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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.269595 (15 seq.)
>W1711400392
MFGS01000120
Unclassified
Candidatus Firestonebacteria bacterium RIFOXYA2_FULL_40_8 [MFGS]
7726
7652
-
Lys
CTT
[ENA]
¡û
>W1711400431
MFGU01000016
Unclassified
Candidatus Firestonebacteria bacterium RIFOXYC2_FULL_39_67 [MFGU]
14225
14151
-
Lys
CTT
[ENA]
¡û
>W1711400502
MFGV01000075
Unclassified
Candidatus Firestonebacteria bacterium RIFOXYD2_FULL_39_29 [MFGV]
14209
14135
-
Lys
CTT
[ENA]
¡û
>W2110083180
CAINUA010000243
Unclassified
Candidatus Firestonebacteria bacterium [CAINUA]
496
421
-
Lys
CTT
[ENA]
¡û
>W2110083392
CAINWK010000172
Unclassified
Candidatus Firestonebacteria bacterium [CAINWK]
509
434
-
Lys
CTT
[ENA]
¡û
>W2110084308
CAIOVX010000014
Unclassified
Candidatus Firestonebacteria bacterium [CAIOVX]
149
74
-
Lys
CTT
[ENA]
¡û
>W2110085491
CAIQXK010000153
Unclassified
Candidatus Firestonebacteria bacterium [CAIQXK]
538
463
-
Lys
CTT
[ENA]
¡û
>W2110086061
CAIRVI010000169
Unclassified
Candidatus Firestonebacteria bacterium [CAIRVI]
82
7
-
Lys
CTT
[ENA]
¡û
>W2110086073
CAIRWQ010000049
Unclassified
Candidatus Firestonebacteria bacterium [CAIRWQ]
22680
22755
+
Lys
CTT
[ENA]
¡û
>W2110088035
CAIULY010000003
Unclassified
Candidatus Firestonebacteria bacterium [CAIULY]
262
187
-
Lys
CTT
[ENA]
¡û
>W2110088413
CAIVIC010000190
Unclassified
Candidatus Firestonebacteria bacterium [CAIVIC]
466
391
-
Lys
CTT
[ENA]
¡û
>W2110088826
CAIWFV010000120
Unclassified
Candidatus Firestonebacteria bacterium [CAIWFV]
24975
25050
+
Lys
CTT
[ENA]
¡û
>W2110089248
CAIWWK010000078
Unclassified
Candidatus Firestonebacteria bacterium [CAIWWK]
376
301
-
Lys
CTT
[ENA]
¡û
>W2110089874
CAIXOH010000122
Unclassified
Candidatus Firestonebacteria bacterium [CAIXOH]
242
167
-
Lys
CTT
[ENA]
¡û
>W2110090453
CAIYJI010000333
Unclassified
Candidatus Firestonebacteria bacterium [CAIYJI]
25960
26035
+
Lys
CTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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