This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.274928 (29 seq.)
>W141145398
AWUN01000007
Actinomycetota
Bifidobacterium sp. 7101 [AWUN]
103534
103608
+
Ile
GAT
[ENA]
¡û
>W141145427
AWUO01000006
Actinomycetota
Bifidobacterium sp. A11 [AWUO]
32537
32463
-
Ile
GAT
[ENA]
¡û
>C181027228
CP017696
Actinomycetota
Bifidobacterium asteroides DSM 20089 [CP017696]
2014934
2014860
-
Ile
GAT
-
¡û
>W141523601
JGYK01000003
Actinomycetota
Bifidobacterium actinocoloniiforme DSM 22766 [JGYK]
12902
12828
-
Ile
GAT
[ENA]
¡û
>W1911162323
NPOQ01000004
Actinomycetota
Bifidobacterium sp. wkB344 [NPOQ]
35226
35152
-
Ile
GAT
[ENA]
¡û
>W1911162366
NPOR01000010
Actinomycetota
Bifidobacterium sp. wkB338 [NPOR]
13605
13679
+
Ile
GAT
[ENA]
¡û
>W1810049609
PCHJ01000003
Actinomycetota
Bifidobacterium asteroides 1460B [PCHJ]
3400
3326
-
Ile
GAT
[ENA]
¡û
>W1810052402
PDCH01000003
Actinomycetota
Bifidobacterium xylocopae XV2 [PDCH]
87766
87840
+
Ile
GAT
[ENA]
¡û
>W1810603496
QGLH01000001
Actinomycetota
Bifidobacterium asteroides ESL0170 [QGLH]
57593
57519
-
Ile
GAT
[ENA]
¡û
>W1810603527
QGLI01000001
Actinomycetota
Bifidobacterium indicum ESL0197 [QGLI]
56767
56693
-
Ile
GAT
[ENA]
¡û
>W1810603567
QGLJ01000002
Actinomycetota
Bifidobacterium asteroides ESL0198 [QGLJ]
27480
27406
-
Ile
GAT
[ENA]
¡û
>W1810603617
QGLK01000001
Actinomycetota
Bifidobacterium asteroides ESL0199 [QGLK]
54185
54111
-
Ile
GAT
[ENA]
¡û
>W1810603651
QGLL01000001
Actinomycetota
Bifidobacterium asteroides ESL0200 [QGLL]
65054
64980
-
Ile
GAT
[ENA]
¡û
>C151008635
CP006018
Actinomycetota
Bifidobacterium indicum LMG 11587 = DSM 20214 [CP006018]
56655
56581
-
Ile
GAT
[Ensembl]
¡û
>C151021883
CP007287
Actinomycetota
Bifidobacterium coryneforme LMG18911 [CP007287]
58176
58102
-
Ile
GAT
[Ensembl]
¡û
>C151086297
CP011786
Actinomycetota
Bifidobacterium actinocoloniiforme DSM 22766 [CP011786]
1434278
1434204
-
Ile
GAT
-
¡û
>W1511483974
JWME01000002
Actinomycetota
Bifidobacterium asteroides Bin2 [JWME]
38153
38079
-
Ile
GAT
[ENA]
¡û
>W1511484015
JWMF01000002
Actinomycetota
Bifidobacterium mellis Bin7 [JWMF]
30936
30862
-
Ile
GAT
[ENA]
¡û
>W1511501506
JXBX01000002
Actinomycetota
Bifidobacterium coryneforme Bma6 [JXBX]
24868
24794
-
Ile
GAT
[ENA]
¡û
>W1511505360
JXJS01000002
Actinomycetota
Bifidobacterium asteroides Hma3 [JXJS]
28711
28637
-
Ile
GAT
[ENA]
¡û
>C131003042
CP003325
Actinomycetota
Bifidobacterium asteroides PRL2011 [CP003325]
66866
66792
-
Ile
GAT
[Ensembl]
¡û
>W1610518973
JDTU01000034
Actinomycetota
Bifidobacterium asteroides DSM 20089 [JDTU]
17739
17813
+
Ile
GAT
[ENA]
¡û
>W1610519430
JDUE01000007
Actinomycetota
Bifidobacterium indicum LMG 11587 = DSM 20214 [JDUE]
16672
16746
+
Ile
GAT
[ENA]
¡û
>W1610519471
JDUF01000018
Actinomycetota
Bifidobacterium coryneforme DSM 20216 [JDUF]
82018
82092
+
Ile
GAT
[ENA]
¡û
>W1610520008
JDUR01000018
Actinomycetota
Bifidobacterium actinocoloniiforme DSM 22766 [JDUR]
80444
80518
+
Ile
GAT
[ENA]
¡û
>W1710614428
JDTU01000034
Actinomycetota
Bifidobacterium asteroides DSM 20089 [JDTU]
17739
17813
+
Ile
GAT
[ENA]
¡û
>W1710614885
JDUE01000007
Actinomycetota
Bifidobacterium indicum LMG 11587 = DSM 20214 [JDUE]
16672
16746
+
Ile
GAT
[ENA]
¡û
>W1710614926
JDUF01000018
Actinomycetota
Bifidobacterium coryneforme DSM 20216 [JDUF]
82018
82092
+
Ile
GAT
[ENA]
¡û
>W1710615421
JDUR01000018
Actinomycetota
Bifidobacterium actinocoloniiforme DSM 22766 [JDUR]
80444
80518
+
Ile
GAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK