This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.281239 (243 seq.)
>W1711048159
LRPK01000006
Actinomycetota
Alloscardovia omnicolens [LRPK]
2889
2962
+
Lys
TTT
[ENA]
¡û
>W1711082602
LSUJ01000004
Actinomycetota
Bifidobacterium dentium [LSUJ]
44176
44249
+
Lys
TTT
[ENA]
¡û
>W1711111745
LTWS01000046
Actinomycetota
Alloscardovia sp. HMSC034E08 [LTWS]
206
133
-
Lys
TTT
[ENA]
¡û
>W131215515
ATVB01000016
Actinomycetota
Alloscardovia omnicolens DSM 21503 [ATVB]
587
514
-
Lys
TTT
[ENA]
¡û
>W131215660
ATVE01000011
Actinomycetota
Bifidobacterium magnum DSM 20222 [ATVE]
13318
13391
+
Lys
TTT
[ENA]
¡û
>W1711540056
MLZL01000003
Actinomycetota
Bifidobacterium animalis subsp. lactis [MLZL]
47121
47048
-
Lys
TTT
[ENA]
¡û
>W1711937706
NAQE01000001
Actinomycetota
Bifidobacterium dentium [NAQE]
131307
131380
+
Lys
TTT
[ENA]
¡û
>W131217485
ATWW01000005
Actinomycetota
Bifidobacterium pseudolongum AGR2145 [ATWW]
64775
64850
+
Lys
TTT
[ENA]
¡û
>W131223992
AUCL01000011
Actinomycetota
Bifidobacterium tsurumiense DSM 17777 [AUCL]
74549
74622
+
Lys
TTT
[ENA]
¡û
>WENV180122135
OAST01000804
[OAST] human gut metagenome; faeces
2299
2226
-
Lys
TTT
[ENA]
¢þ
>WENV180122394
OASU01000084
[OASU] human gut metagenome; faeces
14577
14650
+
Lys
TTT
[ENA]
¢þ
>WENV180146205
OAUF01000021
[OAUF] human gut metagenome; faeces
129906
129979
+
Lys
TTT
[ENA]
¢þ
>WENV180148999
OAUK01009079
[OAUK] human gut metagenome; faeces
214
287
+
Lys
TTT
[ENA]
¢þ
>WENV180149488
OAUL01001842
[OAUL] human gut metagenome; faeces
2090
2017
-
Lys
TTT
[ENA]
¢þ
>WENV180180860
OAWM01000122
[OAWM] human gut metagenome; faeces
66323
66250
-
Lys
TTT
[ENA]
¢þ
>WENV180181535
OAWN01000016
[OAWN] human gut metagenome; faeces
125032
125105
+
Lys
TTT
[ENA]
¢þ
>WENV180183560
OAWQ01000004
[OAWQ] human gut metagenome; faeces
175293
175220
-
Lys
TTT
[ENA]
¢þ
>WENV180186670
OAWV01000421
[OAWV] human gut metagenome; faeces
7546
7619
+
Lys
TTT
[ENA]
¢þ
>WENV180217771
OBAR01004703
[OBAR] human gut metagenome; human gut
6743
6670
-
Lys
TTT
[ENA]
¢þ
>WENV180277398
OBHX01000061
[OBHX] metagenome; feces
94967
94894
-
Lys
TTT
[ENA]
¢þ
>WENV180332896
OBLF01000025
[OBLF] metagenome; feces
137034
136961
-
Lys
TTT
[ENA]
¢þ
>WENV180334981
OBLF01118352
[OBLF] metagenome; feces
167
94
-
Lys
TTT
[ENA]
¢þ
>WENV180347753
OBLO01001125
[OBLO] metagenome; feces
918
845
-
Lys
TTT
[ENA]
¢þ
>WENV180409760
OBUV01000745
[OBUV] human gut metagenome; faeces
2337
2264
-
Lys
TTT
[ENA]
¢þ
>WENV180410056
OBUW01000602
[OBUW] human gut metagenome; faeces
12554
12481
-
Lys
TTT
[ENA]
¢þ
>WENV180414219
OBVC01006896
[OBVC] human gut metagenome; faeces
1224
1151
-
Lys
TTT
[ENA]
¢þ
>WENV180448210
OBXE01001230
[OBXE] human gut metagenome; faeces
209
282
+
Lys
TTT
[ENA]
¢þ
>WENV180452898
OBXK01001112
[OBXK] human gut metagenome; faeces
2289
2216
-
Lys
TTT
[ENA]
¢þ
>WENV180455351
OBXO01001802
[OBXO] human gut metagenome; faeces
4409
4336
-
Lys
TTT
[ENA]
¢þ
>WENV180458193
OBXV01002463
[OBXV] human gut metagenome; faeces
308
381
+
Lys
TTT
[ENA]
¢þ
>WENV180459620
OBXX01000959
[OBXX] human gut metagenome; faeces
2848
2775
-
Lys
TTT
[ENA]
¢þ
>WENV180495906
OCAC01000098
[OCAC] human gut metagenome; faeces
24113
24186
+
Lys
TTT
[ENA]
¢þ
>WENV180598539
OCPM01006107
[OCPM] human gut metagenome; faeces
538
465
-
Lys
TTT
[ENA]
¢þ
>WENV180598640
OCPN01000007
[OCPN] human gut metagenome; faeces
