This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.279877 (22 seq.)
>W1711120165
LUFS01000087
Alphaproteobacteria
Ehrlichia ruminantium [LUFS]
6892
6819
-
Val
TAC
[ENA]
¡û
>W1711662361
MQUJ01000007
Alphaproteobacteria
Ehrlichia ruminantium [MQUJ]
308804
308731
-
Val
TAC
[ENA]
¡û
>W1711666934
MRDC01000007
Alphaproteobacteria
Ehrlichia ruminantium [MRDC]
308800
308727
-
Val
TAC
[ENA]
¡û
>C008201
CP000107
Alphaproteobacteria
Ehrlichia canis str. Jake [CP000107]
958763
958691
-
Val
TAC
[Ensembl]
¡û
>C009256
CR925677
Alphaproteobacteria
Ehrlichia ruminantium str. Gardel [CR925677]
1107879
1107807
-
Val
TAC
[Ensembl]
¡û
>C009290
CR767821
Alphaproteobacteria
Ehrlichia ruminantium str. Welgevonden [CR767821]
1139315
1139243
-
Val
TAC
[Ensembl]
¡û
>C009326
CR925678
Alphaproteobacteria
Ehrlichia ruminantium str. Welgevonden [CR925678]
1117913
1117841
-
Val
TAC
[Ensembl]
¡û
>WENV170715599
LQAB01007124
[LQAB] termite gut metagenome; bacterial endosymbionts found in Trichonympha flagellates filtered from termite gut
659
587
-
Val
TAC
[ENA]
¢þ
>W09101333
AAEJ01000001
Alphaproteobacteria
Ehrlichia canis str. Jake [AAEJ]
331105
331032
-
Val
TAC
[ENA]
¡û
>C181122115
CP025749
Alphaproteobacteria
Ehrlichia canis YZ-1 [CP025749]
373904
373977
+
Val
TAC
-
¡û
>W1911702654
QOHL01000004
Alphaproteobacteria
Ehrlichia minasensis B11 [QOHL]
54509
54582
+
Val
TAC
[ENA]
¡û
>W1510071298
CDGH01000050
Alphaproteobacteria
Ehrlichia minasensis UFMG-EV [CDGH]
14421
14348
-
Val
TAC
[ENA]
¡û
>W1511574494
LANX01000001
Alphaproteobacteria
Candidatus Neoehrlichia lotoris lotoris str. RAC413 [LANX]
638797
638722
-
Val
TAC
[ENA]
¡û
>W1610081353
BDDK01000029
Alphaproteobacteria
Ehrlichia ruminantium [BDDK]
110760
110687
-
Val
TAC
[ENA]
¡û
>W1610081393
BDDL01000087
Alphaproteobacteria
Ehrlichia ruminantium [BDDL]
11554
11481
-
Val
TAC
[ENA]
¡û
>W1610081428
BDDM01000285
Alphaproteobacteria
Ehrlichia ruminantium [BDDM]
522
449
-
Val
TAC
[ENA]
¡û
>W1610081464
BDDN01000130
Alphaproteobacteria
Ehrlichia ruminantium [BDDN]
11556
11483
-
Val
TAC
[ENA]
¡û
>W1610931481
LUFS01000087
Alphaproteobacteria
Ehrlichia ruminantium [LUFS]
6892
6819
-
Val
TAC
[ENA]
¡û
>W1710080004
BDDK01000029
Alphaproteobacteria
Ehrlichia ruminantium [BDDK]
110760
110687
-
Val
TAC
[ENA]
¡û
>W1710080044
BDDL01000087
Alphaproteobacteria
Ehrlichia ruminantium [BDDL]
11554
11481
-
Val
TAC
[ENA]
¡û
>W1710080079
BDDM01000285
Alphaproteobacteria
Ehrlichia ruminantium [BDDM]
522
449
-
Val
TAC
[ENA]
¡û
>W1710080115
BDDN01000130
Alphaproteobacteria
Ehrlichia ruminantium [BDDN]
11556
11483
-
Val
TAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK