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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.281396 (7 seq.)
>PHG181005334
MF347636
Siphoviridae
Streptomyces phage NootNoot (MF347636)
94547
94620
+
Arg
ACG
[ENA]
¡û
>PHG181005368
MF347637
Siphoviridae
Streptomyces phage Paradiddles (MF347637)
97360
97433
+
Arg
ACG
[ENA]
¡û
>PHG181005404
MF347638
Siphoviridae
Streptomyces phage Peebs (MF347638)
96339
96412
+
Arg
ACG
[ENA]
¡û
>PHG181005439
MF347639
Siphoviridae
Streptomyces phage Samisti12 (MF347639)
97723
97796
+
Arg
ACG
[ENA]
¡û
>PHG181005486
MF358541
Siphoviridae
Streptomyces phage Warpy (MF358541)
96302
96375
+
Arg
ACG
[ENA]
¡û
>PHG181005522
MF358542
Siphoviridae
Streptomyces phage Sushi23 (MF358542)
97389
97462
+
Arg
ACG
[ENA]
¡û
>PHG14103307
KM652554
Siphoviridae
Streptomyces phage Jay2Jay DSS3-P1 (KM652554)
96823
96896
+
Arg
ACG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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