46415
46488
+
Lys
TTT
[ENA]
¢þ
>WENV180764145
ODIA01020835
[ODIA] human metagenome; G_DNA_Tongue dorsum
584
511
-
Lys
TTT
[ENA]
¢þ
>WENV180855420
ODKX01101309
[ODKX] human metagenome; G_DNA_Tongue dorsum
164
237
+
Lys
TTT
[ENA]
¢þ
>WENV180897652
ODNI01049740
[ODNI] human metagenome; G_DNA_Tongue dorsum
415
488
+
Lys
TTT
[ENA]
¢þ
>WENV180929880
ODTN01022526
[ODTN] human metagenome; G_DNA_Tongue dorsum
439
366
-
Lys
TTT
[ENA]
¢þ
>WENV181096335
OEBY01092289
[OEBY] human metagenome; G_DNA_Tongue dorsum
62
135
+
Lys
TTT
[ENA]
¢þ
>WENV181151656
OEHW01090227
[OEHW] human metagenome; G_DNA_Tongue dorsum
148
75
-
Lys
TTT
[ENA]
¢þ
>WENV181253754
OFFQ01044100
[OFFQ] mouse gut metagenome; faeces
649
575
-
Lys
TTT
[ENA]
¢þ
>WENV181255841
OFFS01044606
[OFFS] mouse gut metagenome; faeces
127
201
+
Lys
TTT
[ENA]
¢þ
>WENV181273929
OFGH01018341
[OFGH] mouse gut metagenome; faeces
1631
1557
-
Lys
TTT
[ENA]
¢þ
>WENV181274929
OFGI01017110
[OFGI] mouse gut metagenome; faeces
971
897
-
Lys
TTT
[ENA]
¢þ
>WENV181327680
OFLR01000001
[OFLR] metagenome; faeces
211273
211200
-
Lys
TTT
[ENA]
¢þ
>WENV181327898
OFLS01000003
[OFLS] metagenome; faeces
239011
238938
-
Lys
TTT
[ENA]
¢þ
>WENV181429524
OGCX01010926
[OGCX] metagenome; Human gut stool
1238
1311
+
Lys
TTT
[ENA]
¢þ
>WENV181434719
OGDF01001344
[OGDF] human gut metagenome; human gut
31646
31573
-
Lys
TTT
[ENA]
¢þ
>WENV181439548
OGDN01000045
[OGDN] human gut metagenome; human gut
137030
136957
-
Lys
TTT
[ENA]
¢þ
>W141143421
AWSI01000002
Actinomycetota
Alloscardovia omnicolens F0580 [AWSI]
2872
2945
+
Lys
TTT
[ENA]
¡û
>WENV181458120
OGEJ01000776
[OGEJ] metagenome; Human gut stool
8714
8641
-
Lys
TTT
[ENA]
¢þ
>WENV181465645
OGEQ01000151
[OGEQ] metagenome; Human gut stool
49759
49686
-
Lys
TTT
[ENA]
¢þ
>WENV181469745
OGEU01000109
[OGEU] metagenome; Human gut stool
84381
84308
-
Lys
TTT
[ENA]
¢þ
>WENV181471909
OGEZ01000019
[OGEZ] metagenome; Human gut stool
64952
65025
+
Lys
TTT
[ENA]
¢þ
>WENV181487906
OGFP01010200
[OGFP] metagenome; Human gut stool
587
514
-
Lys
TTT
[ENA]
¢þ
>WENV181501903
OGGI01002594
[OGGI] metagenome; Human gut stool
4148
4075
-
Lys
TTT
[ENA]
¢þ
>WENV181506122
OGGM01000135
[OGGM] metagenome; Human gut stool
26394
26467
+
Lys
TTT
[ENA]
¢þ
>WENV181510834
OGGR01020327
[OGGR] metagenome; Human gut stool
409
482
+
Lys
TTT
[ENA]
¢þ
>W08006189
ABIX02000002
Actinomycetota
Bifidobacterium dentium ATCC 27678 [ABIX]
626293
626366
+
Lys
TTT
[ENA]
¡û
>W08009146
ABOT01000004
Actinomycetota
Bifidobacterium animalis subsp. lactis HN019 [ABOT]
136975
136902
-
Lys
TTT
[ENA]
¡û
>WENV181536533
OGHW01000071
[OGHW] metagenome; Human gut stool
85121
85194
+
Lys
TTT
[ENA]
¢þ
>WENV181555401
OGIT01002464
[OGIT] metagenome; Human gut stool
2261
2188
-
Lys
TTT
[ENA]
¢þ
>WENV181555973
OGIU01001209
[OGIU] metagenome; Human gut stool
9309
9236
-
Lys
TTT
[ENA]
¢þ
>WENV181560222
OGJC01000005
[OGJC] metagenome; Human gut stool
90640
90713
+
Lys
TTT
[ENA]
¢þ
>WENV181588023
OGKH01000324
[OGKH] metagenome; Human gut stool
11034
10961
-
Lys
TTT
[ENA]
¢þ
>W141169172
AXVO01000018
Actinomycetota
Bifidobacterium choerinum DSM 20434 [AXVO]
21674
21749
+
Lys
TTT
[ENA]
¡û
>WENV181752999
OGQQ01044108
[OGQQ] human gut metagenome; faeces
767
694
-
Lys
TTT
[ENA]
¢þ
>WENV181801514
OGSB01000439
[OGSB] human gut metagenome; fecal sample 5 from infant 3
5931
5858
-
Lys
TTT
[ENA]
¢þ
>WENV181810351
OGSV01000011
[OGSV] human gut metagenome; fecal sample 4 from infant 3
122731
122804
+
Lys
TTT
[ENA]
¢þ
>WENV181813643
OGTD01000079
[OGTD] human gut metagenome; fecal sample 1 from infant 3
84766
84693
-
Lys
TTT
[ENA]
¢þ
>WENV181814052
OGTE01002157
[OGTE] human gut metagenome; fecal sample 2 from infant 3
973
900
-
Lys
TTT
[ENA]
¢þ
>WENV181822750
OGUH01000023
[OGUH] human gut metagenome; fecal sample 3 from infant 3
179903
179830
-
Lys
TTT
[ENA]
¢þ
>WENV181833905
OGUQ01015225
[OGUQ] metagenome; Human gut stool
1601
1528
-
Lys
TTT
[ENA]
¢þ
>WENV181903304
OGXX01000830
[OGXX] human gut metagenome; faeces
6282
6357
+
Lys
TTT
[ENA]
¢þ
>WENV181934194
OGYT01002354
[OGYT] human gut metagenome; faeces
3317
3390
+
Lys
TTT
[ENA]
¢þ
>W141220691
AZYA01000035
Actinomycetota
Bifidobacterium sp. MSTE12 [AZYA]
56840
56767
-
Lys
TTT
[ENA]
¡û
>WENV182390823
OIEE01041415
[OIEE] human gut metagenome; human gut
246
173
-
Lys
TTT
[ENA]
¢þ
>WENV182401906
OIES01000016
[OIES] human gut metagenome; human gut
125065
125138
+
Lys
TTT
[ENA]
¢þ
>WENV182408782
OIFG01000006
[OIFG] human gut metagenome; stool
257505
257578
+
Lys
TTT
[ENA]
¢þ
>WENV182425905
OIHN01000066
[OIHN] human gut metagenome; human gut
15101
15028
-
Lys
TTT
[ENA]
¢þ
>WENV182480058
OIQW01000376
[OIQW] human gut metagenome; human gut
4929
5002
+
Lys
TTT
[ENA]
¢þ
>WENV182481302
OIRB01000402
[OIRB] human gut metagenome; human gut
5247
5320
+
Lys
TTT
[ENA]
¢þ
>WENV182488220
OIRZ01000470
[OIRZ] human gut metagenome; human gut
6743
6670
-
Lys
TTT
[ENA]
¢þ
>WENV182491387
OISK01000804
[OISK] human gut metagenome; human gut
107
34
-
Lys
TTT
[ENA]
¢þ
>WENV182505617
OIUY01000349
[OIUY] human gut metagenome; human gut
8102
8175
+
Lys
TTT
[ENA]
¢þ
>WENV182507560
OIVM01002076
[OIVM] human gut metagenome; human gut
158
231
+
Lys
TTT
[ENA]
¢þ
>WENV182538512
OIXV01000001
[OIXV] human gut metagenome; faeces
166859
166786
-
Lys
TTT
[ENA]
¢þ
>W141258198
CBWX010000073
Actinomycetota
Bifidobacterium animalis subsp. lactis CECT 8145 [CBWX]
1643720
1643793
+
Lys
TTT
[ENA]
¡û
>WENV182817457
OJZM01000003
[OJZM] human gut metagenome; human gut
184981
184908
-
Lys
TTT
[ENA]
¢þ
>WENV182850622
OKLF01000004
[OKLF] human gut metagenome; human gut
85209
85282
+
Lys
TTT
[ENA]
¢þ
>WENV182863120
OKPQ01001173
[OKPQ] human gut metagenome; human gut
3130
3203
+
Lys
TTT
[ENA]
¢þ
>WENV182937865
OKVD01000033
[OKVD] human gut metagenome; human gut
157587
157514
-
Lys
TTT
[ENA]
¢þ
>WENV182951656
OKVV01000012
[OKVV] human gut metagenome; human gut
92097
92024
-
Lys
TTT
[ENA]
¢þ
>WENV182952274
OKVW01000021
[OKVW] human gut metagenome; human gut
40457
40384
-
Lys
TTT
[ENA]
¢þ
>WENV182975956
OKXY01000472
[OKXY] human gut metagenome; human gut
4738
4811
+
Lys
TTT
[ENA]
¢þ
>WENV183007603
OLDJ01000194
[OLDJ] human gut metagenome; human gut
8640
8567
-
Lys
TTT
[ENA]
¢þ
>WENV183010428
OLDW01000330
[OLDW] human gut metagenome; human gut
7925
7998
+
Lys
TTT
[ENA]
¢þ
>WENV183010919
OLDY01000236
[OLDY] human gut metagenome; human gut
8906
8979
+
Lys
TTT
[ENA]
¢þ
>WENV183011672
OLEA01000027
[OLEA] human gut metagenome; human gut
27230
27157
-
Lys
TTT
[ENA]
¢þ
>WENV183015043
OLEN01000468
[OLEN] human gut metagenome; human gut
5703
5776
+
Lys
TTT
[ENA]
¢þ
>WENV183018165
OLEY01000286
[OLEY] human gut metagenome; human gut
8975
9048
+
Lys
TTT
[ENA]
¢þ
>WENV183018704
OLFA01000651
[OLFA] human gut metagenome; human gut
274
347
+
Lys
TTT
[ENA]
¢þ
>WENV183034024
OLFY01027249
[OLFY] human gut metagenome; faeces
574
501
-
Lys
TTT
[ENA]
¢þ
>WENV183065609
OLIJ01001566
[OLIJ] metagenome; faeces
1732
1805
+
Lys
TTT
[ENA]
¢þ
>WENV183103830
OLNJ01010164
[OLNJ] human gut metagenome; faeces
871
798
-
Lys
TTT
[ENA]
¢þ
>WENV183132585
OLOB01003733
[OLOB] human gut metagenome; faeces
6687
6614
-
Lys
TTT
[ENA]
¢þ
>WENV183136026
OLOF01000007
[OLOF] human gut metagenome; faeces
63992
64065
+
Lys
TTT
[ENA]
¢þ
>WENV183144478
OLOL01002865
[OLOL] human gut metagenome; faeces
10313
10240
-
Lys
TTT
[ENA]
¢þ
>WENV183147363
OLON01000096
[OLON] human gut metagenome; faeces
57376
57303
-
Lys
TTT
[ENA]
¢þ
>WENV183171161
OLPB01026599
[OLPB] human gut metagenome; faeces
201
128
-
Lys
TTT
[ENA]
¢þ
>WENV183171333
OLPC01000051
[OLPC] human gut metagenome; faeces
47137
47064
-
Lys
TTT
[ENA]
¢þ
>WENV183174394
OLPE01000937
[OLPE] human gut metagenome; faeces
13036
12963
-
Lys
TTT
[ENA]
¢þ
>WENV183182179
OLPK01000039
[OLPK] human gut metagenome; faeces
32120
32195
+
Lys
TTT
[ENA]
¢þ
>WENV183188639
OLPP01007207
[OLPP] human gut metagenome; faeces
721
794
+
Lys
TTT
[ENA]
¢þ
>WENV183204814
OLPZ01000802
[OLPZ] human gut metagenome; faeces
7067
7140
+
Lys
TTT
[ENA]
¢þ
>WENV183215768
OLQG01014543
[OLQG] human gut metagenome; faeces
1520
1447
-
Lys
TTT
[ENA]
¢þ
>WENV183228042
OLQQ01015685
[OLQQ] human gut metagenome; faeces
108
181
+
Lys
TTT
[ENA]
¢þ
>WENV183291365
OLSI01001134
[OLSI] human gut metagenome; faeces
16571
16498
-
Lys
TTT
[ENA]
¢þ
>WENV183297810
OLSM01010901
[OLSM] human gut metagenome; faeces
295
222
-
Lys
TTT
[ENA]
¢þ
>WENV183324152
OLVY01003730
[OLVY] human gut metagenome; feces
3231
3304
+
Lys
TTT
[ENA]
¢þ
>WENV183500249
OMGQ01004738
[OMGQ] human gut metagenome; human gut
799
872
+
Lys
TTT
[ENA]
¢þ
>WENV183501636
OMGS01002110
[OMGS] human gut metagenome; human gut
4311
4238
-
Lys
TTT
[ENA]
¢þ
>WENV183507423
OMGY01020923
[OMGY] human gut metagenome; human gut
350
423
+
Lys
TTT
[ENA]
¢þ
>WENV183762837
PPYE01286338
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
252
325
+
Lys
TTT
[ENA]
¢þ
>WENV183792843
PPYF01463851
[PPYF] human gut metagenome; stool from patient with Crohn's disease
3638
3711
+
Lys
TTT
[ENA]
¢þ
>C181023456
CP017098
Actinomycetota
Bifidobacterium animalis BL3 [CP017098]
217518
217445
-
Lys
TTT
-
¡û
>C181027159
CP017695
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum DSM 20092 [CP017695]
84256
84331
+
Lys
TTT
-
¡û
>C181068177
CP022544
Actinomycetota
Bifidobacterium pseudolongum UMB-MBP-01 [CP022544]
191184
191110
-
Lys
TTT
-
¡û
>C191057568
CP028460
Actinomycetota
Bifidobacterium animalis subsp. animalis CNCM I-4602 [CP028460]
228352
228279
-
Lys
TTT
-
¡û
>W141523698
JGYM01000007
Actinomycetota
Bifidobacterium animalis subsp. animalis [JGYM]
53266
53191
-
Lys
TTT
[ENA]
¡û
>C191073882
CP031154
Actinomycetota
Bifidobacterium animalis subsp. lactis HN019 [CP031154]
217331
217258
-
Lys
TTT
-
¡û
>W141524058
JGYU01000002
Actinomycetota
Bifidobacterium choerinum [JGYU]
281577
281502
-
Lys
TTT
[ENA]
¡û
>W141524158
JGYW01000001
Actinomycetota
Bifidobacterium gallicum DSM 20093 = LMG 11596 [JGYW]
47344
47419
+
Lys
TTT
[ENA]
¡û
>C191078820
CP031703
Actinomycetota
Bifidobacterium animalis subsp. lactis IDCC4301 [CP031703]
10773
10846
+
Lys
TTT
-
¡û
>W141524450
JGZB01000004
Actinomycetota
Bifidobacterium magnum [JGZB]
84622
84549
-
Lys
TTT
[ENA]
¡û
>W141524652
JGZG01000002
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum [JGZG]
32053
32128
+
Lys
TTT
[ENA]
¡û
>W141524736
JGZH01000003
Actinomycetota
Bifidobacterium pseudolongum subsp. pseudolongum [JGZH]
398661
398586
-
Lys
TTT
[ENA]
¡û
>W141525363
JGZU01000019
Actinomycetota
Bifidobacterium tsurumiense [JGZU]
391
318
-
Lys
TTT
[ENA]
¡û
>C191144135
CP035497
Actinomycetota
Bifidobacterium animalis 01 [CP035497]
217463
217390
-
Lys
TTT
-
¡û
>C191208236
LR134349
Actinomycetota
Bifidobacterium dentium NCTC11816 [LR134349]
228777
228704
-
Lys
TTT
-
¡û
>W141559184
JHWN01000012
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum DSM 20092 [JHWN]
21729
21804
+
Lys
TTT
[ENA]
¡û
>W09111589
ABXB01000048
Actinomycetota
Bifidobacterium gallicum DSM 20093 [ABXB]
93730
93655
-
Lys
TTT
[ENA]
¡û
>W1910179763
BJKG01000005
Actinomycetota
Bifidobacterium animalis J063 [BJKG]
64026
64099
+
Lys
TTT
[ENA]
¡û
>W1910179835
BJKH01000012
Actinomycetota
Bifidobacterium animalis J218 [BJKH]
137079
137006
-
Lys
TTT
[ENA]
¡û
>W1910179862
BJKI01000004
Actinomycetota
Bifidobacterium animalis J231 [BJKI]
64027
64100
+
Lys
TTT
[ENA]
¡û
>W1910342698
FTRE01000002
Actinomycetota
Bifidobacterium animalis [FTRE]
137179
137106
-
Lys
TTT
[ENA]
¡û
>W1910343317
FTRP01000002
Actinomycetota
Bifidobacterium animalis [FTRP]
137179
137106
-
Lys
TTT
[ENA]
¡û
>C141002679
CP003941
Actinomycetota
Bifidobacterium animalis subsp. lactis ATCC 27673 [CP003941]
226686
226613
-
Lys
TTT
[Ensembl]
¡û
>C09101026
CP001213
Actinomycetota
Bifidobacterium animalis subsp. lactis AD011 [CP001213]
217654
217581
-
Lys
TTT
[Ensembl]
¡û
>C09101075
CP001515
Actinomycetota
Bifidobacterium animalis subsp. lactis Bl-04 Bl-04; ATCC SD5219 [CP001515]
217463
217390
-
Lys
TTT
[Ensembl]
¡û
>C09101123
CP001606
Actinomycetota
Bifidobacterium animalis subsp. lactis DSM 10140 [CP001606]
217464
217391
-
Lys
TTT
[Ensembl]
¡û
>W1910814900
MVOH01000007
Actinomycetota
Bifidobacterium criceti 71 [MVOH]
849
776
-
Lys
TTT
[ENA]
¡û
>W1910910842
NHMR02000002
Actinomycetota
Bifidobacterium animalis subsp. animalis YL2 [NHMR]
748216
748143
-
Lys
TTT
[ENA]
¡û
>W1910923039
NIGQ01000004
Actinomycetota
Bifidobacterium animalis subsp. lactis LMG P-17502_2 [NIGQ]
137010
136937
-
Lys
TTT
[ENA]
¡û
>W1910923083
NIGR01000003
Actinomycetota
Bifidobacterium animalis subsp. lactis LMG P-17502_1 [NIGR]
63839
63912
+
Lys
TTT
[ENA]
¡û
>W1911768196
QXGI01000002
Actinomycetota
Bifidobacterium castoris 2020B [QXGI]
311129
311055
-
Lys
TTT
[ENA]
¡û
>W1911768427
QXGM01000002
Actinomycetota
Bifidobacterium dolichotidis 2036B [QXGM]
599206
599279
+
Lys
TTT
[ENA]
¡û
>W1810049104
PCGZ01000002
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1524B [PCGZ]
15264
15191
-
Lys
TTT
[ENA]
¡û
>W1810049150
PCHA01000012
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1747B [PCHA]
11452
11377
-
Lys
TTT
[ENA]
¡û
>W1810049216
PCHB01000007
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1744B [PCHB]
85366
85441
+
Lys
TTT
[ENA]
¡û
>W1810049255
PCHC01000002
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1619B [PCHC]
94781
94706
-
Lys
TTT
[ENA]
¡û
>W1810049313
PCHD01000003
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1734B [PCHD]
