tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.276976 (137 seq.)
>W1711018856 LQXH01000007 Gammaproteobacteria Alteromonas sp. W12 [LQXH] 771175 771251 + Arg TCT [ENA] ¡û
>W1711078181 LSMP01000171 Gammaproteobacteria Alteromonas sp. Nap_26 [LSMP] 12005 12081 + Arg TCT [ENA] ¡û
>W1711125592 LUNL01000150 Gammaproteobacteria Alteromonas macleodii [LUNL] 5561 5485 - Arg TCT [ENA] ¡û
>W1711125639 LUNN01000343 Gammaproteobacteria Alteromonas macleodii [LUNN] 2798 2874 + Arg TCT [ENA] ¡û
>W1711228029 LXWE01000013 Gammaproteobacteria Alteromonadaceae bacterium XY-R5 [LXWE] 13093 13017 - Arg TCT [ENA] ¡û
>W1711389067 MEJH01000003 Gammaproteobacteria Alteromonas abrolhosensis PEL 67E [MEJH] 478842 478766 - Arg TCT [ENA] ¡û
>W1711437945 MIPW01000017 Gammaproteobacteria Alteromonas macleodii [MIPW] 103834 103758 - Arg TCT [ENA] ¡û
>W1711438014 MIPX01000016 Gammaproteobacteria Alteromonas macleodii [MIPX] 103834 103758 - Arg TCT [ENA] ¡û
>W1711438082 MIPY01000020 Gammaproteobacteria Alteromonas macleodii [MIPY] 104120 104044 - Arg TCT [ENA] ¡û
>W1711438150 MIPZ01000018 Gammaproteobacteria Alteromonas macleodii [MIPZ] 103834 103758 - Arg TCT [ENA] ¡û
>W1711589019 MODU01000004 Gammaproteobacteria Alteromonas sp. V450 [MODU] 1827310 1827234 - Arg TCT [ENA] ¡û
>W1712106970 NIWW01000008 Gammaproteobacteria Lacimicrobium sp. SS2-24 [NIWW] 160594 160670 + Arg TCT [ENA] ¡û
>C171071572 CP018024 Gammaproteobacteria Alteromonas mediterranea CP48 [CP018024] 2854597 2854521 - Arg TCT - ¡û
>C171071635 CP018026 Gammaproteobacteria Alteromonas mediterranea AR43 [CP018026] 2857351 2857275 - Arg TCT - ¡û
>C171071690 CP018027 Gammaproteobacteria Alteromonas mediterranea CP49 [CP018027] 2879486 2879410 - Arg TCT - ¡û
>C171071753 CP018029 Gammaproteobacteria Alteromonas mediterranea RG65 [CP018029] 2874507 2874431 - Arg TCT - ¡û
>C171071816 CP018031 Gammaproteobacteria Alteromonas sp. RW2A1 [CP018031] 2853794 2853718 - Arg TCT - ¡û
>C171103095 CP020038 Gammaproteobacteria Agarilytica rhodophyticola 017 [CP020038] 3922912 3922836 - Arg TCT - ¡û
>W131176088 ARJT01000032 Gammaproteobacteria Salinimonas chungwhensis DSM 16280 [ARJT] 85062 84986 - Arg TCT [ENA] ¡û
>W131184808 ARTF01000001 Gammaproteobacteria gamma proteobacterium SCGC AAA160-D02 [ARTF] 146333 146257 - Arg TCT [ENA] ¡û
>C020883 CP000282 Gammaproteobacteria Saccharophagus degradans 2-40 [CP000282] 2421999 2422075 + Arg TCT [Ensembl] ¡û
>w014055 AAOD01000045 Gammaproteobacteria Alteromonas mediterranea 'Deep ecotype' [AAOD] 26671 26747 + Arg TCT [ENA] ¡û
>WENV180052739 MPLU02322222 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 758 834 + Arg TCT [ENA] ¢þ
>WENV180100788 OAOS01039456 [OAOS] marine metagenome; ENVO.00002110 217 293 + Arg TCT [ENA] ¢þ
>WENV180108397 OAPH01106507 [OAPH] marine metagenome; seawater 248 172 - Arg TCT [ENA] ¢þ
>WENV180109096 OAPJ01005842 [OAPJ] marine metagenome; ENVO 00002150 536 612 + Arg TCT [ENA] ¢þ
>WENV180294283 OBIY01061391 [OBIY] beach sand metagenome; beach sand 77 1 - Arg TCT [ENA] ¢þ
>WENV180362698 OBNX01021239 [OBNX] marine metagenome; ENVO:00002010 601 677 + Arg TCT [ENA] ¢þ
