Moorella thermoacetica 39073-HH [CP031054]
1176911
1176986
+
Trp
CCA
-
¡û
>W1810010431
BFFN01000004
Bacillota
Moorella sp. Hama-1 [BFFN]
105310
105235
-
Trp
CCA
[ENA]
¡û
>W1810367299
PVXL01000055
Bacillota
Moorella stamsii DSM 26271 [PVXL]
84634
84559
-
Trp
CCA
[ENA]
¡û
>C151094359
CP012369
Bacillota
Moorella thermoacetica DSM 521 [CP012369]
1067398
1067473
+
Trp
CCA
-
¡û
>C151094410
CP012370
Bacillota
Moorella thermoacetica DSM 2955 [CP012370]
1166933
1167008
+
Trp
CCA
-
¡û
>W1510100292
CELZ01000061
Bacillota
Moorella glycerini NMP [CELZ]
79867
79792
-
Trp
CCA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK