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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.270703 (252 seq.)
>W1710822182
LKUR01000016
Actinomycetota
Bifidobacterium bifidum [LKUR]
32344
32268
-
Pro
TGG
[ENA]
¡û
>W1711048309
LRPO01000016
Actinomycetota
Bifidobacterium bifidum [LRPO]
40337
40413
+
Pro
TGG
[ENA]
¡û
>W1711082559
LSUI01000029
Actinomycetota
Bifidobacterium bifidum [LSUI]
17002
16926
-
Pro
TGG
[ENA]
¡û
>W1711082642
LSUL01000001
Actinomycetota
Bifidobacterium bifidum [LSUL]
28886
28810
-
Pro
TGG
[ENA]
¡û
>W1711938034
NAQK01000007
Actinomycetota
Bifidobacterium bifidum [NAQK]
8772
8696
-
Pro
TGG
[ENA]
¡û
>W1711959084
NBYL01000001
Actinomycetota
Bifidobacterium bifidum [NBYL]
33043
32967
-
Pro
TGG
[ENA]
¡û
>W1712109192
NJFD01000002
Actinomycetota
Mobiluncus mulieris [NJFD]
2127389
2127465
+
Pro
TGG
[ENA]
¡û
>W131043434
AMPL01000006
Actinomycetota
Bifidobacterium bifidum LMG 13195 [AMPL]
18473
18549
+
Pro
TGG
[ENA]
¡û
>W131043502
AMPM01000161
Actinomycetota
Bifidobacterium bifidum IPLA 20015 [AMPM]
5767
5843
+
Pro
TGG
[ENA]
¡û
>W131215623
ATVE01000001
Actinomycetota
Bifidobacterium magnum DSM 20222 [ATVE]
319057
319133
+
Pro
TGG
[ENA]
¡û
>W131223984
AUCL01000006
Actinomycetota
Bifidobacterium tsurumiense DSM 17777 [AUCL]
15547
15473
-
Pro
TGG
[ENA]
¡û
>W131227658
AUFI01000008
Actinomycetota
Bifidobacterium thermacidophilum subsp. thermacidophilum DSM 15837 [AUFI]
29452
29528
+
Pro
TGG
[ENA]
¡û
>WENV180128611
OATB01000423
[OATB] human gut metagenome; faeces
7564
7639
+
Pro
TGG
[ENA]
¢þ
>WENV180136536
OATN01000061
[OATN] human gut metagenome; faeces
51878
51953
+
Pro
TGG
[ENA]
¢þ
>WENV180136943
OATO01000031
[OATO] human gut metagenome; faeces
149
73
-
Pro
TGG
[ENA]
¢þ
>WENV180141869
OATV01000091
[OATV] human gut metagenome; faeces
37250
37325
+
Pro
TGG
[ENA]
¢þ
>WENV180142585
OATW01001631
[OATW] human gut metagenome; faeces
133
208
+
Pro
TGG
[ENA]
¢þ
>WENV180147164
OAUG01001098
[OAUG] human gut metagenome; faeces
58
133
+
Pro
TGG
[ENA]
¢þ
>WENV180149225
OAUK01034354
[OAUK] human gut metagenome; faeces
144
219
+
Pro
TGG
[ENA]
¢þ
>WENV180151993
OAUP01002464
[OAUP] human gut metagenome; faeces
677
753
+
Pro
TGG
[ENA]
¢þ
>WENV180152996
OAUR01000145
[OAUR] human gut metagenome; faeces
18564
18489
-
Pro
TGG
[ENA]
¢þ
>WENV180157494
OAUX01000090
[OAUX] human gut metagenome; faeces
37220
37295
+
Pro
TGG
[ENA]
¢þ
>WENV180162834
OAVH01000195
[OAVH] human gut metagenome; faeces
16777
16853
+
Pro
TGG
[ENA]
¢þ
>WENV180163958
OAVI01011379
[OAVI] human gut metagenome; faeces
387
311
-
Pro
TGG
[ENA]
¢þ
>WENV180165138
OAVK01000099
[OAVK] human gut metagenome; faeces
37304
37379
+
Pro
TGG
[ENA]
¢þ
>WENV180165703
OAVL01000003
[OAVL] human gut metagenome; faeces
22881
22806
-
Pro
TGG
[ENA]
¢þ
>WENV180171251
OAVW01000058
[OAVW] human gut metagenome; faeces
7564
7639
+
Pro
TGG
[ENA]
¢þ
>WENV180172097
OAVX01000265
[OAVX] human gut metagenome; faeces
3969
3893
-
Pro
TGG
[ENA]
¢þ
>WENV180173023
OAVY01000679
[OAVY] human gut metagenome; faeces
3617
3542
-
Pro
TGG
[ENA]
¢þ
>WENV180173307
OAVZ01000575
[OAVZ] human gut metagenome; faeces
120
195
+
Pro
TGG
[ENA]
¢þ
>WENV180175900
OAWC01002878
[OAWC] human gut metagenome; faeces
122
197
+
Pro
TGG
[ENA]
¢þ
>WENV180176806
OAWD01001706
[OAWD] human gut metagenome; faeces
4017
4092
+
Pro
TGG
[ENA]
¢þ
>WENV180177283
OAWE01000195
[OAWE] human gut metagenome; faeces