6110
6036
-
Lys
TTT
[ENA]
¡û
>W1810049369
PCHE01000003
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1691B [PCHE]
1039
1114
+
Lys
TTT
[ENA]
¡û
>W1810049448
PCHF01000003
Actinomycetota
Bifidobacterium pseudolongum subsp. pseudolongum 1595B [PCHF]
23567
23492
-
Lys
TTT
[ENA]
¡û
>W1810049461
PCHG01000006
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1549B [PCHG]
10577
10502
-
Lys
TTT
[ENA]
¡û
>W1810049541
PCHH01000001
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum 1520B [PCHH]
294198
294123
-
Lys
TTT
[ENA]
¡û
>W1810049576
PCHI01000002
Actinomycetota
Bifidobacterium pseudolongum subsp. pseudolongum 1370B [PCHI]
71679
71604
-
Lys
TTT
[ENA]
¡û
>W1810084967
PESQ01000003
Actinomycetota
Bifidobacterium animalis subsp. lactis BB-12 [PESQ]
137065
136992
-
Lys
TTT
[ENA]
¡û
>W1810121986
PHUS01000009
Actinomycetota
Bifidobacterium animalis subsp. lactis BM 25 [PHUS]
47175
47102
-
Lys
TTT
[ENA]
¡û
>W1810186237
PKGT01000003
Actinomycetota
Alloscardovia omnicolens UMB0006 [PKGT]
273363
273290
-
Lys
TTT
[ENA]
¡û
>W1810186303
PKGU01000012
Actinomycetota
Alloscardovia omnicolens UMB0064 [PKGU]
246
173
-
Lys
TTT
[ENA]
¡û
>W1810541589
QDIK01000003
Actinomycetota
Bifidobacterium animalis subsp. lactis DS28_2 [QDIK]
63880
63953
+
Lys
TTT
[ENA]
¡û
>W1810541640
QDIL01000003
Actinomycetota
Bifidobacterium animalis subsp. lactis DS27_2 [QDIL]
137101
137028
-
Lys
TTT
[ENA]
¡û
>W1810541741
QDIN01000005
Actinomycetota
Bifidobacterium animalis subsp. lactis DS24_2 [QDIN]
105963
105890
-
Lys
TTT
[ENA]
¡û
>W1810541767
QDIO01000010
Actinomycetota
Bifidobacterium animalis subsp. lactis DS23_2 [QDIO]
13831
13758
-
Lys
TTT
[ENA]
¡û
>W1810541834
QDIP01000003
Actinomycetota
Bifidobacterium animalis DS2_2 [QDIP]
64044
64117
+
Lys
TTT
[ENA]
¡û
>W1810541938
QDIR01000004
Actinomycetota
Bifidobacterium animalis DS15_2 [QDIR]
64044
64117
+
Lys
TTT
[ENA]
¡û
>W1810542035
QDIT01000002
Actinomycetota
Bifidobacterium animalis DS11_2 [QDIT]
137101
137028
-
Lys
TTT
[ENA]
¡û
>W1810542084
QDIU01000002
Actinomycetota
Bifidobacterium animalis DS1_2 [QDIU]
137101
137028
-
Lys
TTT
[ENA]
¡û
>W1810542118
QDIV01000025
Actinomycetota
Bifidobacterium animalis subsp. lactis CF3_2 [QDIV]
22878
22951
+
Lys
TTT
[ENA]
¡û
>W1810542311
QDIZ01000005
Actinomycetota
Bifidobacterium animalis DS20_2 [QDIZ]
63993
64066
+
Lys
TTT
[ENA]
¡û
>W1810813805
QRZV01000001
Actinomycetota
Bifidobacterium pseudolongum AF13-3LB [QRZV]
181290
181215
-
Lys
TTT
[ENA]
¡û
>W1810837820
QSSU01000004
Actinomycetota
Bifidobacterium animalis TF04-14 [QSSU]
63964
64037
+
Lys
TTT
[ENA]
¡û
>W1810839893
QSUF01000004
Actinomycetota
Bifidobacterium animalis OM05-7AA [QSUF]
63958
64031
+
Lys
TTT
[ENA]
¡û
>C151000407
AP012326
Actinomycetota
Bifidobacterium dentium JCM 1195 = DSM 20436 [AP012326]
228778
228705
-
Lys
TTT
[Ensembl]
¡û
>C151024263
CP007457
Actinomycetota
Bifidobacterium pseudolongum PV8-2 [CP007457]
200845
200770
-
Lys
TTT
[Ensembl]
¡û
>C151026498
CP007522
Actinomycetota
Bifidobacterium animalis subsp. lactis KLDS2.0603 [CP007522]
217332
217259
-
Lys
TTT
[Ensembl]
¡û
>C151033719
CP007755
Actinomycetota
Bifidobacterium animalis RH [CP007755]
217843
217770
-
Lys
TTT
[Ensembl]
¡û
>C151042241
CP009045
Actinomycetota
Bifidobacterium animalis subsp. lactis BF052 [CP009045]
217330
217257
-
Lys
TTT
[Ensembl]
¡û
