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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.280876 (220 seq.)
>W1710806384
LKAX01000007
Gammaproteobacteria
Pseudomonas sp. ADP [LKAX]
2595650
2595725
+
Thr
GGT
[ENA]
¡û
>W1710813390
LKJO01000040
Gammaproteobacteria
Pseudomonas citronellolis [LKJO]
3759
3834
+
Thr
GGT
[ENA]
¡û
>W1710815534
LKKJ01000030
Gammaproteobacteria
Pseudomonas sp. TTU2014-066ASC [LKKJ]
3132
3207
+
Thr
GGT
[ENA]
¡û
>W1710815642
LKKL01000023
Gammaproteobacteria
Pseudomonas sp. TTU2014-096BSC [LKKL]
3534
3609
+
Thr
GGT
[ENA]
¡û
>W1710815747
LKKN01000065
Gammaproteobacteria
Pseudomonas citronellolis [LKKN]
59701
59626
-
Thr
GGT
[ENA]
¡û
>W1710838822
LLML01000094
Gammaproteobacteria
Pseudomonas aeruginosa [LLML]
1350
1275
-
Thr
GGT
[ENA]
¡û
>W1710850118
LLUD01000037
Gammaproteobacteria
Pseudomonas aeruginosa [LLUD]
777
702
-
Thr
GGT
[ENA]
¡û
>W1710854608
LLXP01000003
Gammaproteobacteria
Pseudomonas chengduensis alcaliphila [LLXP]
369623
369548
-
Thr
GGT
[ENA]
¡û
>W1710872550
LMMB01000031
Gammaproteobacteria
Pseudomonas sp. Leaf83 [LMMB]
268
193
-
Thr
GGT
[ENA]
¡û
>W1711101729
LTNB01000839
Gammaproteobacteria
Pseudomonas sp. HMSC75E02 [LTNB]
2847
2922
+
Thr
GGT
[ENA]
¡û
>W1711212872
LXJQ01000109
Gammaproteobacteria
Pseudomonas sp. 1D4 [LXJQ]
169
94
-
Thr
GGT
[ENA]
¡û
>W1711268739
LZDG02000037
Gammaproteobacteria
Pseudomonas sp. AU11447 [LZDG]
258
183
-
Thr
GGT
[ENA]
¡û
>W1711292867
LZYC01000044
Gammaproteobacteria
Pseudomonas sp. EGD-AKN5 [LZYC]
246
171
-
Thr
GGT
[ENA]
¡û
>W1711295491
MACM02000120
Gammaproteobacteria
Pseudomonas sp. AU12215 [MACM]
16782
16707
-
Thr
GGT
[ENA]
¡û
>W1711353343
MDEM01000015
Gammaproteobacteria
Stutzerimonas xanthomarina [MDEM]
246
171
-
Thr
GGT
[ENA]
¡û
>W1711421616
MHZH01000016
Gammaproteobacteria
Pseudomonadales bacterium GWC1_66_9 [MHZH]
7106
7181
+
Thr
GGT
[ENA]
¡û
>W1711658212
MQMM01000004
Gammaproteobacteria
Stutzerimonas degradans stutzeri [MQMM]
246
171
-
Thr
GGT
[ENA]
¡û
>W1711680604
MRWM01001106
Gammaproteobacteria
Pseudomonas sp. BIN4 [MRWM]
1356
1281
-
Thr
GGT
[ENA]
¡û
>W1711744384
MUHV01000004
Gammaproteobacteria
Pseudomonas sp. T [MUHV]
2901
2976
+
Thr
GGT
[ENA]
¡û
>W1711945859
NBMS01000089
Gammaproteobacteria
Pseudomonas sp. A46 [NBMS]
242
167
-
Thr
GGT
[ENA]
¡û
>W1712105956
NIUB01000005
Gammaproteobacteria
Pseudomonas oleovorans subsp. oleovorans [NIUB]
169012
168937
-
Thr
GGT
[ENA]
¡û
>W1712108215
NJBA01000013
Gammaproteobacteria
Pseudomonas nitroreducens [NJBA]
94275
94200
-
Thr
GGT
[ENA]
¡û
>W1712108232
NJBA01000193
Gammaproteobacteria
Pseudomonas nitroreducens [NJBA]
2970
3045
+
Thr
GGT
[ENA]
¡û
>C171044783
CP015992
Gammaproteobacteria
Pseudomonas sp. TCU-HL1 [CP015992]
759685
759760
+
Thr
GGT
-
¡û
>C171046186
CP016162
Gammaproteobacteria
Pseudomonas alcaliphila JAB1 [CP016162]
4544742
4544667
-
Thr
GGT
-
¡û
>C171060163
CP017290
Gammaproteobacteria
Pseudomonas sp. LPH1 [CP017290]
455278
455353
+
Thr
GGT
-
¡û
>W131046498
AMSL01000124
Gammaproteobacteria
Stutzerimonas degradans Chol1 [AMSL]
193
118
-
Thr
GGT
[ENA]