>WENV180363489 OBNY01075915 [OBNY] marine metagenome; ENVO:00002010 364 288 - Arg TCT [ENA] ¢þ
>WENV180384350 OBOX01017242 [OBOX] marine metagenome; Sterile flask 479 403 - Arg TCT [ENA] ¢þ
>WENV180398756 OBQA01134645 [OBQA] marine metagenome; PVDF and polycarbonate filters 226 302 + Arg TCT [ENA] ¢þ
>WENV180636403 OCRF01004083 [OCRF] marine metagenome; niskin bottle 980 1056 + Arg TCT [ENA] ¢þ
>WENV180689294 OCZA010720370 [OCZA] marine metagenome; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 42 118 + Arg TCT [ENA] ¢þ
>WENV181322921 OFKV01017366 [OFKV] marine metagenome; sea ice 545 469 - Arg TCT [ENA] ¢þ
>WENV182540626 OJAN01000217 [OJAN] seawater metagenome; Sea water 188 264 + Arg TCT [ENA] ¢þ
>WENV182546270 OJBO01004923 [OJBO] seawater metagenome; Sea water 2420 2344 - Arg TCT [ENA] ¢þ
>WENV182546695 OJBP01001151 [OJBP] seawater metagenome; Sea water 3765 3689 - Arg TCT [ENA] ¢þ
>WENV182547851 OJBU01000401 [OJBU] seawater metagenome; Sea water 8301 8225 - Arg TCT [ENA] ¢þ
>WENV182559744 OJDQ01002549 [OJDQ] seawater metagenome; Sea water 1278 1354 + Arg TCT [ENA] ¢þ
>WENV182560512 OJDU01003609 [OJDU] seawater metagenome; Sea water 921 845 - Arg TCT [ENA] ¢þ
>WENV182563779 OJED01000026 [OJED] seawater metagenome; Sea water 40876 40952 + Arg TCT [ENA] ¢þ
>WENV182581728 OJGY01000561 [OJGY] seawater metagenome; Sea water 188 264 + Arg TCT [ENA] ¢þ
>WENV182581855 OJGZ01000142 [OJGZ] seawater metagenome; Sea water 19335 19259 - Arg TCT [ENA] ¢þ
>WENV182582695 OJHB01014798 [OJHB] seawater metagenome; Sea water 347 423 + Arg TCT [ENA] ¢þ
>WENV183056085 OLHI01000033 [OLHI] seawater metagenome; Sea water 21652 21576 - Arg TCT [ENA] ¢þ
>WENV183522038 OMOM01000005 [OMOM] seawater metagenome; Sea water 198478 198554 + Arg TCT [ENA] ¢þ
>WENV183699583 OZSS01034440 [OZSS] metagenome; Seawater sample 1344 1420 + Arg TCT [ENA] ¢þ
>WENV183746787 PPCM01000008 [PPCM] marine sediment metagenome; marine sediment 709331 709407 + Arg TCT [ENA] ¢þ
>WENV170013988 AVFP01001233 [AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh 177 101 - Arg TCT [ENA] ¢þ
>WENV170014652 AYSL01002917 [AYSL] marine sediment metagenome; marine sediment samples in the proximity of a phosphate-oil terminal 335 259 - Arg TCT [ENA] ¢þ
>WENV170014662 AYSL01003409 [AYSL] marine sediment metagenome; marine sediment samples in the proximity of a phosphate-oil terminal 1687 1763 + Arg TCT [ENA] ¢þ
>WENV170015700 AZII01003518 [AZII] marine sediment metagenome; enrichment culture of sample MGS-BIZ(AMM) from oil contaminated site at the Bizerte 310 386 + Arg TCT [ENA] ¢þ
>WENV170016112 AZIJ01012895 [AZIJ] marine sediment metagenome; enrichment culture of sample MGS-ElMAX(UA) from oil contaminated site at the El-Max 26108 26032 - Arg TCT [ENA] ¢þ
>WENV170200295 CEPM01075620 [CEPM] marine metagenome genome assembly TARA_038_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 210 134 - Arg TCT [ENA] ¢þ
>WENV170202967 CEPS01015403 [CEPS] marine metagenome genome assembly TARA_038_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 208 132 - Arg TCT [ENA] ¢þ
>WENV170223739 CEQE01002392 [CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2067 2143 + Arg TCT [ENA] ¢þ
>WENV170281157 CERS01023259 [CERS] marine metagenome genome assembly TARA_068_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2159 2235 + Arg TCT [ENA] ¢þ
>WENV170284159 CERV01023308 [CERV] marine metagenome genome assembly TARA_068_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 205 129 - Arg TCT [ENA] ¢þ
>WENV170369629 CETR01021039 [CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 409 485 + Arg TCT [ENA] ¢þ
>WENV170378394 CETV01017001 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1110 1186 + Arg TCT [ENA] ¢þ
>WENV170482789 CEVM01059567 [CEVM] marine metagenome genome assembly TARA_145_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 81 5 - Arg TCT [ENA] ¢þ
>WENV170491832 CEVQ01099533 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 210 134 - Arg TCT [ENA] ¢þ
>WENV170594537 FUFK011351211 [FUFK] metagenome; unknown 103 179 + Arg TCT [ENA] ¢þ
>WENV170597987 FUWD010022021 [FUWD] metagenome; unknown 163 239 + Arg TCT [ENA] ¢þ
>WENV170615825 FUWD012869583 [FUWD] metagenome; unknown 140 216 + Arg TCT [ENA] ¢þ
>WENV170646754 JQIA01002728 [JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead 1 77 + Arg TCT [ENA] ¢þ
>WENV170664355 JYMV01015662 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 6823 6899 + Arg TCT [ENA] ¢þ
>WENV170667417 JYMV01047263 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 40796 40720 - Arg TCT [ENA] ¢þ
>W141451822 JFBK01000001 Gammaproteobacteria Alteromonas sp. ALT199 [JFBK] 2432310 2432234 - Arg TCT [ENA] ¡û
>WENV170745112 LULX01041072 [LULX] marine metagenome; Red Sea water column Station 91 - depth 500m 165 89 - Arg TCT [ENA] ¢þ
>WENV170748818 LUME01002457 [LUME] marine metagenome; Red Sea water column Station 34 - depth 200m 2798 2874 + Arg TCT [ENA] ¢þ
>WENV170749916 LUMF01019205 [LUMF] marine metagenome; Red Sea water column Station 34 - depth 100m 514 590 + Arg TCT [ENA] ¢þ
>WENV170751492 LUMI01001635 [LUMI] marine metagenome; Red Sea water column Station 34 - depth 10m 5561 5485 - Arg TCT [ENA] ¢þ
>WENV170758665 LUMR01013920 [LUMR] marine metagenome; Red Sea water column Station 12 - depth 10m 635 711 + Arg TCT [ENA] ¢þ
>WENV170783310 MAAC01015739 [MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days 22954 23030 + Arg TCT [ENA] ¢þ
>WENV170818974 MDSX01083135 [MDSX] marine metagenome; seawater 225 149 - Arg TCT [ENA] ¢þ
>WENV170858883 MDTB01028585 [MDTB] marine metagenome; seawater 4649 4573 - Arg TCT [ENA] ¢þ
>WENV170864654 MDTB01108634 [MDTB] marine metagenome; seawater 9968 10044 + Arg TCT [ENA] ¢þ
>WENV170865467 MDTB01119610 [MDTB] marine metagenome; seawater 25371 25295 - Arg TCT [ENA] ¢þ
>WENV170866814 MDTB01137653 [MDTB] marine metagenome; seawater 51814 51890 + Arg TCT [ENA] ¢þ
>WENV170870355 MDTB01190884 [MDTB] marine metagenome; seawater 54340 54416 + Arg TCT [ENA] ¢þ
>WENV170873206 MDTB01228966 [MDTB] marine metagenome; seawater 3 79 + Arg TCT [ENA] ¢þ
>WENV170892440 MDTD01038273 [MDTD] marine metagenome; seawater 13986 14062 + Arg TCT [ENA] ¢þ
>WENV170898569 MDTD01128095 [MDTD] marine metagenome; seawater 10475 10399 - Arg TCT [ENA] ¢þ
