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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.280997 (4 seq.)
>W1910701097
MEUZ01000003
Unclassified
candidate division WWE3 bacterium RIFCSPHIGHO2_01_FULL_40_23 [MEUZ]
1729
1805
+
Glu
TTC
[ENA]
¡û
>W1910701431
MEVI01000003
Unclassified
candidate division WWE3 bacterium RIFCSPLOWO2_01_FULL_41_18 [MEVI]
1711
1787
+
Glu
TTC
[ENA]
¡û
>W2010834523
MEUZ01000003
Unclassified
candidate division WWE3 bacterium RIFCSPHIGHO2_01_FULL_40_23 [MEUZ]
1729
1805
+
Glu
TTC
[ENA]
¡û
>W2010834857
MEVI01000003
Unclassified
candidate division WWE3 bacterium RIFCSPLOWO2_01_FULL_41_18 [MEVI]
1711
1787
+
Glu
TTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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