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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.281491 (27 seq.)
>W1710783111
LJFO01000011
Actinomycetota
Mycobacteroides immunogenum [LJFO]
24969
25044
+
Arg
CCG
[ENA]
¡û
>W1710783169
LJFP01000012
Actinomycetota
Mycobacteroides immunogenum [LJFP]
24969
25044
+
Arg
CCG
[ENA]
¡û
>W1710783226
LJFQ01000010
Actinomycetota
Mycobacteroides immunogenum [LJFQ]
211495
211420
-
Arg
CCG
[ENA]
¡û
>W1710783288
LJFR01000012
Actinomycetota
Mycobacteroides immunogenum [LJFR]
24969
25044
+
Arg
CCG
[ENA]
¡û
>W1710783335
LJFS01000014
Actinomycetota
Mycobacteroides immunogenum [LJFS]
24969
25044
+
Arg
CCG
[ENA]
¡û
>W1710783403
LJFT01000004
Actinomycetota
Mycobacteroides immunogenum [LJFT]
24969
25044
+
Arg
CCG
[ENA]
¡û
>W1710783499
LJFU01000005
Actinomycetota
Mycobacteroides immunogenum [LJFU]
17781
17856
+
Arg
CCG
[ENA]
¡û
>W1710783563
LJFV01000010
Actinomycetota
Mycobacteroides immunogenum [LJFV]
193455
193380
-
Arg
CCG
[ENA]
¡û
>W1710783609
LJFW01000005
Actinomycetota
Mycobacteroides immunogenum [LJFW]
17851
17926
+
Arg
CCG
[ENA]
¡û
>W1710783689
LJFX01000011
Actinomycetota
Mycobacteroides immunogenum [LJFX]
24969
25044
+
Arg
CCG
[ENA]
¡û
>W1710783784
LJFY01000025
Actinomycetota
Mycobacteroides immunogenum [LJFY]
13140
13215
+
Arg
CCG
[ENA]
¡û
>W1711007258
LQPA01000007
Actinomycetota
Mycobacteroides immunogenum [LQPA]
24755
24830
+
Arg
CCG
[ENA]
¡û
>W1711298837
MAFP01000014
Actinomycetota
Mycobacteroides immunogenum [MAFP]
17704
17779
+
Arg
CCG
[ENA]
¡û
>W1511512830
JXUU01000006
Actinomycetota
Mycobacteroides immunogenum SMUC14 [JXUU]
24829
24904
+
Arg
CCG
[ENA]
¡û
>C161036582
CP011530
Actinomycetota
Mycobacteroides immunogenum CCUG 47286 [CP011530]
4645795
4645720
-
Arg
CCG
-
¡û
>C161094549
CP016189
Actinomycetota
Mycobacteroides immunogenum FLAC016 [CP016189]
4678636
4678561
-
Arg
CCG
-
¡û
>W1610647619
LJFO01000011
Actinomycetota
Mycobacteroides immunogenum [LJFO]
24969
25044
+
Arg
CCG
[ENA]
¡û
>W1610647677
LJFP01000012
Actinomycetota
Mycobacteroides immunogenum [LJFP]
24969
25044
+
Arg
CCG
[ENA]
¡û
>W1610647734
LJFQ01000010
Actinomycetota
Mycobacteroides immunogenum [LJFQ]
211495
211420
-
Arg
CCG
[ENA]
¡û
>W1610647796
LJFR01000012
Actinomycetota
Mycobacteroides immunogenum [LJFR]
24969
25044
+
Arg
CCG
[ENA]
¡û
>W1610647843
LJFS01000014
Actinomycetota
Mycobacteroides immunogenum [LJFS]
24969
25044
+
Arg
CCG
[ENA]
¡û
>W1610647911
LJFT01000004
Actinomycetota
Mycobacteroides immunogenum [LJFT]
24969
25044
+
Arg
CCG
[ENA]
¡û
>W1610648007
LJFU01000005
Actinomycetota
Mycobacteroides immunogenum [LJFU]
17781
17856
+
Arg
CCG
[ENA]
¡û
>W1610648071
LJFV01000010
Actinomycetota
Mycobacteroides immunogenum [LJFV]
193455
193380
-
Arg
CCG
[ENA]
¡û
>W1610648117
LJFW01000005
Actinomycetota
Mycobacteroides immunogenum [LJFW]
17851
17926
+
Arg
CCG
[ENA]
¡û
>W1610648197
LJFX01000011
Actinomycetota
Mycobacteroides immunogenum [LJFX]
24969
25044
+
Arg
CCG
[ENA]
¡û
>W1610648292
LJFY01000025
Actinomycetota
Mycobacteroides immunogenum [LJFY]
13140
13215
+
Arg
CCG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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