>WENV170941333 MDTG01358624 [MDTG] marine metagenome; seawater 2675 2599 - Arg TCT [ENA] ¢þ
>WENV170943866 MDTG01405028 [MDTG] marine metagenome; seawater 456 380 - Arg TCT [ENA] ¢þ
>C181031507 CP018321 Gammaproteobacteria Alteromonas macleodii Te101 [CP018321] 3047951 3047875 - Arg TCT - ¡û
>C181113254 CP025115 Gammaproteobacteria Alteromonas sp. MB-3u-76 [CP025115] 2979857 2979781 - Arg TCT - ¡û
>C181177239 CP029347 Gammaproteobacteria Saliniradius amylolyticus HMF8227 [CP029347] 2266885 2266809 - Arg TCT - ¡û
>C191083615 CP031967 Gammaproteobacteria Alteromonas sp. BL110 [CP031967] 3261523 3261599 + Arg TCT - ¡û
>C191152353 CP036536 Gammaproteobacteria Salinimonas lutimaris DPSR-4 [CP036536] 1405948 1406024 + Arg TCT - ¡û
>C191172220 CP039852 Gammaproteobacteria Salinimonas iocasae KX18D6 [CP039852] 1292028 1292104 + Arg TCT - ¡û
>C191187441 CP041169 Gammaproteobacteria Alteromonas mediterranea PT11 [CP041169] 2831741 2831665 - Arg TCT - ¡û
>C191187505 CP041170 Gammaproteobacteria Alteromonas mediterranea PT15 [CP041170] 2761880 2761804 - Arg TCT - ¡û
>W09100559 AABI03000002 Gammaproteobacteria Saccharophagus degradans 2-40 [AABI] 94311 94387 + Arg TCT [ENA] ¡û
>W09107872 ABQB01000397 Gammaproteobacteria Alteromonas macleodii ATCC 27126 [ABQB] 166 90 - Arg TCT [ENA] ¡û
>W141814263 JQFW01000028 Gammaproteobacteria Alteromonas sp. LOR [JQFW] 9789 9865 + Arg TCT [ENA] ¡û
>W141814838 JQHG01000030 Gammaproteobacteria Alteromonas sp. LTR [JQHG] 9789 9865 + Arg TCT [ENA] ¡û
>C09100552 CP001103 Gammaproteobacteria Alteromonas mediterranea DE [CP001103] 3208608 3208532 - Arg TCT [Ensembl] ¡û
>W1910179928 BJKJ01000027 Gammaproteobacteria Alteromonas sp. KUL17 [BJKJ] 53317 53393 + Arg TCT [ENA] ¡û
>W1910179941 BJKK01000001 Gammaproteobacteria Alteromonas sp. KUL42 [BJKK] 554483 554559 + Arg TCT [ENA] ¡û
>W1910584154 JXSY01000005 Gammaproteobacteria Bowmanella sp. JS7-9 [JXSY] 282164 282088 - Arg TCT [ENA] ¡û
>W1910930918 NISX01000004 Gammaproteobacteria Lacimicrobium alkaliphilum X13M-12 [NISX] 93775 93699 - Arg TCT [ENA] ¡û
>W1810069882 PEBU01000006 Gammaproteobacteria Bowmanella denitrificans JL63 [PEBU] 102340 102416 + Arg TCT [ENA] ¡û
>W1810357357 PVNO01000026 Gammaproteobacteria Alteromonas gracilis 9a2 [PVNO] 235345 235421 + Arg TCT [ENA] ¡û
>W1810475375 QAIY01003553 Gammaproteobacteria Pseudomonas sp. HMWF031 [QAIY] 953 1029 + Arg TCT [ENA] ¡û
>W1810658754 QJJN01000008 Gammaproteobacteria Alteromonas sp. I10 [QJJN] 103820 103744 - Arg TCT [ENA] ¡û
>C151038467 CP008849 Gammaproteobacteria Alteromonas australica H 17 [CP008849] 2836078 2836002 - Arg TCT [Ensembl] ¡û
>C151074328 CP010912 Gammaproteobacteria Alteromonas australica DE170 [CP010912] 2932129 2932053 - Arg TCT [Ensembl] ¡û
>W1511483520 JWLW01000005 Gammaproteobacteria Alteromonas marina AD001 [JWLW] 9752 9828 + Arg TCT [ENA] ¡û
>W1511483610 JWLX01000031 Gammaproteobacteria Alteromonas macleodii AD006 [JWLX] 103774 103698 - Arg TCT [ENA] ¡û
>W1511483643 JWLY01000005 Gammaproteobacteria Alteromonas macleodii AD037 [JWLY] 177094 177170 + Arg TCT [ENA] ¡û
>W1511510415 JXRW01000058 Gammaproteobacteria Alteromonas macleodii MIT1002 [JXRW] 538 462 - Arg TCT [ENA] ¡û
>WENV055364 AACY023222905 Marine microbial communities from Global Ocean Sampling (GOS) 455 377 - Arg TCT [ENA]
>C161040565 CP012202 Gammaproteobacteria Alteromonas macleodii HOT1A3 [CP012202] 3066387 3066311 - Arg TCT - ¡û
>C161058103 CP013650 Gammaproteobacteria Lacimicrobium alkaliphilum YelD216 [CP013650] 1259043 1259119 + Arg TCT [Ensembl] ¡û
>C161062133 CP013928 Gammaproteobacteria Alteromonas mediterranea UM8 [CP013928] 3043531 3043455 - Arg TCT - ¡û
>C161062192 CP013930 Gammaproteobacteria Alteromonas mediterranea U10 [CP013930] 3048283 3048207 - Arg TCT - ¡û
>C161071129 CP014323 Gammaproteobacteria Alteromonas macleodii D7 [CP014323] 3076825 3076749 - Arg TCT [Ensembl] ¡û
>C131007890 CP003841 Gammaproteobacteria Alteromonas macleodii ATCC 27126 [CP003841] 2963775 2963699 - Arg TCT [Ensembl] ¡û
>C131007942 CP003844 Gammaproteobacteria Alteromonas macleodii str. 'English Channel 673' [CP003844] 3045490 3045414 - Arg TCT [Ensembl] ¡û
>C131008013 CP003845 Gammaproteobacteria Alteromonas macleodii str. 'Black Sea 11' [CP003845] 2983516 2983440 - Arg TCT [Ensembl] ¡û
>C131008736 CP003873 Gammaproteobacteria Alteromonas macleodii str. 'Balearic Sea AD45' [CP003873] 3097207 3097131 - Arg TCT [Ensembl] ¡û
>C131009767 CP003917 Gammaproteobacteria Alteromonas mediterranea DE1 AltDE1 [CP003917] 3070184 3070108 - Arg TCT [Ensembl] ¡û
>C131014162 CP004846 Gammaproteobacteria Alteromonas mediterranea 615 English Channel 615 [CP004846] 2869394 2869318 - Arg TCT [Ensembl] ¡û
>C131014231 CP004848 Gammaproteobacteria Alteromonas mediterranea MED64 [CP004848] 2902977 2902901 - Arg TCT [Ensembl] ¡û
>C131014278 CP004849 Gammaproteobacteria Alteromonas mediterranea U4 Ionian Sea U4 [CP004849] 2886970 2886894 - Arg TCT [Ensembl] ¡û
>C131014285 CP004849 Gammaproteobacteria Alteromonas mediterranea U4 Ionian Sea U4 [CP004849] 2299362 2299286 - Arg TCT [Ensembl] ¡û
>C131014336 CP004851 Gammaproteobacteria Alteromonas mediterranea U7 [CP004851] 3011228 3011152 - Arg TCT [Ensembl] ¡û
>C131014395 CP004852 Gammaproteobacteria Alteromonas mediterranea U8 [CP004852] 2985114 2985038 - Arg TCT [Ensembl] ¡û
>C131014450 CP004853 Gammaproteobacteria Alteromonas mediterranea UM7 [CP004853] 3056287 3056211 - Arg TCT [Ensembl] ¡û
>C131014510 CP004855 Gammaproteobacteria Alteromonas mediterranea UM4b [CP004855] 2991805 2991729 - Arg TCT [Ensembl] ¡û
>C131014523 CP004855 Gammaproteobacteria Alteromonas mediterranea UM4b [CP004855] 1730669 1730593 - Arg TCT [Ensembl] ¡û
>W1610917197 LSMP01000171 Gammaproteobacteria Alteromonas sp. Nap_26 [LSMP] 12005 12081 + Arg TCT [ENA] ¡û
>W1610936525 LUNL01000150 Gammaproteobacteria Alteromonas macleodii [LUNL] 5561 5485 - Arg TCT [ENA] ¡û
>W1610936572 LUNN01000343 Gammaproteobacteria Alteromonas macleodii [LUNN] 2798 2874 + Arg TCT [ENA] ¡û
>W1611011993 LXWE01000013 Gammaproteobacteria Alteromonadaceae bacterium XY-R5 [LXWE] 13093 13017 - Arg TCT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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