20317
20242
-
Pro
TGG
[ENA]
¢þ
>WENV180183912
OAWR01000004
[OAWR] human gut metagenome; faeces
27822
27897
+
Pro
TGG
[ENA]
¢þ
>WENV180185767
OAWU01000132
[OAWU] human gut metagenome; faeces
37347
37422
+
Pro
TGG
[ENA]
¢þ
>WENV180189008
OAWX01003636
[OAWX] human gut metagenome; faeces
191
266
+
Pro
TGG
[ENA]
¢þ
>WENV180196066
OAZZ01026943
[OAZZ] human gut metagenome; faeces
110
35
-
Pro
TGG
[ENA]
¢þ
>WENV180289814
OBIU01000222
[OBIU] human gut metagenome; human gut
29229
29304
+
Pro
TGG
[ENA]
¢þ
>WENV180409356
OBUU01000664
[OBUU] human gut metagenome; faeces
1824
1899
+
Pro
TGG
[ENA]
¢þ
>WENV180412282
OBVA01000517
[OBVA] human gut metagenome; faeces
11711
11636
-
Pro
TGG
[ENA]
¢þ
>WENV180414611
OBVD01000130
[OBVD] human gut metagenome; faeces
33666
33591
-
Pro
TGG
[ENA]
¢þ
>WENV180418866
OBVL01000315
[OBVL] human gut metagenome; faeces
2732
2657
-
Pro
TGG
[ENA]
¢þ
>WENV180419341
OBVM01001441
[OBVM] human gut metagenome; faeces
1799
1724
-
Pro
TGG
[ENA]
¢þ
>WENV180420856
OBVP01000164
[OBVP] human gut metagenome; faeces
284
359
+
Pro
TGG
[ENA]
¢þ
>WENV180427944
OBWB01001237
[OBWB] human gut metagenome; faeces
7557
7632
+
Pro
TGG
[ENA]
¢þ
>WENV180437159
OBWO01000852
[OBWO] human gut metagenome; faeces
8992
8917
-
Pro
TGG
[ENA]
¢þ
>WENV180438566
OBWS01000112
[OBWS] human gut metagenome; faeces
37116
37191
+
Pro
TGG
[ENA]
¢þ
>WENV180441397
OBWW01000241
[OBWW] human gut metagenome; faeces
37244
37319
+
Pro
TGG
[ENA]
¢þ
>WENV180452708
OBXK01000157
[OBXK] human gut metagenome; faeces
8118
8043
-
Pro
TGG
[ENA]
¢þ
>WENV180455020
OBXO01000250
[OBXO] human gut metagenome; faeces
37327
37402
+
Pro
TGG
[ENA]
¢þ
>WENV180459387
OBXX01000155
[OBXX] human gut metagenome; faeces
37165
37240
+
Pro
TGG
[ENA]
¢þ
>WENV180462580
OBYB01009849
[OBYB] human gut metagenome; faeces
77
3
-
Pro
TGG
[ENA]
¢þ
>WENV180465125
OBYE01001811
[OBYE] human gut metagenome; faeces
764
689
-
Pro
TGG
[ENA]
¢þ
>WENV180466964
OBYG01029586
[OBYG] human gut metagenome; faeces
144
219
+
Pro
TGG
[ENA]
¢þ
>WENV180473536
OBYR01000384
[OBYR] human gut metagenome; faeces
20408
20483
+
Pro
TGG
[ENA]
¢þ
>WENV180475000
OBYU01000038
[OBYU] human gut metagenome; faeces
49203
49278
+
Pro
TGG
[ENA]
¢þ
>WENV180486480
OBZM01000253
[OBZM] human gut metagenome; faeces
455
530
+
Pro
TGG
[ENA]
¢þ
>WENV180489348
OBZS01000047
[OBZS] human gut metagenome; faeces
37321
37396
+
Pro
TGG
[ENA]
¢þ
>WENV180492060
OBZW01000215
[OBZW] human gut metagenome; faeces
37322
37397
+
Pro
TGG
[ENA]
¢þ
>WENV180492711
OBZX01000203
[OBZX] human gut metagenome; faeces
190
265
+
Pro
TGG
[ENA]
¢þ
>WENV180492989
OBZY01000058
[OBZY] human gut metagenome; faeces
22695
22620
-
Pro
TGG
[ENA]
¢þ
>WENV180493466
OBZZ01000023
[OBZZ] human gut metagenome; faeces
85581
85656
+
Pro
TGG
[ENA]
¢þ
>WENV180493672
OBZZ01000157
[OBZZ] human gut metagenome; faeces
39745
39820
+
Pro
TGG
[ENA]
¢þ
>WENV180495625
OCAB01000141
[OCAB] human gut metagenome; faeces
37415
37490
+
Pro
TGG
[ENA]
¢þ
>WENV180497961
OCAF01000193
[OCAF] human gut metagenome; faeces
725
801
+
Pro
TGG
[ENA]
¢þ
>WENV180498352
OCAG01000085
[OCAG] human gut metagenome; faeces
41894
41819
-
Pro
TGG
[ENA]
¢þ
>WENV180499369
OCAH01002079
[OCAH] human gut metagenome; faeces
76
1
-
Pro
TGG
[ENA]
¢þ
>WENV180500692
OCAJ01000100
[OCAJ] human gut metagenome; faeces
4305
4230
-
Pro
TGG
[ENA]
¢þ
>WENV180505095
OCAO01002087
[OCAO] human gut metagenome; faeces
2228
2153
-
Pro
TGG
[ENA]
¢þ
>WENV180600963
OCPQ01003749
[OCPQ] human gut metagenome; faeces
144
219
+
Pro
TGG
[ENA]
¢þ
>WENV180602902
OCPR01011642
[OCPR] human gut metagenome; human gut
75
150
+
Pro
TGG
[ENA]
¢þ
>WENV181187566
OENZ01000009
[OENZ] human gut metagenome; human gut
29574
29499
-
Pro
TGG
[ENA]
¢þ
>WENV181216841
OFCG01000422
[OFCG] metagenome; Human gut stool
284
359
+
Pro
TGG
[ENA]
¢þ
>WENV181216984
OFCH01000005
[OFCH] metagenome; Human gut stool
94755
94680
-
Pro
TGG
[ENA]
¢þ
>WENV181217772
OFCL01000060
[OFCL] metagenome; Human gut stool
30041
29966
-
Pro
TGG
[ENA]
¢þ
>WENV181218290
OFCM01000105
[OFCM] metagenome; Human gut stool
22877
22802
-
Pro
TGG
[ENA]
¢þ
>WENV181218679
OFCN01000013
[OFCN] metagenome; Human gut stool
30041
29966
-
Pro
TGG
[ENA]
¢þ
>WENV181219576
OFCP01000121
[OFCP] metagenome; Human gut stool
26313
26238
-
Pro
TGG
[ENA]
¢þ
>WENV181220040
OFCQ01000023
[OFCQ] metagenome; Human gut stool
84363
84438
+
Pro
TGG
[ENA]
¢þ
>WENV181221199
OFCU01000352
[OFCU] metagenome; Human gut stool
16206
16131
-
Pro
TGG
[ENA]
¢þ
>WENV181222026
OFDA01000019
[OFDA] metagenome; Human gut stool
30041
29966
-
Pro
TGG
[ENA]
¢þ
>WENV181225668
OFDJ01000006
[OFDJ] metagenome; Human gut stool
94755
94680
-
Pro
TGG
[ENA]
¢þ
>WENV181330883
OFLZ01000151
[OFLZ] human gut metagenome; human gut
36865
36940
+
Pro
TGG
[ENA]
¢þ
>WENV181337146
OFME01000624
[OFME] human gut metagenome; human gut
24948
25023
+
Pro
TGG
[ENA]
¢þ
>WENV181343796
OFMJ01011033
[OFMJ] human gut metagenome; human gut
1237
1311
+
Pro
TGG
[ENA]
¢þ
>WENV181345832
OFML01001113
[OFML] human gut metagenome; human gut
4897
4822
-
Pro
TGG
[ENA]
¢þ
>WENV181347088
OFMM01000661
[OFMM] human gut metagenome; human gut
4216
4141
-
Pro
TGG
[ENA]
¢þ
>WENV181353478
OFMR01013048
[OFMR] human gut metagenome; human gut
163
238
+
Pro
TGG
[ENA]
¢þ
>WENV181447485
OGDU01007594
[OGDU] metagenome; Human gut stool
1805
1730
-
Pro
TGG
[ENA]
¢þ
>W141143978
AWSW01000041
Actinomycetota
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 [AWSW]
30340
30264
-
Pro
TGG
[ENA]
¡û
>WENV181470952
OGEU01034797
[OGEU] metagenome; Human gut stool
986
911
-
Pro
TGG
[ENA]
¢þ
>W08010134
ABQP01000009
Actinomycetota
Bifidobacterium bifidum NCIMB 41171 [ABQP]
198397
198473
+
Pro
TGG
[ENA]
¡û
>WENV181701505
OGPH01001654
[OGPH] human gut metagenome; faeces
15612
15537
-
Pro
TGG
[ENA]
¢þ
>WENV181755851
OGQS01030916
[OGQS] human gut metagenome; faeces
278
353
+
Pro
TGG
[ENA]
¢þ
>WENV181770637
OGRB01012432
[OGRB] human gut metagenome; faeces
33
108
+
Pro
TGG
[ENA]
¢þ
>WENV181785833
OGRN01000147
[OGRN] human gut metagenome; faeces
16845
16770
-
Pro
TGG
[ENA]
¢þ
>WENV181833662
OGUQ01005263
[OGUQ] metagenome; Human gut stool
4227
4152
-
Pro
TGG
[ENA]
¢þ
>WENV182394671
OIEJ01000199
[OIEJ] human gut metagenome; human gut
11429
11504
+
Pro
TGG
[ENA]
¢þ
>WENV182400510
OIEQ01000457
[OIEQ] human gut metagenome; human gut
185
260
+
Pro
TGG
[ENA]
¢þ
>WENV182401551
OIER01003026
[OIER] human gut metagenome; human gut
1756
1831
+
Pro
TGG
[ENA]
¢þ
>WENV182403934
OIEU01000749
[OIEU] human gut metagenome; human gut
899
824
-
Pro
TGG
[ENA]
¢þ
>WENV182446647
OILA01014655
[OILA] human gut metagenome; human gut
95
170
+
Pro
TGG
[ENA]
¢þ
>WENV182462519
OINY01005895
[OINY] human gut metagenome; human gut
830
755
-
Pro
TGG
[ENA]
¢þ
>WENV182477789
OIQL01015961
[OIQL] human gut metagenome; human gut
29
103
+
Pro
TGG
[ENA]
¢þ
>WENV182598498
OJJD01003956
[OJJD] metagenome; faeces
655
730
+
Pro
TGG
[ENA]
¢þ
>WENV182628794
OJKQ01046250
[OJKQ] metagenome; faeces
355
280
-
Pro
TGG
[ENA]
¢þ
>WENV182752692
OJRB01039655
[OJRB] human gut metagenome; stool sample
39
114
+
Pro
TGG
[ENA]
¢þ
>WENV182805121
OJVC01000211
[OJVC] human gut metagenome; human gut
122
197
+
Pro
TGG
[ENA]
¢þ
>WENV182805399
OJVE01000177
[OJVE] human gut metagenome; human gut
15385
15310
-
Pro
TGG
[ENA]
¢þ
>WENV182944309
OKVI01015091
[OKVI] human gut metagenome; human gut
213
288
+
Pro
TGG
[ENA]
¢þ
>WENV182947946
OKVN01000540
[OKVN] human gut metagenome; human gut
14306
14231
-
Pro
TGG
[ENA]
¢þ
>WENV182950759
OKVT01000017
[OKVT] human gut metagenome; human gut
173643
173718
+
Pro
TGG
[ENA]
¢þ
>WENV182954139
OKWA01000060
[OKWA] human gut metagenome; human gut
848
773
-
Pro
TGG
[ENA]
¢þ
>WENV183100379
OLNG01000005
[OLNG] human gut metagenome; faeces
13055
12980
-
Pro
TGG
[ENA]
¢þ
>WENV183119102
OLNT01002298
[OLNT] human gut metagenome; faeces
5015
5090
+
Pro
TGG
[ENA]
¢þ
>WENV183125875
OLNY01002633
[OLNY] human gut metagenome; faeces
4883
4958
+
Pro
TGG
[ENA]
¢þ
>WENV183167496
OLOZ01000258
[OLOZ] human gut metagenome; faeces
4902
4827
-
Pro
TGG
[ENA]
¢þ
>WENV183182267
OLPK01000109
[OLPK] human gut metagenome; faeces
91010
91085
+
Pro
TGG
[ENA]
¢þ
>WENV183188386
OLPP01000569
[OLPP] human gut metagenome; faeces
627
703
+
Pro
TGG
[ENA]
¢þ
>WENV183214206
OLQE01002790
[OLQE] human gut metagenome; faeces
674
600
-
Pro
TGG
[ENA]
¢þ
>WENV183227440
OLQQ01000006
[OLQQ] human gut metagenome; faeces
169539
169614
+
Pro
TGG
[ENA]
¢þ
>WENV183297163
OLSM01001114
[OLSM] human gut metagenome; faeces
9510
9585
+
Pro
TGG
[ENA]
¢þ
>WENV183522755
ONZR01001938
[ONZR] human gut metagenome; human gut
4378
4303
-
Pro
TGG
[ENA]
¢þ
>WENV183523460
ONZS01000659
[ONZS] human gut metagenome; human gut
242
317
+
Pro
TGG
[ENA]
¢þ
>WENV183527852
ONZW01006468
[ONZW] human gut metagenome; human gut
2670
2745
+
Pro
TGG
[ENA]
¢þ
>WENV183560422
OOBT01046080
[OOBT] human gut metagenome; human gut
389
314
-
Pro
TGG
[ENA]
¢þ
>WENV183560897
OOBU01002021
[OOBU] human gut metagenome; human gut
267
342
+
Pro
TGG
[ENA]
¢þ
>WENV183562298
OOBW01000027
[OOBW] human gut metagenome; human gut
141977
142051
+
Pro
TGG
[ENA]
¢þ
>WENV183566861
OOCB01000037
[OOCB] human gut metagenome; human gut
24197
24122
-
Pro
TGG
[ENA]
¢þ
>WENV183581207
OOCN01005699
[OOCN] human gut metagenome; human gut
2237
2311
+
Pro
TGG
[ENA]
¢þ
>WENV183590316
OOCX01000199
[OOCX] human gut metagenome; human gut
48954
49029
+
Pro
TGG
[ENA]
¢þ
>WENV183751502
PPYE01016480
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
866
941
+
Pro
TGG
[ENA]
¢þ
>WENV183774881
PPYF01062647
[PPYF] human gut metagenome; stool from patient with Crohn's disease
845
770
-
Pro
TGG
[ENA]
¢þ
>WENV183781504
PPYF01196976
[PPYF] human gut metagenome; stool from patient with Crohn's disease
541
466
-
Pro
TGG
[ENA]
¢þ
>WENV183790286
PPYF01411170
[PPYF] human gut metagenome; stool from patient with Crohn's disease
159051
159126
+
Pro
TGG
[ENA]
¢þ
>WENV170540156
CWGV01000071
[CWGV] human gut metagenome; ENVO:feces
126849
126773
-
Pro
TGG
[ENA]
¢þ
>WENV170540237
CWGX01000031
[CWGX] human gut metagenome; ENVO:feces
212
288
+
Pro
TGG
[ENA]
¢þ
>WENV170637220
JFBN01314538
[JFBN] chicken gut metagenome; ceca of Broiler chicken
3275
3199
-
Pro
TGG
[ENA]
¢þ
>WENV170637581
JFBN01342603
[JFBN] chicken gut metagenome; ceca of Broiler chicken
3507
3433
-
Pro
TGG
[ENA]
¢þ
>WENV170638664
JFBN01512944
[JFBN] chicken gut metagenome; ceca of Broiler chicken
289
213
-
Pro
TGG
[ENA]
¢þ
>C181033280
CP018757
Actinomycetota
Bifidobacterium bifidum PRI 1 [CP018757]
369643
369568
-
Pro
TGG
-
¡û
>C181071764
CP022723
Actinomycetota
Bifidobacterium bifidum S6 [CP022723]
1531399
1531324
-
Pro
TGG
-
¡û
>C191000929
AP018131
Actinomycetota
Bifidobacterium bifidum LMG 13195 JCM 7004 [AP018131]
1920098
1920173
+
Pro
TGG
-
¡û
>C191000965
AP018132
Actinomycetota
Bifidobacterium bifidum TMC 3115 [AP018132]
139434
139509
+
Pro
TGG
-
¡û
>W141523779
JGYO01000002
Actinomycetota
Bifidobacterium bifidum [JGYO]
1009032
1009108
+
Pro
TGG
[ENA]
¡û
>W141524235
JGYX01000002
Actinomycetota
Bifidobacterium pullorum gallinarum [JGYX]
32962
32888
-
Pro
TGG
[ENA]
¡û
>W141524432
JGZB01000003
Actinomycetota
Bifidobacterium magnum [JGZB]
245294
245370
+
Pro
TGG
[ENA]
¡û
>W141524794
JGZJ01000001
Actinomycetota
Bifidobacterium pullorum [JGZJ]
336438
336514
+
Pro
TGG
[ENA]
¡û
>W141524962
JGZM01000004
Actinomycetota
Bifidobacterium pullorum DSM 6531 = LMG 14934 [JGZM]
27986
27910
-
Pro
TGG
[ENA]
¡û
>W141525298
JGZT01000006
Actinomycetota
Bifidobacterium thermacidophilum subsp. thermacidophilum [JGZT]
29688
29764
+
Pro
TGG
[ENA]
¡û
>W141525345
JGZU01000011
Actinomycetota
Bifidobacterium tsurumiense [JGZU]
15444
15370
-
Pro
TGG
[ENA]
¡û
>W141525386
JGZV01000002
Actinomycetota
Bifidobacterium thermophilum [JGZV]
251078
251154
+
Pro
TGG
[ENA]
¡û
>C191143369
CP035464
Actinomycetota
Bifidobacterium pullorum subsp. gallinarum CACC 514 [CP035464]
1124550
1124624
+
Pro
TGG
-
¡û
>C191207996
LR134344
Actinomycetota
Bifidobacterium bifidum NCTC13001 [LR134344]
1726733
1726658
-
Pro
TGG
-
¡û
>C191208498
LR134354
Actinomycetota
Bifidobacterium longum subsp. infantis NCTC11817 [LR134354]
1908021
1907946
-
Pro
TGG
-
¡û
>W141559139
JHWM01000024
Actinomycetota
Bifidobacterium thermophilum DSM 20212 [JHWM]
11930
11854
-
Pro
TGG
[ENA]
¡û
>W09127294
ACKW01000019
Actinomycetota
Mobiluncus mulieris ATCC 35243 [ACKW]
1026
950
-
Pro
TGG
[ENA]
¡û
>W1910343099
FTRM01000001
Actinomycetota
Bifidobacterium longum [FTRM]
185997
185922
-
Pro
TGG
[ENA]
¡û
>W1910343191
FTRN01000007
Actinomycetota
Bifidobacterium longum [FTRN]
66397
66322
-
Pro
TGG
[ENA]
¡û
>W1910343407
FTRR01000008
Actinomycetota
Bifidobacterium longum [FTRR]
82367
82442
+
Pro
TGG
[ENA]
¡û
>C09102408
CP001095
Actinomycetota
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM [CP001095]
1908227
1908151
-
Pro
TGG
-
¡û
>W1911078260
NMWT01000003
Actinomycetota
Bifidobacterium parmae 77 [NMWT]
26678
26753
+
Pro
TGG
[ENA]
¡û
>W1810049024
PCGX01000008
Actinomycetota
Bifidobacterium thermophilum 1543B [PCGX]
359383
359307
-
Pro
TGG
[ENA]
¡û
>W1810049074
PCGY01000012
Actinomycetota
Bifidobacterium thermophilum 1542B [PCGY]
63486
63411
-
Pro
TGG
[ENA]
¡û
>W1810541422
QDIH01000009
Actinomycetota
Bifidobacterium bifidum DS33_23 [QDIH]
28358
28283
-
Pro
TGG
[ENA]
¡û
>W1810541464
QDII01000001
Actinomycetota
Bifidobacterium bifidum DS31_23 [QDII]
33820
33745
-
Pro
TGG
[ENA]
¡û
>W1810541548
QDIJ01000007
Actinomycetota
Bifidobacterium bifidum DS30_23 [QDIJ]
93116
93191
+
Pro
TGG
[ENA]
¡û
>W1810541678
QDIM01000033
Actinomycetota
Bifidobacterium bifidum DS26_23 [QDIM]
11943
12018
+
Pro
TGG
[ENA]
¡û
>W1810542230
QDIX01000044
Actinomycetota
Bifidobacterium bifidum DS32_23 [QDIX]
272
347
+
Pro
TGG
[ENA]
¡û
>W1810542357
QDJA01000006
Actinomycetota
Bifidobacterium bifidum DS25_23 [QDJA]
19507
19432
-
Pro
TGG
[ENA]
¡û
>W1810792915
QRJI01000013
Actinomycetota
Bifidobacterium bifidum AM18-29 [QRJI]
17625
17550
-
Pro
TGG
[ENA]
¡û
>W1810793122
QRJM01000012
Actinomycetota
Bifidobacterium bifidum AM18-12AC [QRJM]
113
188
+
Pro
TGG
[ENA]
¡û
>W1810793170
QRJN01000012
Actinomycetota
Bifidobacterium bifidum AM18-11 [QRJN]
17631
17556
-
Pro
TGG
[ENA]
¡û
>W1810793273
QRJP01000012
Actinomycetota
Bifidobacterium bifidum AM18-1 [QRJP]
119
194
+
Pro
TGG
[ENA]
¡û
>W1810795935
QRLK01000002
Actinomycetota
Bifidobacterium bifidum AM12-9 [QRLK]
405250
405175
-
Pro
TGG
[ENA]
¡û
>W1810796311
QRLR01000001
Actinomycetota
Bifidobacterium bifidum AM12-10 [QRLR]
176054
176129
+
Pro
TGG
[ENA]
¡û
>W1810798799
QRNM01000011
Actinomycetota
Bifidobacterium bifidum AF45-10 [QRNM]
28492
28417
-
Pro
TGG
[ENA]
¡û
>W1810814831
QSAO01000005
Actinomycetota
Bifidobacterium bifidum AF11-25B [QSAO]
8868
8793
-
Pro
TGG
[ENA]
¡û
>W1810822318
QSGB01000001
Actinomycetota
Bifidobacterium bifidum AM42-15AC [QSGB]
361460
361385
-
Pro
TGG
[ENA]
¡û
>W1810824900
QSHW01000001
Actinomycetota
Bifidobacterium bifidum AM36-1AC [QSHW]
753876
753951
+
Pro
TGG
[ENA]
¡û
>W1810832006
QSOS01000001
Actinomycetota
Bifidobacterium bifidum TM07-4AC [QSOS]
953222
953297
+
Pro
TGG
[ENA]
¡û
>W1810832455
QSPA01000009
Actinomycetota
Bifidobacterium bifidum TM06-5 [QSPA]
8656
8581
-
Pro
TGG
[ENA]
¡û
>W1810832854
QSPI01000009
Actinomycetota
Bifidobacterium bifidum TM06-10 [QSPI]
108131
108206
+
Pro
TGG
[ENA]
¡û
>W1810833264
QSPQ01000001
Actinomycetota
Bifidobacterium bifidum TM05-15 [QSPQ]
963887
963962
+
Pro
TGG
[ENA]
¡û
>W1810833869
QSQB01000001
Actinomycetota
Bifidobacterium bifidum TM04-12 [QSQB]
484884
484809
-
Pro
TGG
[ENA]
¡û
>W1810834051
QSQE01000008
Actinomycetota
Bifidobacterium bifidum TM02-17 [QSQE]
8942
8867
-
Pro
TGG
[ENA]
¡û
>W1810834101
QSQF01000008
Actinomycetota
Bifidobacterium bifidum TM02-15 [QSQF]
8856
8781
-
Pro
TGG
[ENA]
¡û
>W1810836180
QSRS01000001
Actinomycetota
Bifidobacterium bifidum TF07-22 [QSRS]
31175
31100
-
Pro
TGG
[ENA]
¡û
>W1810836925
QSSD01000012
Actinomycetota
Bifidobacterium bifidum TF06-14AC [QSSD]
17631
17556
-
Pro
TGG
[ENA]
¡û
>W1810836973
QSSE01000009
Actinomycetota
Bifidobacterium bifidum TF06-13 [QSSE]
17620
17545
-
Pro
TGG
[ENA]
¡û
>W1810837158
QSSI01000001
Actinomycetota
Bifidobacterium bifidum TF05-39 [QSSI]
964083
964158
+
Pro
TGG
[ENA]
¡û
>W1810837692
QSSS01000001
Actinomycetota
Bifidobacterium bifidum TF05-1 [QSSS]
30330
30255
-
Pro
TGG
[ENA]
¡û
>C151000222
AP012323
Actinomycetota
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 [AP012323]
946763
946839
+
Pro
TGG
[Ensembl]
¡û
>C151068318
CP010412
Actinomycetota
Bifidobacterium bifidum BF3 [CP010412]
999701
999777
+
Pro
TGG
-
¡û
>W10110112
ADBR01000028
Actinomycetota
Mobiluncus mulieris 1·î28Æü [ADBR]
10899
10975
+
Pro
TGG
[ENA]
¡û
>W1510059615
CCWN01000034
Actinomycetota
Bifidobacterium longum subsp. infantis BIC1206122787 [CCWN]
37339
37263
-
Pro
TGG
[ENA]
¡û
>W1510059679
CCWO01000043
Actinomycetota
Bifidobacterium longum subsp. infantis BIC1307292462 [CCWO]
90855
90779
-
Pro
TGG
[ENA]
¡û
>W1510059746
CCWP01000038
Actinomycetota
Bifidobacterium longum subsp. infantis BIC1401111250 [CCWP]
185957
185881
-
Pro
TGG
[ENA]
¡û
>W1510059813
CCWQ01000031
Actinomycetota
Bifidobacterium longum subsp. infantis BIC1401212621b [CCWQ]
185973
185897
-
Pro
TGG
[ENA]
¡û
>W1510059879
CCWR01000025
Actinomycetota
Bifidobacterium longum subsp. infantis BIB1401272845a [CCWR]
185949
185873
-
Pro
TGG
[ENA]
¡û
>W1510059946
CCWS01000027
Actinomycetota
Bifidobacterium longum subsp. infantis BIC1401212621a [CCWS]
185977
185901
-
Pro
TGG
[ENA]
¡û
>W1510060013
CCWT01000033
Actinomycetota
Bifidobacterium longum subsp. infantis BIB1401272845b [CCWT]
185973
185897
-
Pro
TGG
[ENA]
¡û
>W1510060080
CCWU01000027
Actinomycetota
Bifidobacterium longum subsp. infantis BIB1401242951 [CCWU]
185945
185869
-
Pro
TGG
[ENA]
¡û
>W10127861
AEET01000029
Actinomycetota
Mobiluncus mulieris ATCC 35239 [AEET]
18412
18336
-
Pro
TGG
[ENA]
¡û
>C11102294
CP001840
Actinomycetota
Bifidobacterium bifidum PRL2010 [CP001840]
940157
940233
+
Pro
TGG
[Ensembl]
¡û
>C11102342
CP002220
Actinomycetota
Bifidobacterium bifidum S17 [CP002220]
962672
962748
+
Pro
TGG
[Ensembl]
¡û
>C11103187
AP010889
Actinomycetota
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM [AP010889]
1908017
1907941
-
Pro
TGG
-
¡û
>C11103254
AP010889
Actinomycetota
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM [AP010889]
1908017
1907941
-
Pro
TGG
-
¡û
>W11112549
ADBR01000028
Actinomycetota
Mobiluncus mulieris 1·î28Æü [ADBR]
10899
10975
+
Pro
TGG
[ENA]
¡û
>W1511364985
JSDS01000006
Actinomycetota
Bifidobacterium bifidum 156B [JSDS]
856981
857057
+
Pro
TGG
[ENA]
¡û
>W1511365031
JSDT01000002
Actinomycetota
Bifidobacterium bifidum 324B [JSDT]
997150
997226
+
Pro
TGG
[ENA]
¡û
>W1511365091
JSDU01000005
Actinomycetota
Bifidobacterium bifidum 85B [JSDU]
29228
29304
+
Pro
TGG
[ENA]
¡û
>W1511365141
JSDV01000005
Actinomycetota
Bifidobacterium bifidum A8 [JSDV]
356
432
+
Pro
TGG
[ENA]
¡û
>W1511365187
JSDW01000012
Actinomycetota
Bifidobacterium bifidum IPLA 20015 [JSDW]
224288
224364
+
Pro
TGG
[ENA]
¡û
>W1511365238
JSDX01000014
Actinomycetota
Bifidobacterium bifidum IPLA 20017 [JSDX]
252322
252398
+
Pro
TGG
[ENA]
¡û
>W1511365280
JSDY01000004
Actinomycetota
Bifidobacterium bifidum LMG 11582 [JSDY]
934630
934706
+
Pro
TGG
[ENA]
¡û
>W1511365334
JSDZ01000011
Actinomycetota
Bifidobacterium bifidum LMG 11583 [JSDZ]
485514
485590
+
Pro
TGG
[ENA]
¡û
>W1511365384
JSEA01000021
Actinomycetota
Bifidobacterium bifidum LMG 13195 [JSEA]
74577
74653
+
Pro
TGG
[ENA]
¡û
>W1511365425
JSEB01000005
Actinomycetota
Bifidobacterium bifidum LMG 13200 [JSEB]
811556
811632
+
Pro
TGG
[ENA]
¡û
>W11135349
AEET01000029
Actinomycetota
Mobiluncus mulieris ATCC 35239 [AEET]
18412
18336
-
Pro
TGG
[ENA]
¡û
>W11137202
AEGV01000038
Actinomycetota
Mobiluncus mulieris FB024-16 [AEGV]
39466
39542
+
Pro
TGG
[ENA]
¡û
>C121001423
CP001361
Actinomycetota
Bifidobacterium bifidum BGN4 [CP001361]
914084
914160
+
Pro
TGG
[Ensembl]
¡û
>W121077157
AKCA01000001
Actinomycetota
Bifidobacterium bifidum NCIMB 41171 [AKCA]
718118
718194
+
Pro
TGG
[ENA]
¡û
>W1610045709
BBBT01000098
Actinomycetota
Bifidobacterium bifidum JCM 1254 [BBBT]
7507
7431
-
Pro
TGG
[ENA]
¡û
>W1610074712
BCXK01000021
Actinomycetota
Bifidobacterium bifidum [BCXK]
8741
8665
-
Pro
TGG
[ENA]
¡û
>W1610098171
CYXQ01000001
Actinomycetota
Bifidobacterium bifidum [CYXQ]
258264
258340
+
Pro
TGG
[ENA]
¡û
>C131013367
CP004346
Actinomycetota
Bifidobacterium thermophilum RBL67 [CP004346]
1108243
1108167
-
Pro
TGG
[Ensembl]
¡û
>W1610518585
JDTM01000005
Actinomycetota
Bifidobacterium pullorum DSM 6531 = LMG 14934 [JDTM]
246586
246662
+
Pro
TGG
[ENA]
¡û
>W1610518686
JDTO01000008
Actinomycetota
Bifidobacterium thermacidophilum subsp. thermacidophilum DSM 15837 [JDTO]
86926
86850
-
Pro
TGG
[ENA]
¡û
>W1610518757
JDTQ01000004
Actinomycetota
Bifidobacterium porcinum subsp. porcinum DSM 17755 [JDTQ]
274190
274114
-
Pro
TGG
[ENA]
¡û
>W1610518812
JDTR01000009
Actinomycetota
Bifidobacterium tsurumiense DSM 17777 [JDTR]
101811
101885
+
Pro
TGG
[ENA]
¡û
>W1610518879
JDTT01000008
Actinomycetota
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM DSM 20088 [JDTT]
29240
29316
+
Pro
TGG
[ENA]
¡û
>W1610519285
JDUB01000010
Actinomycetota
Bifidobacterium thermophilum DSM 20210 [JDUB]
116277
116201
-
Pro
TGG
[ENA]
¡û
>W1610519477
JDUG01000001
Actinomycetota
Bifidobacterium magnum DSM 20222 [JDUG]
78698
78774
+
Pro
TGG
[ENA]
¡û
>W1610519575
JDUI01000002
Actinomycetota
Bifidobacterium pullorum DSM 20433 [JDUI]
14104
14028
-
Pro
TGG
[ENA]
¡û
>W1610519831
JDUN01000003
Actinomycetota
Bifidobacterium pullorum DSM 20670 [JDUN]
229888
229962
+
Pro
TGG
[ENA]
¡û
>W1610686241
LKUR01000016
Actinomycetota
Bifidobacterium bifidum [LKUR]
32344
32268
-
Pro
TGG
[ENA]
¡û
>W1610889438
LRPO01000016
Actinomycetota
Bifidobacterium bifidum [LRPO]
40337
40413
+
Pro
TGG
[ENA]
¡û
>W1610921344
LSUI01000029
Actinomycetota
Bifidobacterium bifidum [LSUI]
17002
16926
-
Pro
TGG
[ENA]
¡û
>W1610921427
LSUL01000001
Actinomycetota
Bifidobacterium bifidum [LSUL]
28886
28810
-
Pro
TGG
[ENA]
¡û
>W1710042550
BBBT01000098
Actinomycetota
Bifidobacterium bifidum JCM 1254 [BBBT]
7507
7431
-
Pro
TGG
[ENA]
¡û
>W1710072527
BCXK01000021
Actinomycetota
Bifidobacterium bifidum [BCXK]
8741
8665
-
Pro
TGG
[ENA]
¡û
>W1710100926
CYXQ01000001
Actinomycetota
Bifidobacterium bifidum [CYXQ]
258264
258340
+
Pro
TGG
[ENA]
¡û
>W1710558397
FOLU01000011
Actinomycetota
Bifidobacterium bifidum [FOLU]
28350
28274
-
Pro
TGG
[ENA]
¡û
>W1710614105
JDTM01000005
Actinomycetota
Bifidobacterium pullorum DSM 6531 = LMG 14934 [JDTM]
246586
246662
+
Pro
TGG
[ENA]
¡û
>W1710614206
JDTO01000008
Actinomycetota
Bifidobacterium thermacidophilum subsp. thermacidophilum DSM 15837 [JDTO]
86926
86850
-
Pro
TGG
[ENA]
¡û
>W1710614277
JDTQ01000004
Actinomycetota
Bifidobacterium porcinum subsp. porcinum DSM 17755 [JDTQ]
274190
274114
-
Pro
TGG
[ENA]
¡û
>W1710614332
JDTR01000009
Actinomycetota
Bifidobacterium tsurumiense DSM 17777 [JDTR]
101811
101885
+
Pro
TGG
[ENA]
¡û
>W1710614740
JDUB01000010
Actinomycetota
Bifidobacterium thermophilum DSM 20210 [JDUB]
116277
116201
-
Pro
TGG
[ENA]
¡û
>W1710614932
JDUG01000001
Actinomycetota
Bifidobacterium magnum DSM 20222 [JDUG]
78698
78774
+
Pro
TGG
[ENA]
¡û
>W1710615030
JDUI01000002
Actinomycetota
Bifidobacterium pullorum DSM 20433 [JDUI]
14104
14028
-
Pro
TGG
[ENA]
¡û
>W1710615244
JDUN01000003
Actinomycetota
Bifidobacterium pullorum DSM 20670 [JDUN]
229888
229962
+
Pro
TGG
[ENA]
¡û
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Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
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Representative sequence of each cluster
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