tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.273487 (86 seq.)
>W1710808912 LKDZ01000008 Betaproteobacteria Variovorax boronicumulans [LKDZ] 46795 46871 + Pro TGG [ENA] ¡û
>W1710821627 LKTU01000016 Betaproteobacteria Variovorax paradoxus [LKTU] 142883 142959 + Pro TGG [ENA] ¡û
>W1710821703 LKTV01000082 Betaproteobacteria Variovorax paradoxus [LKTV] 40422 40498 + Pro TGG [ENA] ¡û
>W1710821741 LKTW01000082 Betaproteobacteria Variovorax paradoxus [LKTW] 1103 1027 - Pro TGG [ENA] ¡û
>W1710821798 LKTX01000073 Betaproteobacteria Variovorax paradoxus [LKTX] 40411 40487 + Pro TGG [ENA] ¡û
>W1710821851 LKTY01000075 Betaproteobacteria Variovorax paradoxus [LKTY] 40412 40488 + Pro TGG [ENA] ¡û
>W1710821895 LKTZ01000065 Betaproteobacteria Variovorax paradoxus [LKTZ] 43730 43806 + Pro TGG [ENA] ¡û
>W1710860129 LMCQ01000011 Betaproteobacteria Variovorax sp. Root318D1 [LMCQ] 36304 36380 + Pro TGG [ENA] ¡û
>W1710861777 LMDW01000016 Betaproteobacteria Variovorax sp. Root411 [LMDW] 42878 42802 - Pro TGG [ENA] ¡û
>W1710862505 LMEK01000027 Betaproteobacteria Variovorax sp. Root434 [LMEK] 200058 200134 + Pro TGG [ENA] ¡û
>W1710863093 LMEV01000017 Betaproteobacteria Variovorax sp. Root473 [LMEV] 1080641 1080565 - Pro TGG [ENA] ¡û
>W1711123815 LUJJ01000012 Betaproteobacteria Variovorax boronicumulans [LUJJ] 346308 346384 + Pro TGG [ENA] ¡û
>W1711143365 LVHG01000055 Betaproteobacteria Variovorax paradoxus [LVHG] 79109 79185 + Pro TGG [ENA] ¡û
>W1711386522 MEFM01000059 Betaproteobacteria Variovorax sp. SCN 67-85 [MEFM] 378863 378939 + Pro TGG [ENA] ¡û
>W1711387501 MEGR01000097 Betaproteobacteria Variovorax sp. SCN 67-20 [MEGR] 373509 373433 - Pro TGG [ENA] ¡û
>W1711506633 MKWO01000041 Betaproteobacteria Variovorax sp. 67-131 [MKWO] 82710 82786 + Pro TGG [ENA] ¡û
>W131174626 ARIP01000053 Betaproteobacteria Variovorax paradoxus 4MFCol3.1 [ARIP] 110033 110109 + Pro TGG [ENA] ¡û
>W131180360 ARNA01000050 Betaproteobacteria Variovorax paradoxus 110B [ARNA] 738138 738214 + Pro TGG [ENA] ¡û
>W131214384 ATUC01000035 Betaproteobacteria Variovorax sp. JGI 001013-H06 [ATUC] 4354 4430 + Pro TGG [ENA] ¡û
>WENV180019580 FTCD01000119 [FTCD] metagenome; soil 952 1028 + Pro TGG [ENA] ¢þ
>WENV181364789 OFPD01000057 [OFPD] sediment metagenome; Lake sediment 348 424 + Pro TGG [ENA] ¢þ
>WENV181372075 OFQW01013537 [OFQW] wastewater metagenome; Exp Tend NO 90WW 931 855 - Pro TGG [ENA] ¢þ
>W141170368 AXXS01000019 Betaproteobacteria Variovorax sp. JGI 0001013-M04 [AXXS] 12346 12270 - Pro TGG [ENA] ¡û
>WENV183731166 PJTS01014906 [PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment 268 344 + Pro TGG [ENA] ¢þ
>WENV183735660 PJUB01000372 [PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment 5476 5400 - Pro TGG [ENA] ¢þ
>WENV183736339 PJUC01000908 [PJUC] soil metagenome; Soil enriched on filter paper 5496 5420 - Pro TGG [ENA] ¢þ
>WENV183741391 PJUG01000002 [PJUG] feces metagenome; Chicken feces (2) enriched on wood chips: beechwood xylan treatment 217523 217447 - Pro TGG [ENA] ¢þ
>WENV183741898 PJUH01000003 [PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment 596551 596627 + Pro TGG [ENA] ¢þ
>WENV183744405 PJUK01017899 [PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment 231 155 - Pro TGG [ENA] ¢þ
>WENV170557975 CXWL01044768 [CXWL] groundwater metagenome; biofilm material 1847 1923 + Pro TGG [ENA] ¢þ
>WENV171003362 NNBT01006790 [NNBT] plant metagenome; symbiotic tissue sample KVJ10 443 519 + Pro TGG [ENA] ¢þ
>WENV171003616 NNBU01000823 [NNBU] plant metagenome; symbiotic tissue sample KVJ2 727 651 - Pro TGG [ENA] ¢þ
>C181078472 CP023284 Betaproteobacteria Variovorax boronicumulans J1 [CP023284] 4204676 4204752 + Pro TGG - ¡û
>C181159369 CP027773 Betaproteobacteria Variovorax sp. PMC12 [CP027773, CP027774] 741338 741414 + Pro TGG - ¡û
>W141558066 JHVQ01000003 Betaproteobacteria Variovorax sp. URHB0020 [JHVQ] 865973 865897 - Pro TGG [ENA] ¡û
>W09119927 ACEE01000018 Betaproteobacteria Variovorax paradoxus S110 [ACEE] 44115 44191 + Pro TGG [ENA] ¡û
>C141002576 CP003911 Betaproteobacteria Variovorax paradoxus B4 [CP003911, CP003912] 2595754 2595678 - Pro TGG [Ensembl] ¡û
>W1910792813 MRCN01000002 Betaproteobacteria Variovorax boronicumulans ACN3 [MRCN] 529210 529134 - Pro TGG [ENA] ¡û
>C09111125 CP001635 Betaproteobacteria Variovorax paradoxus [CP001635] 2460750 2460674 - Pro TGG [Ensembl] ¡û
>W1911496697 OCMW01000001 Betaproteobacteria Variovorax sp. YR752 [OCMW] 4337958 4338034 + Pro TGG [ENA] ¡û
>W1911647329 QAJK01000024 Betaproteobacteria Variovorax sp. KBW07 [QAJK] 35691 35615 - Pro TGG [ENA] ¡û
>W1911775304 QXMN01000002 Betaproteobacteria Acidovorax cavernicola 1011MAR4D40.2 [QXMN] 150920 150996 + Pro TGG [ENA] ¡û
>W1810072210 PEFF01000001 Betaproteobacteria Variovorax sp. 54 [PEFF] 447106 447182 + Pro TGG [ENA] ¡û
>W1810486649 QAYA01000001 Betaproteobacteria Variovorax sp. GV040 [QAYA] 264446 264370 - Pro TGG [ENA] ¡û
>W1810577504 QEOH01000001 Betaproteobacteria Variovorax sp. GV014 [QEOH] 359772 359696 - Pro TGG [ENA] ¡û
>W1810672520 QJTM01000001 Betaproteobacteria Variovorax sp. GV035 [QJTM] 264446 264370 - Pro TGG [ENA] ¡û
>W1810676088 QKLT01000001 Betaproteobacteria Variovorax sp. GV042 [QKLT] 264446 264370 - Pro TGG [ENA] ¡û
>W1810682457 QKUE01000001 Betaproteobacteria Variovorax sp. GV004 [QKUE] 264446 264370 - Pro TGG [ENA] ¡û
>SRA1015788 SRR023846.200981 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 13 89 + Pro TGG [SRA]
>SRA1016479 SRR023846.522768 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 13 89 + Pro TGG [SRA]
>W1511352975 JROV01001082 Betaproteobacteria Variovorax paradoxus ZNC0006 [JROV] 5522 5446 - Pro TGG [ENA] ¡û
>C11123614 CP002417 Betaproteobacteria Variovorax paradoxus EPS [CP002417] 2690914 2690838 - Pro TGG [Ensembl] ¡û
>W1511508919 JXQQ01000016 Betaproteobacteria Variovorax paradoxus MEDvA23 [JXQQ] 37147 37071 - Pro TGG [ENA] ¡û
>W1511554998 JZWI01000014 Betaproteobacteria Variovorax paradoxus TBEA6 [JZWI] 6635 6711 + Pro TGG [ENA] ¡û
>C161073156 CP014517 Betaproteobacteria Variovorax sp. PAMC 28711 [CP014517] 42738 42814 + Pro TGG [Ensembl] ¡û
>W121084979 AKIW01000087 Betaproteobacteria Variovorax sp. CF313 [AKIW] 13320 13244 - Pro TGG [ENA] ¡û
>W1610072147 BCUS01000021 Betaproteobacteria Variovorax boronicumulans NBRC 103145 [BCUS] 61799 61875 + Pro TGG [ENA] ¡û
>W1610072181 BCUT01000001 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 208582 208658 + Pro TGG [ENA] ¡û
>W1610685589 LKTU01000016 Betaproteobacteria Variovorax paradoxus [LKTU] 142883 142959 + Pro TGG [ENA] ¡û
>W1610685665 LKTV01000082 Betaproteobacteria Variovorax paradoxus [LKTV] 40422 40498 + Pro TGG [ENA] ¡û
>W1610685703 LKTW01000082 Betaproteobacteria Variovorax paradoxus [LKTW] 1103 1027 - Pro TGG [ENA] ¡û
>W1610685760 LKTX01000073 Betaproteobacteria Variovorax paradoxus [LKTX] 40411 40487 + Pro TGG [ENA] ¡û
>W1610685813 LKTY01000075 Betaproteobacteria Variovorax paradoxus [LKTY] 40412 40488 + Pro TGG [ENA] ¡û
>W1610685857 LKTZ01000065 Betaproteobacteria Variovorax paradoxus [LKTZ] 43730 43806 + Pro TGG [ENA] ¡û
>W1610722475 LMCQ01000011 Betaproteobacteria Variovorax sp. Root318D1 [LMCQ] 36304 36380 + Pro TGG [ENA] ¡û
>W1610724123 LMDW01000016 Betaproteobacteria Variovorax sp. Root411 [LMDW] 42878 42802 - Pro TGG [ENA] ¡û
>W1610724851 LMEK01000027 Betaproteobacteria Variovorax sp. Root434 [LMEK] 200058 200134 + Pro TGG [ENA] ¡û
>W1610725439 LMEV01000017 Betaproteobacteria Variovorax sp. Root473 [LMEV] 1080641 1080565 - Pro TGG [ENA] ¡û
>W1610954373 LVHG01000055 Betaproteobacteria Variovorax paradoxus [LVHG] 79109 79185 + Pro TGG [ENA] ¡û
>W1710069349 BCUS01000021 Betaproteobacteria Variovorax boronicumulans NBRC 103145 [BCUS] 61799 61875 + Pro TGG [ENA] ¡û
>W1710069383 BCUT01000001 Betaproteobacteria Variovorax paradoxus NBRC 15149 [BCUT] 208582 208658 + Pro TGG [ENA] ¡û
>W1710506195 FMUJ01000003 Betaproteobacteria Variovorax sp. EL159 [FMUJ] 734188 734264 + Pro TGG [ENA] ¡û
>W1710517957 FNDR01000007 Betaproteobacteria Variovorax sp. OV700 [FNDR] 234 158 - Pro TGG [ENA] ¡û
>W1710530026 FNOL01000005 Betaproteobacteria Variovorax sp. YR634 [FNOL] 13021 12945 - Pro TGG [ENA] ¡û
>W1710531354 FNPM01000002 Betaproteobacteria Variovorax sp. YR266 [FNPM] 747945 748021 + Pro TGG [ENA] ¡û
>W1710538141 FNUI01000006 Betaproteobacteria Variovorax sp. NFACC28 [FNUI] 9539 9463 - Pro TGG [ENA] ¡û
>W1710539554 FNVM01000006 Betaproteobacteria Variovorax sp. NFACC29 [FNVM] 483905 483981 + Pro TGG [ENA] ¡û
>W1710542712 FNZJ01000003 Betaproteobacteria Variovorax sp. OK202 [FNZJ] 6604 6528 - Pro TGG [ENA] ¡û
>W1710545278 FOBJ01000001 Betaproteobacteria Variovorax sp. YR750 [FOBJ] 747248 747324 + Pro TGG [ENA] ¡û
>W1710554284 FOII01000001 Betaproteobacteria Variovorax sp. OV084 [FOII] 1302548 1302624 + Pro TGG [ENA] ¡û
>W1710557140 FOKS01000006 Betaproteobacteria Variovorax sp. NFACC26 [FOKS] 9489 9413 - Pro TGG [ENA] ¡û
>W1710558151 FOLP01000003 Betaproteobacteria Variovorax sp. OK212 [FOLP] 6550 6474 - Pro TGG [ENA] ¡û
>W1710562246 FOOV01000003 Betaproteobacteria Variovorax sp. NFACC27 [FOOV] 483907 483983 + Pro TGG [ENA] ¡û
>W1710571862 FOWG01000002 Betaproteobacteria Variovorax sp. PDC80 [FOWG] 1894 1818 - Pro TGG [ENA] ¡û
>W1710572106 FOWL01000001 Betaproteobacteria Variovorax sp. OK605 [FOWL] 769007 769083 + Pro TGG [ENA] ¡û
>W1710573292 FOXJ01000001 Betaproteobacteria Variovorax sp. 770b2 [FOXJ] 1028813 1028737 - Pro TGG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK