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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.275355 (11 seq.)
>W1711641302
MPYQ03000107
Gammaproteobacteria
Klebsiella pneumoniae [MPYQ]
139337
139261
-
Met
CAT
[ENA]
¡û
>W1712021660
NEZW01000068
Gammaproteobacteria
Klebsiella pneumoniae [NEZW]
14976
14900
-
Met
CAT
[ENA]
¡û
>W1712054232
NFXP01000061
Gammaproteobacteria
Klebsiella pneumoniae [NFXP]
227970
227894
-
Met
CAT
[ENA]
¡û
>W1810349982
PVDR01000053
Gammaproteobacteria
Klebsiella pneumoniae subsp. pneumoniae 1545/2475 [PVDR]
15418
15342
-
Met
CAT
[ENA]
¡û
>W1830010904
QCYA01000042
Gammaproteobacteria
Vibrio vulnificus Vv006 [QCYA]
45473
45397
-
Met
CAT
[ENA]
¡û
>W1730026110
MCOM01000110
Gammaproteobacteria
Citrobacter portucalensis freundii [MCOM]
477
401
-
Met
CAT
[ENA]
¡û
>W1730026237
MDCW01000056
Gammaproteobacteria
Citrobacter freundii [MDCW]
478
402
-
Met
CAT
[ENA]
¡û
>W1730026252
MDCX01000160
Gammaproteobacteria
Citrobacter freundii [MDCX]
478
402
-
Met
CAT
[ENA]
¡û
>W1730026259
MDCY01000095
Gammaproteobacteria
Citrobacter freundii [MDCY]
478
402
-
Met
CAT
[ENA]
¡û
>W1730026261
MDCZ01000020
Gammaproteobacteria
Citrobacter freundii [MDCZ]
478
402
-
Met
CAT
[ENA]
¡û
>W1730026272
MDDA01000017
Gammaproteobacteria
Citrobacter freundii [MDDA]
478
402
-
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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