>C151068812
CP010433
Actinomycetota
Bifidobacterium animalis A6 [CP010433]
217463
217390
-
Lys
TTT
[Ensembl]
¡û
>W10127739
AEEQ01000011
Actinomycetota
Bifidobacterium dentium ATCC 27679 [AEEQ]
124256
124329
+
Lys
TTT
[ENA]
¡û
>C10101328
CP001853
Actinomycetota
Bifidobacterium animalis subsp. lactis BB-12 [CP001853]
853075
853002
-
Lys
TTT
[Ensembl]
¡û
>C10101379
CP001892
Actinomycetota
Bifidobacterium animalis subsp. lactis V9 [CP001892]
217463
217390
-
Lys
TTT
[Ensembl]
¡û
>C10101531
CP001750
Actinomycetota
Bifidobacterium dentium Bd1 [CP001750]
228776
228703
-
Lys
TTT
[Ensembl]
¡û
>C11101935
CP003039
Actinomycetota
Bifidobacterium animalis subsp. lactis BLC1 [CP003039]
217462
217389
-
Lys
TTT
[Ensembl]
¡û
>C11101984
CP002915
Actinomycetota
Bifidobacterium animalis subsp. lactis CNCM I-2494 [CP002915]
217473
217400
-
Lys
TTT
[Ensembl]
¡û
>W1511441810
JUQY01000025
Actinomycetota
Alloscardovia omnicolens 842_GVAG [JUQY]
386
313
-
Lys
TTT
[ENA]
¡û
>W1511453957
JVFQ01000023
Actinomycetota
Alloscardovia omnicolens 476_GVAG [JVFQ]
3081
3154
+
Lys
TTT
[ENA]
¡û
>W1511459582
JVKN01000008
Actinomycetota
Alloscardovia omnicolens 350_GVAG [JVKN]
36472
36545
+
Lys
TTT
[ENA]
¡û
>W1511473344
JWAI01000010
Actinomycetota
Alloscardovia omnicolens 1173_BLON [JWAI]
262
189
-
Lys
TTT
[ENA]
¡û
>W1511476918
JWFH01000008
Actinomycetota
Alloscardovia omnicolens 1036_GVAG [JWFH]
10602
10675
+
Lys
TTT
[ENA]
¡û
>W11135227
AEEQ01000011
Actinomycetota
Bifidobacterium dentium ATCC 27679 [AEEQ]
124256
124329
+
Lys
TTT
[ENA]
¡û
>W11137329
AEHJ01000029
Actinomycetota
Bifidobacterium dentium JCVIHMP022 [AEHJ]
4008
4081
+
Lys
TTT
[ENA]
¡û
>C121002642
CP002567
Actinomycetota
Bifidobacterium animalis subsp. animalis ATCC 25527 [CP002567]
228471
228396
-
Lys
TTT
[Ensembl]
¡û
>C121013678
CP003497
Actinomycetota
Bifidobacterium animalis subsp. lactis B420 [CP003497]
217462
217389
-
Lys
TTT
[Ensembl]
¡û
>C121013727
CP003498
Actinomycetota
Bifidobacterium animalis subsp. lactis Bi-07 [CP003498]
217463
217390
-
Lys
TTT
[Ensembl]
¡û
>C161087466
CP015407
Actinomycetota
Bifidobacterium animalis subsp. animalis YL2 [CP015407]
666936
666863
-
Lys
TTT
[Ensembl]
¡û
>W1610027692
AWFK01000004
Actinomycetota
Bifidobacterium animalis subsp. animalis MCC 0483 [AWFK]
304791
304716
-
Lys
TTT
[ENA]
¡û
>W1610027733
AWFL01000003
Actinomycetota
Bifidobacterium animalis subsp. lactis ATCC 27536 [AWFL]
136761
136688
-
Lys
TTT
[ENA]
¡û
>W1610027816
AWFM01000008
Actinomycetota
Bifidobacterium animalis subsp. lactis ATCC 27674 [AWFM]
136781
136708
-
Lys
TTT
[ENA]
¡û
>W1610027870
AWFN01000004
Actinomycetota
Bifidobacterium animalis subsp. animalis MCC 0499 [AWFN]
154755
154828
+
Lys
TTT
[ENA]
¡û
>W1610027916
AWFO01000008
Actinomycetota
Bifidobacterium animalis subsp. animalis MCC 1489 [AWFO]
112471
112546
+
Lys
TTT
[ENA]
¡û
>W1610027934
AWFP01000002
Actinomycetota
Bifidobacterium animalis subsp. lactis ATCC 27673 [AWFP]
289826
289753
-
Lys
TTT
[ENA]
¡û
>W1610027999
AWFQ01000001
Actinomycetota
Bifidobacterium animalis subsp. animalis ATCC 27672 [AWFQ]
281862
281789
-
Lys
TTT
[ENA]
¡û
>W1610058886
BCAE01000087
Actinomycetota
Actinobacteria bacterium UC5.1-1B11 [BCAE]
589
514
-
Lys
TTT
[ENA]
¡û
>W1610075720
BCYE01000006
Actinomycetota
Bifidobacterium dentium [BCYE]
123041
123114
+
Lys
TTT
[ENA]
¡û
>W1610083113
CBUQ010000005
Actinomycetota
Bifidobacterium animalis subsp. animalis IM386 [CBUQ]
290825
290750
-
Lys
TTT
[ENA]
¡û
>W121031668
AHGW01000001
Actinomycetota
Bifidobacterium animalis subsp. lactis BS 01 [AHGW]
279338
279265
-
Lys
TTT
[ENA]
¡û
>C131012167
CP004053
Actinomycetota
Bifidobacterium animalis subsp. lactis Bl12 [CP004053]
217325
217252
-
Lys
TTT
[Ensembl]
¡û
>W1610518823
JDTR01000015
Actinomycetota
Bifidobacterium tsurumiense DSM 17777 [JDTR]
74270
74343
+
Lys
TTT
[ENA]
¡û
>W1610519018
JDTV01000016
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum DSM 20092 [JDTV]
32070
32145
+
Lys
TTT
[ENA]
¡û
>W1610519057
JDTW01000007
Actinomycetota
Bifidobacterium gallicum DSM 20093 = LMG 11596 [JDTW]
47371
47446
+
Lys
TTT
[ENA]
¡û
>W1610519199
JDTZ01000005
Actinomycetota
Bifidobacterium pseudolongum subsp. pseudolongum DSM 20099 [JDTZ]
69578
69653
+
Lys
TTT
[ENA]
¡û
>W1610519521
JDUG01000035
Actinomycetota
Bifidobacterium magnum DSM 20222 [JDUG]
1987
1914
-
Lys
TTT
[ENA]
¡û
>W1610519637
JDUJ01000014
Actinomycetota
Bifidobacterium choerinum DSM 20434 [JDUJ]
31573
31648
+
Lys
TTT
[ENA]
¡û
>W1610520325
JDUY01000003
Actinomycetota
Bifidobacterium dentium JCM 1195 = DSM 20436 [JDUY]
203615
203688
+
Lys
TTT
[ENA]
¡û
>W1610889288
LRPK01000006
Actinomycetota
Alloscardovia omnicolens [LRPK]
2889
2962
+
Lys
TTT
[ENA]
¡û
>W1610921387
LSUJ01000004
Actinomycetota
Bifidobacterium dentium [LSUJ]
44176
44249
+
Lys
TTT
[ENA]
¡û
>WENV085301
BABC01000253
Gut microbiome of Human (healthy human sample In-B, Infant, Male)
5203
5126
-
Lys
TTT
[ENA]
>W1710023900
AWFK01000004
Actinomycetota
Bifidobacterium animalis subsp. animalis MCC 0483 [AWFK]
304791
304716
-
Lys
TTT
[ENA]
¡û
>W1710023980
AWFN01000004
Actinomycetota
Bifidobacterium animalis subsp. animalis MCC 0499 [AWFN]
154755
154828
+
Lys
TTT
[ENA]
¡û
>W1710024026
AWFO01000008
Actinomycetota
Bifidobacterium animalis subsp. animalis MCC 1489 [AWFO]
112471
112546
+
Lys
TTT
[ENA]
¡û
>W1710055645
BCAE01000087
Actinomycetota
Actinobacteria bacterium UC5.1-1B11 [BCAE]
589
514
-
Lys
TTT
[ENA]
¡û
>W1710073535
BCYE01000006
Actinomycetota
Bifidobacterium dentium [BCYE]
123041
123114
+
Lys
TTT
[ENA]
¡û
>W1710088233
CBUQ010000005
Actinomycetota
Bifidobacterium animalis subsp. animalis IM386 [CBUQ]
290825
290750
-
Lys
TTT
[ENA]
¡û
>W1710534911
FNSE01000001
Actinomycetota
Bifidobacterium dentium JCM 1195 = DSM 20436 [FNSE]
1241583
1241656
+
Lys
TTT
[ENA]
¡û
>W1710614343
JDTR01000015
Actinomycetota
Bifidobacterium tsurumiense DSM 17777 [JDTR]
74270
74343
+
Lys
TTT
[ENA]
¡û
>W1710614473
JDTV01000016
Actinomycetota
Bifidobacterium pseudolongum subsp. globosum DSM 20092 [JDTV]
32070
32145
+
Lys
TTT
[ENA]
¡û
>W1710614512
JDTW01000007
Actinomycetota
Bifidobacterium gallicum DSM 20093 = LMG 11596 [JDTW]
47371
47446
+
Lys
TTT
[ENA]
¡û
>W1710614654
JDTZ01000005
Actinomycetota
Bifidobacterium pseudolongum subsp. pseudolongum DSM 20099 [JDTZ]
69578
69653
+
Lys
TTT
[ENA]
¡û
>W1710614976
JDUG01000035
Actinomycetota
Bifidobacterium magnum DSM 20222 [JDUG]
1987
1914
-
Lys
TTT
[ENA]
¡û
>W1710615092
JDUJ01000014
Actinomycetota
Bifidobacterium choerinum DSM 20434 [JDUJ]
31573
31648
+
Lys
TTT
[ENA]
¡û
>W1710615738
JDUY01000003
Actinomycetota
Bifidobacterium dentium JCM 1195 = DSM 20436 [JDUY]
203615
203688
+
Lys
TTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK