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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.274342 (3 seq.)
>W1910736047
MHMW01000021
Unclassified
Candidatus Portnoybacteria bacterium RBG_19FT_COMBO_36_7 [MHMW]
56907
56983
+
Val
GAC
[ENA]
¡û
>W1910740184
MHSS01000001
Unclassified
Candidatus Terrybacteria bacterium RIFCSPHIGHO2_01_FULL_48_17 [MHSS]
47979
48052
+
Val
GAC
[ENA]
¡û
>W1910740464
MHSY01000020
Unclassified
Candidatus Terrybacteria bacterium RIFCSPLOWO2_01_FULL_48_14 [MHSY]
32186
32113
-
Val
GAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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