¡û
>W131052563
AMZB01000020
Gammaproteobacteria
Pseudomonas nitroreducens TX1 [AMZB]
225
150
-
Thr
GGT
[ENA]
¡û
>W131058992
ANGB01000002
Gammaproteobacteria
Pseudomonas chengduensis 34 [ANGB]
407265
407190
-
Thr
GGT
[ENA]
¡û
>W131061425
ANIR01000003
Gammaproteobacteria
Pseudomonas sp. M1 [ANIR]
1210028
1210103
+
Thr
GGT
[ENA]
¡û
>W131155980
AQPA01000062
Gammaproteobacteria
Pseudomonas thermotolerans DSM 14292 [AQPA]
98333
98258
-
Thr
GGT
[ENA]
¡û
>W131210532
ATKM01000019
Gammaproteobacteria
Pseudomonas sp. P818 [ATKM]
680897
680822
-
Thr
GGT
[ENA]
¡û
>W131225713
AUDU01000046
Gammaproteobacteria
Stutzerimonas azotifigens DSM 17556 [AUDU]
75004
74929
-
Thr
GGT
[ENA]
¡û
>W131231123
AUIE01000055
Gammaproteobacteria
Pseudomonas resinovorans DSM 21078 [AUIE]
273
198
-
Thr
GGT
[ENA]
¡û
>W131181471
AROI01000028
Gammaproteobacteria
Halopseudomonas pelagia CL-AP6 [AROI]
209
134
-
Thr
GGT
[ENA]
¡û
>C017192
CP000680
Gammaproteobacteria
Pseudomonas mendocina [CP000680]
4305015
4304940
-
Thr
GGT
[Ensembl]
¡û
>WENV180357145
OBNM01033414
[OBNM] marine metagenome; none
162
237
+
Thr
GGT
[ENA]
¢þ
>W141104362
AVOF01000337
Gammaproteobacteria
Pseudomonas sp. EGD-AK9 [AVOF]
521
446
-
Thr
GGT
[ENA]
¡û
>W141106887
AVQF01000009
Gammaproteobacteria
Pseudomonas chengduensis EGD-AQ5 [AVQF]
2943
3018
+
Thr
GGT
[ENA]
¡û
>W141143690
AWSQ01000010
Gammaproteobacteria
Pseudomonas taeanensis MS-3 [AWSQ]
181682
181607
-
Thr
GGT
[ENA]
¡û
>WENV181732061
OGQD01009178
[OGQD] human gut metagenome; faeces
2930
3005
+
Thr
GGT
[ENA]
¢þ
>WENV181837324
OGVK01021257
[OGVK] freshwater metagenome; freshwater
159
234
+
Thr
GGT
[ENA]
¢þ
>W141213266
AZRU01000154
Gammaproteobacteria
Pseudomonas nitroreducens HBP1 [AZRU]
2803
2878
+
Thr
GGT
[ENA]
¡û
>W141216354
AZUT01000055
Gammaproteobacteria
Pseudomonas thermotolerans J53 [AZUT]
2966
3041
+
Thr
GGT
[ENA]
¡û
>W141230783
BATI01000043
Gammaproteobacteria
Pseudomonas alcaligenes NBRC 14159 [BATI]
35348
35273
-
Thr
GGT
[ENA]
¡û
>WENV182409891
OIFJ01001720
[OIFJ] human gut metagenome; stool
507
582
+
Thr
GGT
[ENA]
¢þ
>W141242349
CAIG01000018
Gammaproteobacteria
Pseudomonas oleovorans CECT 5344 [CAIG]
183415
183340
-
Thr
GGT
[ENA]
¡û
>WENV182540747
OJAP01002845
[OJAP] seawater metagenome; Sea water
79
154
+
Thr
GGT
[ENA]
¢þ
>WENV182551755
OJCH01004451
[OJCH] seawater metagenome; Sea water
494
419
-
Thr
GGT
[ENA]
¢þ
>WENV182552747
OJCO01003935
[OJCO] seawater metagenome; Sea water
80
155
+
Thr
GGT
[ENA]
¢þ
>WENV182571172
OJFG01000874
[OJFG] seawater metagenome; Sea water
1203
1128
-
Thr
GGT
[ENA]
¢þ
>WENV182588248
OJHQ01000112
[OJHQ] seawater metagenome; Sea water
2480
2405
-
Thr
GGT
[ENA]
¢þ
>WENV183057611
OLHL01019210
[OLHL] seawater metagenome; Sea water
80
155
+
Thr
GGT
[ENA]
¢þ
>W141319185
JBOY01000132
Gammaproteobacteria
Pseudomonas sp. RL [JBOY]
212
137
-
Thr
GGT
[ENA]
¡û
>WENV183743485
PJUJ01002113
[PJUJ] feces metagenome; Chicken feces enriched on filter paper: beechwood xylan treatment
2978
3053
+
Thr
GGT
[ENA]
¢þ
>WENV183744207
PJUK01001869
[PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment
3031
3106
+
Thr
GGT
[ENA]
¢þ
>WENV183745134
PJUL01002911
[PJUL] feces metagenome; Chicken feces enriched on filter paper
2978
3053
+
Thr
GGT
[ENA]
¢þ
>WENV170000065
AERA01004508
[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
383
308
-
Thr
GGT
[ENA]
¢þ
>WENV170673316
LAZR01011241
[LAZR] marine sediment metagenome; Loki non-amplified sample from Loki's castle hydrothermal vent sediment
255
180
-
Thr
GGT
[ENA]
¢þ
>WENV170688181
LFRM01232449
[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
3204
3129
-
Thr
GGT
[ENA]
¢þ
>WENV170705548
LNAO01002142
[LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
450
375
-
Thr
GGT
[ENA]
¢þ
>WENV170705558
LNAO01002496
[LNAO] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
1604
1529
-
Thr
GGT
[ENA]
¢þ
>WENV170707605
LNAP01026941
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
2891
2966
+
Thr
GGT
[ENA]
¢þ
>WENV170707710
LNAP01030664
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
1072
997
-
Thr
GGT
[ENA]
¢þ
>WENV170708224
LNAP01060304
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
1083
1008
-
Thr
GGT
[ENA]
¢þ
>WENV170779655
LZQQ01000980
[LZQQ] oil field metagenome; sample BH-FW-20 from oil reservoir
3118
3193
+
Thr
GGT
[ENA]
¢þ
>WENV170965457
MTEU01002665
[MTEU] soil metagenome; naturally attenuated soil
1184
1109
-
Thr
GGT
[ENA]
¢þ
>C181000714
AP014862
Gammaproteobacteria
Pseudomonas furukawaii KF707 [AP014862]
604167
604242
+
Thr
GGT
-
¡û
>C181011100
CP011835
Gammaproteobacteria
Azotobacter chroococcum B3 [CP011835]
3979431
3979356
-
Thr
GGT
-
¡û
>C181087978
CP023641
Gammaproteobacteria
Pseudomonas mendocina MAE1-K [CP023641]
1026635
1026710
+
Thr
GGT
-
¡û
>C181112143
CP025049
Gammaproteobacteria
Pseudomonas aeruginosa PB369 [CP025049]
739572
739647
+
Thr
GGT
-
¡û
>C181112205
CP025050
Gammaproteobacteria
Pseudomonas aeruginosa PB368 [CP025050]
739560
739635
+
Thr
GGT
-
¡û
>W09106303
AAUL01000001
Gammaproteobacteria
Pseudomonas mendocina ymp [AAUL]
519264
519189
-
Thr
GGT
[ENA]
¡û
>C181202685
CP031606
Gammaproteobacteria
Pseudomonas sp. phDV1 [CP031606]
4069332
4069257
-
Thr
GGT
-
¡û
>C191044698
CP026511
Gammaproteobacteria
Pseudomonadaceae bacterium SI-3 [CP026511]
654126
654201
+
Thr
GGT
-
¡û
>C191091981
CP032616
Gammaproteobacteria
Pseudomonas sp. DY-1 [CP032616]
3584147
3584072
-
Thr
GGT
-
¡û
>C191177726
CP040460
Gammaproteobacteria
Stutzerimonas degradans PheN2 [CP040460]
3724494
3724569
+
Thr
GGT
-
¡û
>W141727381
JNCW01000028
Gammaproteobacteria
Pseudomonas sp. AAC [JNCW]
3128
3203
+
Thr
GGT
[ENA]
¡û
>W141727787
JNFN01000068
Gammaproteobacteria
Pseudomonas nitroreducens [JNFN]
238
163
-
Thr
GGT
[ENA]
¡û
>W141727835
JNFO01000136
Gammaproteobacteria
Pseudomonas nitroreducens [JNFO]
1349
1274
-
Thr
GGT
[ENA]
¡û
>W141809681
JPRQ01000058
Gammaproteobacteria
Pseudomonas sp. 1-7 [JPRQ]
2987
3062
+
Thr
GGT
[ENA]
¡û
>W1910296287
FRMS01000042
Gammaproteobacteria
Pseudomonas aeruginosa [FRMS]
2909
2984
+
Thr
GGT
[ENA]
¡û
>W1910299443
FROW01000079
Gammaproteobacteria
Pseudomonas aeruginosa [FROW]
2897
2972
+
Thr
GGT
[ENA]
¡û
>W1910299494
FROX01000075
Gammaproteobacteria
Pseudomonas aeruginosa [FROX]
240
165
-
Thr
GGT
[ENA]
¡û
>W1910299555
FROY01000081
Gammaproteobacteria
Pseudomonas aeruginosa [FROY]
2887
2962
+
Thr
GGT
[ENA]
¡û
>W1910299602
FROZ01000109
Gammaproteobacteria
Pseudomonas aeruginosa [FROZ]
2905
2980
+
Thr
GGT
[ENA]
¡û
>W1910299657
FRPA01000073
Gammaproteobacteria
Pseudomonas aeruginosa [FRPA]
2899
2974
+
Thr
GGT
[ENA]
¡û
>W1910299723
FRPB01000113
Gammaproteobacteria
Pseudomonas aeruginosa [FRPB]
2893
2968
+
Thr
GGT
[ENA]
¡û
>W1910299760
FRPC01000088
Gammaproteobacteria
Pseudomonas aeruginosa [FRPC]
238
163
-
Thr
GGT
[ENA]
¡û
>W1910299817
FRPD01000098
Gammaproteobacteria
Pseudomonas aeruginosa [FRPD]
2899
2974
+
Thr
GGT
[ENA]
¡û
>W1910299871
FRPE01000078
Gammaproteobacteria
Pseudomonas aeruginosa [FRPE]
244
169
-
Thr
GGT
[ENA]
¡û
>W1910299936
FRPF01000102
Gammaproteobacteria
Pseudomonas aeruginosa [FRPF]
2897
2972
+
Thr
GGT
[ENA]
¡û
>W1910299979
FRPG01000056
Gammaproteobacteria
Pseudomonas aeruginosa [FRPG]
240
165
-
Thr
GGT
[ENA]
¡û
>W1910300003
FRPH01000006
Gammaproteobacteria
Pseudomonas aeruginosa [FRPH]
244
169
-
Thr
GGT
[ENA]
¡û
>W1910300103
FRPI01000086
Gammaproteobacteria
Pseudomonas aeruginosa [FRPI]
246
171
-
Thr
GGT
[ENA]
¡û
>W1910300148
FRPJ01000081
Gammaproteobacteria
Pseudomonas aeruginosa [FRPJ]
2899
2974
+
Thr
GGT
[ENA]
¡û
>W1910304882
FRSQ01000197
Gammaproteobacteria
Pseudomonas aeruginosa [FRSQ]
232
157
-
Thr
GGT
[ENA]
¡û
>W1910548433
FZOM01000014
Gammaproteobacteria
Pseudomonas nitroreducens LMG 21614 [FZOM]
293
218
-
Thr
GGT
[ENA]
¡û
>W1910549237
FZPC01000024
Gammaproteobacteria
Pseudomonas delhiensis RLD-1 [FZPC]
116428
116353
-
Thr
GGT
[ENA]
¡û
>W1910635768
LNJZ01000009
Gammaproteobacteria
Thiopseudomonas denitrificans X2 [LNJZ]
809730
809655
-
Thr
GGT
[ENA]
¡û
>W1910671404
MCMH01000025
Gammaproteobacteria
Pseudomonas aeruginosa [MCMH]
3145
3220
+
Thr
GGT
[ENA]
¡û
>W1910810374
MUJY01000158
Gammaproteobacteria
Pseudomonas sp. PIC25 [MUJY]
270
195
-
Thr
GGT
[ENA]
¡û
>W1910810778
MUNN01000118
Gammaproteobacteria
Pseudomonas indica PIC105 [MUNN]
282
207
-
Thr
GGT
[ENA]
¡û
>W1910928728
NIQV01000039
Gammaproteobacteria
Pseudomonas toyotomiensis DSM 26169 [NIQV]
318
243
-
Thr
GGT
[ENA]
¡û
>W1911246982
NSLB01000024
Gammaproteobacteria
Pseudomonas sp. HAR-UPW-AIA-41 [NSLB]
2919
2994
+
Thr
GGT
[ENA]
¡û
>W1911252999
NSPI01000059
Gammaproteobacteria
Pseudomonas aeruginosa [NSPI]
8675
8750
+
Thr
GGT
[ENA]
¡û
>W1911253448
NSPQ01000047
Gammaproteobacteria
Pseudomonas aeruginosa [NSPQ]
3184
3259
+
Thr
GGT
[ENA]
¡û
>W1911398038
NWMT01000253
Gammaproteobacteria
Halopseudomonas pelagia 58 [NWMT]
256
181
-
Thr
GGT
[ENA]
¡û
>W1911568293
PCQD01000011
Gammaproteobacteria
Pseudomonas sp. MYb185 [PCQD]
109108
109033
-
Thr
GGT
[ENA]
¡û
>W1911586057
PISI01000035
Gammaproteobacteria
Pseudomonas citronellolis DSM 50332 [PISI]
690678
690603
-
Thr
GGT
[ENA]
¡û
>W1911693813
QLYU01000022
Gammaproteobacteria
Pseudomonas sp. MDMC224 [QLYU]
3370
3445
+
Thr
GGT
[ENA]
¡û
>W1911693832
QLYV01000058
Gammaproteobacteria
Pseudomonas sp. MDMC216 [QLYV]
1356
1281
-
Thr
GGT
[ENA]
¡û
>W1911693916
QLYW01000085
Gammaproteobacteria
Pseudomonas sp. MDMC17 [QLYW]
1356
1281
-
Thr
GGT
[ENA]
¡û
>W1911743729
QVNC01000684
Gammaproteobacteria
Pseudomonas sp. ATCC 13867 [QVNC]
384
459
+
Thr
GGT
[ENA]
¡û
>W1810017303
BGPP01000020
Gammaproteobacteria
Pseudomonas citronellolis LA18T [BGPP]
59310
59235
-
Thr
GGT
[ENA]
¡û
>W1810100497
PGLR01000102
Gammaproteobacteria
Pseudomonas sp. ZH-FAD [PGLR]
3246
3321
+
Thr
GGT
[ENA]
¡û
>W1810156386
PJBG01000024
Gammaproteobacteria
Pseudomonas sp. Choline-3u-10 [PJBG]
43834
43759
-
Thr
GGT
[ENA]
¡û
>W1810169358
PJJZ01000001
Gammaproteobacteria
Stutzerimonas stutzeri DSM 50227 [PJJZ]
908497
908422
-
Thr
GGT
[ENA]
¡û
>W1810224438
POUK01000012
Gammaproteobacteria
Stutzerimonas degradans DSM 50238 [POUK]
2928
3003
+
Thr
GGT
[ENA]
¡û
>W1810224487
POUL01000014
Gammaproteobacteria
Stutzerimonas stutzeri 4C29 [POUL]
106859
106784
-
Thr
GGT
[ENA]
¡û
>W1810297037
PTLV01000233
Gammaproteobacteria
Pseudomonas oleovorans YKJ [PTLV]
83490
83415
-
Thr
GGT
[ENA]
¡û
>W1810378787
PXJI01000019
Gammaproteobacteria
Pseudomonas otitidis PAM-1 [PXJI]
3000
3075
+
Thr
GGT
[ENA]
¡û
>W1810484197
QASO01000077
Gammaproteobacteria
Pseudomonas indoloxydans JCM 14246 [QASO]
8196
8271
+
Thr
GGT
[ENA]
¡û
>W1810607810
QGSL01000106
Gammaproteobacteria
Pseudomonas sp. RW407 [QGSL]
709624
709699
+
Thr
GGT
[ENA]
¡û
>W1810670678
QJRX01000008
Gammaproteobacteria
Pseudomonas alcaligenes MB-090714 [QJRX]
3058
3133
+
Thr
GGT
[ENA]
¡û
>W1810722124
QNTV01000039
Gammaproteobacteria
Stutzerimonas zhaodongensis SST2 [QNTV]
984
909
-
Thr
GGT
[ENA]
¡û
>W1810743419
QORI01000455
Gammaproteobacteria
Pseudomonas sp. SST3 [QORI]
2871
2946
+
Thr
GGT
[ENA]
¡û
>W1810899461
QVAU01000044
Gammaproteobacteria
Pseudomonas aeruginosa PABL103 [QVAU]
47812
47737
-
Thr
GGT
[ENA]
¡û
>W1810899945
QVBD01000042
Gammaproteobacteria
Pseudomonas aeruginosa PABL093 [QVBD]
45392
45317
-
Thr
GGT
[ENA]
¡û
>W1810901444
QVCE01000045
Gammaproteobacteria
Pseudomonas aeruginosa PABL065 [QVCE]
41295
41220
-
Thr
GGT
[ENA]
¡û
>C151001244
AP013068
Gammaproteobacteria
Pseudomonas resinovorans NBRC 106553 [AP013068]
645603
645678
+
Thr
GGT
[Ensembl]
¡û
>C151023521
CP007441
Gammaproteobacteria
Stutzerimonas stutzeri 28a24 [CP007441]
670555
670630
+
Thr
GGT
[Ensembl]
¡û
>C151068438
CP010415
Gammaproteobacteria
Azotobacter chroococcum NCIMB 8003 [CP010415]
3914554
3914479
-
Thr
GGT
[Ensembl]
¡û
>C151071269
CP010555
Gammaproteobacteria
Pseudomonas aeruginosa FRD1 [CP010555]
3503782
3503707
-
Thr
GGT
[Ensembl]
¡û
>C151093924
CP012358
Gammaproteobacteria
Thiopseudomonas alkaliphila B4199 [CP012358]
2051954
2052029
+
Thr
GGT
-
¡û
>C151100205
HG322950
Gammaproteobacteria
Pseudomonas knackmussii B13 [HG322950]
649352
649427
+
Thr
GGT
[Ensembl]
¡û
>C151101411
HG916826
Gammaproteobacteria
Pseudomonas oleovorans CECT 5344 CECT5344 [HG916826]
3831630
3831555
-
Thr
GGT
[Ensembl]
¡û
>C151102272
LK391695
Gammaproteobacteria
Pseudomonas oleovorans [LK391695]
3842274
3842199
-
Thr
GGT
[Ensembl]
¡û
>W1510015179
BBQO01000025
Gammaproteobacteria
Pseudomonas toyotomiensis KF710 [BBQO]
3002
3077
+
Thr
GGT
[ENA]
¡û
>W1510015285
BBQQ01000024
Gammaproteobacteria
Stutzerimonas degradans KF716 [BBQQ]
2798
2873
+
Thr
GGT
[ENA]
¡û
>WENV11100423
AERA01004508
[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant
383
308
-
Thr
GGT
[ENA]
¡û
>W1511187095
JMFZ01000024
Gammaproteobacteria
Stutzerimonas degradans HMP271 [JMFZ]
287
212
-
Thr
GGT
[ENA]
¡û
>W1511307136
JPMY01000019
Gammaproteobacteria
Pseudomonas sp. ML96 [JPMY]
234
159
-
Thr
GGT
[ENA]
¡û
>W1511356376
JRUD01000048
Gammaproteobacteria
Pseudomonas flexibilis ATCC 29606 [JRUD]
292
217
-
Thr
GGT
[ENA]
¡û
>W1511393328
JTAK01000014
Gammaproteobacteria
Pseudomonas flexibilis JCM 14085 [JTAK]
3000
3075
+
Thr
GGT
[ENA]
¡û
>W1511399746
JTFL01000126
Gammaproteobacteria
Pseudomonas oleovorans S1 [JTFL]
3145
3220
+
Thr
GGT
[ENA]
¡û
>W1511399749
JTFL01000126
Gammaproteobacteria
Pseudomonas oleovorans S1 [JTFL]
9358
9433
+
Thr
GGT
[ENA]
¡û
>W1511399752
JTFL01000126
Gammaproteobacteria
Pseudomonas oleovorans S1 [JTFL]
15752
15827
+
Thr
GGT
[ENA]
¡û
>W1511404527
JTMF01000091
Gammaproteobacteria
Pseudomonas aeruginosa AZPAE15067 [JTMF]
2866
2941
+
Thr
GGT
[ENA]
¡û
>W1511405410
JTMV01000097
Gammaproteobacteria
Pseudomonas aeruginosa AZPAE15051 [JTMV]
393
318
-
Thr
GGT
[ENA]
¡û
>W1511408717
JTPE01000089
Gammaproteobacteria
Pseudomonas aeruginosa AZPAE14990 [JTPE]
2866
2941
+
Thr
GGT
[ENA]
¡û
>W1511415234
JTTT01000132
Gammaproteobacteria
Pseudomonas aeruginosa AZPAE14869 [JTTT]
2866
2941
+
Thr
GGT
[ENA]
¡û
>W1511422547
JTYY01000071
Gammaproteobacteria
Pseudomonas aeruginosa AZPAE14372 [JTYY]
2869
2944
+
Thr
GGT
[ENA]
¡û
>W1511430160
JUEH01000057
Gammaproteobacteria
Pseudomonas nitroreducens Aramco J [JUEH]
2845
2920
+
Thr
GGT
[ENA]
¡û
>W1511483909
JWMC01000099
Gammaproteobacteria
Pseudomonas sp. PI1 [JWMC]
935
860
-
Thr
GGT
[ENA]
¡û
>W1511490043
JWTL01000043
Gammaproteobacteria
Pseudomonas sp. 10B238 [JWTL]
2804
2879
+
Thr
GGT
[ENA]
¡û
>W1511525058
JYFT01000064
Gammaproteobacteria
Pseudomonas sp. FeS53a [JYFT]
3091
3166
+
Thr
GGT
[ENA]
¡û
>W1511527566
JYHV01000008
Gammaproteobacteria
Stutzerimonas stutzeri NT0128 [JYHV]
2864
2939
+
Thr
GGT
[ENA]
¡û
>W1511530355
JYKO01000012
Gammaproteobacteria
Pseudomonas sp. LFM046 [JYKO]
1210
1135
-
Thr
GGT
[ENA]
¡û
>W1511534537
JYOA01000021
Gammaproteobacteria
Pseudomonas sp. 21 [JYOA]
220
145
-
Thr
GGT
[ENA]
¡û
>C121015361
CP003725
Gammaproteobacteria
Stutzerimonas stutzeri DSM 10701 [CP003725]
3689044
3688969
-
Thr
GGT
[Ensembl]
¡û
>C161000952
AP014655
Gammaproteobacteria
Pseudomonas sp. MT-1 [AP014655]
4495753
4495678
-
Thr
GGT
-
¡û
>C161067322
CP014158
Gammaproteobacteria
Pseudomonas citronellolis P3B5 [CP014158]
801465
801540
+
Thr
GGT
[Ensembl]
¡û
>C161077566
CP014784
Gammaproteobacteria
Pseudomonas alcaligenes NEB 585 [CP014784]
4300038
4299963
-
Thr
GGT
-
¡û
>C161089981
CP015641
Gammaproteobacteria
Stutzerimonas stutzeri 273 [CP015641]
2415989
2416064
+
Thr
GGT
[Ensembl]
¡û
>C161092002
CP015878
Gammaproteobacteria
Pseudomonas citronellolis SJTE-3 [CP015878]
841391
841466
+
Thr
GGT
[Ensembl]
¡û
>W121018220
AGSX01000087
Gammaproteobacteria
Stutzerimonas stutzeri SDM-LAC [AGSX]
2852
2927
+
Thr
GGT
[ENA]
¡û
>W121064864
AJMR01000044
Gammaproteobacteria
Pseudomonas furukawaii KF707 [AJMR]
1327
1252
-
Thr
GGT
[ENA]
¡û
>W121070625
AJXE01000061
Gammaproteobacteria
Stutzerimonas stutzeri TS44 [AJXE]
176
101
-
Thr
GGT
[ENA]
¡û
>W121112416
ALKM01000023
Gammaproteobacteria
Pseudomonas mendocina DLHK [ALKM]
16716
16641
-
Thr
GGT
[ENA]
¡û
>W1610047003
BBCY01000326
Gammaproteobacteria
Pseudomonas flexibilis JCM 14085 [BBCY]
2777
2852
+
Thr
GGT
[ENA]
¡û
>W1610060078
BCBL01000101
Gammaproteobacteria
Pseudomonas sp. NBRC 111135 [BCBL]
24176
24101
-
Thr
GGT
[ENA]
¡û
>C131013273
CP004143
Gammaproteobacteria
Pseudomonas sp. ATCC 13867 [CP004143]
601247
601322
+
Thr
GGT
[Ensembl]
¡û
>W1610670111
LKAX01000007
Gammaproteobacteria
Pseudomonas sp. ADP [LKAX]
2595650
2595725
+
Thr
GGT
[ENA]
¡û
>W1610677487
LKJO01000040
Gammaproteobacteria
Pseudomonas citronellolis [LKJO]
3759
3834
+
Thr
GGT
[ENA]
¡û
>W1610679631
LKKJ01000030
Gammaproteobacteria
Pseudomonas sp. TTU2014-066ASC [LKKJ]
3132
3207
+
Thr
GGT
[ENA]
¡û
>W1610679739
LKKL01000023
Gammaproteobacteria
Pseudomonas sp. TTU2014-096BSC [LKKL]
3534
3609
+
Thr
GGT
[ENA]
¡û
>W1610679844
LKKN01000065
Gammaproteobacteria
Pseudomonas citronellolis [LKKN]
59701
59626
-
Thr
GGT
[ENA]
¡û
>W1610701961
LLML01000094
Gammaproteobacteria
Pseudomonas aeruginosa [LLML]
1350
1275
-
Thr
GGT
[ENA]
¡û
>W1610713257
LLUD01000037
Gammaproteobacteria
Pseudomonas aeruginosa [LLUD]
777
702
-
Thr
GGT
[ENA]
¡û
>W1610713985
LLUQ01000027
Gammaproteobacteria
Pseudomonas aeruginosa [LLUQ]
3098
3173
+
Thr
GGT
[ENA]
¡û
>W1610716885
LLXP01000003
Gammaproteobacteria
Pseudomonas chengduensis alcaliphila [LLXP]
369623
369548
-
Thr
GGT
[ENA]
¡û
>W1610734896
LMMB01000031
Gammaproteobacteria
Pseudomonas sp. Leaf83 [LMMB]
268
193
-
Thr
GGT
[ENA]
¡û
>W1611029551
LZDG02000037
Gammaproteobacteria
Pseudomonas sp. AU11447 [LZDG]
258
183
-
Thr
GGT
[ENA]
¡û
>W1611050083
LZYC01000044
Gammaproteobacteria
Pseudomonas sp. EGD-AKN5 [LZYC]
246
171
-
Thr
GGT
[ENA]
¡û
>W1611050878
MACM02000120
Gammaproteobacteria
Pseudomonas sp. AU12215 [MACM]
16782
16707
-
Thr
GGT
[ENA]
¡û
>W1710043608
BBCY01000326
Gammaproteobacteria
Pseudomonas flexibilis JCM 14085 [BBCY]
2777
2852
+
Thr
GGT
[ENA]
¡û
>W1710057201
BCBL01000101
Gammaproteobacteria
Pseudomonas sp. NBRC 111135 [BCBL]
24176
24101
-
Thr
GGT
[ENA]
¡û
>W1710075563
BCZV01000008
Gammaproteobacteria
Pseudomonas alcaliphila NBRC 102411 [BCZV]
3210
3285
+
Thr
GGT
[ENA]
¡û
>W1710075749
BCZY01000093
Gammaproteobacteria
Pseudomonas citronellolis NBRC 103043 [BCZY]
3348
3423
+
Thr
GGT
[ENA]
¡û
>W1710076018
BDAD01000017
Gammaproteobacteria
Pseudomonas jinjuensis NBRC 103047 [BDAD]
141060
140985
-
Thr
GGT
[ENA]
¡û
>W1710076304
BDAI01000030
Gammaproteobacteria
Pseudomonas nitroreducens NBRC 12694 [BDAI]
200
125
-
Thr
GGT
[ENA]
¡û
>W1710076363
BDAJ01000147
Gammaproteobacteria
Pseudomonas oleovorans NBRC 14167 [BDAJ]
214
139
-
Thr
GGT
[ENA]
¡û
>W1710076477
BDAL01000085
Gammaproteobacteria
Pseudomonas oleovorans subsp. oleovorans NBRC 13583 [BDAL]
3310
3385
+
Thr
GGT
[ENA]
¡û
>W1710082317
BDGS01000001
Gammaproteobacteria
Pseudomonas humi CCA 1 [BDGS]
1358864
1358789
-
Thr
GGT
[ENA]
¡û
>W1710506562
FMUP01000017
Gammaproteobacteria
Pseudomonas flexibilis [FMUP]
253
178
-
Thr
GGT
[ENA]
¡û
>W1710509526
FMXG01000016
Gammaproteobacteria
Pseudomonas sp. NFPP33 [FMXG]
3405
3480
+
Thr
GGT
[ENA]
¡û
>W1710512749
FMZQ01000024
Gammaproteobacteria
Pseudomonas chengduensis [FMZQ]
3330
3405
+
Thr
GGT
[ENA]
¡û
>W1710516717
FNCT01000007
Gammaproteobacteria
Pseudomonas benzenivorans [FNCT]
3036
3111
+
Thr
GGT
[ENA]
¡û
>W1710518022
FNDS01000025
Gammaproteobacteria
Pseudomonas panipatensis [FNDS]
264
189
-
Thr
GGT
[ENA]
¡û
>W1710518587
FNEC01000088
Gammaproteobacteria
Pseudomonas delhiensis [FNEC]
2973
3048
+
Thr
GGT
[ENA]
¡û
>W1710524003
FNIJ01000018
Gammaproteobacteria
Pseudomonas jinjuensis [FNIJ]
124842
124767
-
Thr
GGT
[ENA]
¡û
>W1710525252
FNJJ01000012
Gammaproteobacteria
Pseudomonas guguanensis [FNJJ]
21258
21333
+
Thr
GGT
[ENA]
¡û
>W1710541774
FNYO01000161
Gammaproteobacteria
Azotobacter beijerinckii [FNYO]
3108
3183
+
Thr
GGT
[ENA]
¡û
>W1710541875
FNYQ01000198
Gammaproteobacteria
Azotobacter beijerinckii [FNYQ]
242
167
-
Thr
GGT
[ENA]
¡û
>W1710542406
FNZC01000104
Gammaproteobacteria
Pseudomonas oleovorans [FNZC]
213
138
-
Thr
GGT
[ENA]
¡û
>W1710542510
FNZE01000036
Gammaproteobacteria
Pseudomonas linyingensis [FNZE]
2893
2968
+
Thr
GGT
[ENA]
¡û
>W1710550574
FOFJ01000131
Gammaproteobacteria
Azotobacter beijerinckii [FOFJ]
3070
3145
+
Thr
GGT
[ENA]
¡û
>W1710555626
FOJP01000044
Gammaproteobacteria
Pseudomonas otitidis [FOJP]
273
198
-
Thr
GGT
[ENA]
¡û
>W1710556686
FOKJ01000172
Gammaproteobacteria
Azotobacter beijerinckii [FOKJ]
242
167
-
Thr
GGT
[ENA]
¡û
>W1710558318
FOLS01000068
Gammaproteobacteria
Pseudomonas citronellolis [FOLS]
215
140
-
Thr
GGT
[ENA]
¡û
>W1710567673
FOSX01000180
Gammaproteobacteria
Azotobacter beijerinckii [FOSX]
242
167
-
Thr
GGT
[ENA]
¡û
>W1710569378
FOUI01000016
Gammaproteobacteria
Halopseudomonas yangmingensis [FOUI]
3242
3317
+
Thr
GGT
[ENA]
¡û
>W1710573366
FOXK01000030
Gammaproteobacteria
Pseudomonas toyotomiensis [FOXK]
264
189
-
Thr
GGT
[ENA]
¡û
>W1710573459
FOXM01000013
Gammaproteobacteria
Pseudomonas sagittaria [FOXM]
3099
3174
+
Thr
GGT
[ENA]
¡û
>W1710580252
FPJD01000019
Gammaproteobacteria
Pseudomonas sp. NFACC19-2 [FPJD]
264
189
-
Thr
GGT
[ENA]
¡û
>W1710586238
FQXA01000004
Gammaproteobacteria
Stutzerimonas xanthomarina DSM 18231 [FQXA]
2942
3017
+
Thr
GGT
[ENA]
¡û
>W1710595711
FTMC01000037
Gammaproteobacteria
Pseudomonas flexibilis [FTMC]
253
178
-
Thr
GGT
[ENA]
¡û
>W1710596494
FTMP01000005
Gammaproteobacteria
Pseudomonas alcaligenes [FTMP]
3054
3129
+
Thr
GGT
[ENA]
¡û
>W1710598257
FTNW01000003
Gammaproteobacteria
Pseudomonas alcaligenes [FTNW]
3111
3186
+
Thr
GGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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