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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.282604 (87 seq.)
>W1711169413
LVZC01000009
Gammaproteobacteria
Haemophilus influenzae [LVZC]
21715
21640
-
Lys
CTT
[ENA]
¡û
>C171106538
CP020411
Gammaproteobacteria
Haemophilus influenzae FDAARGOS_199 [CP020411]
1687179
1687254
+
Lys
CTT
-
¡û
>C010689
L42023
Gammaproteobacteria
Haemophilus influenzae Rd KW20 [L42023]
401871
401796
-
Lys
CTT
[Ensembl]
¡û
>w025107
AAZG01000003
Gammaproteobacteria
Haemophilus influenzae PittAA [AAZG]
129145
129222
+
Lys
CTT
[ENA]
¡û
>w024975
AAZD01000002
Gammaproteobacteria
Haemophilus influenzae 22.1-21 [AAZD]
250728
250651
-
Lys
CTT
[ENA]
¡û
>WENV182408727
OIFF01001759
[OIFF] human gut metagenome; stool
317
392
+
Lys
CTT
[ENA]
¢þ
>WENV182412211
OIFS01000161
[OIFS] human gut metagenome; stool
99
174
+
Lys
CTT
[ENA]
¢þ
>WENV182413330
OIFX01000545
[OIFX] human gut metagenome; stool
1820
1895
+
Lys
CTT
[ENA]
¢þ
>WENV182966149
OKWV01000021
[OKWV] human gut metagenome; stool
74122
74197
+
Lys
CTT
[ENA]
¢þ
>W141485474
JFZK01000015
Gammaproteobacteria
Haemophilus influenzae [JFZK]
73845
73770
-
Lys
CTT
[ENA]
¡û
>W141485610
JFZM01000015
Gammaproteobacteria
Haemophilus influenzae [JFZM]
73994
73919
-
Lys
CTT
[ENA]
¡û
>C181213362
LS483438
Gammaproteobacteria
Haemophilus influenzae NCTC12975 [LS483438]
654757
654832
+
Lys
CTT
-
¡û
>C191078240
CP031687
Gammaproteobacteria
Haemophilus influenzae P641-4342 [CP031687]
654145
654220
+
Lys
CTT
-
¡û
>C191078475
CP031691
Gammaproteobacteria
Haemophilus influenzae P615-8618 [CP031691]
652043
652118
+
Lys
CTT
-
¡û
>W1910584652
JXYJ01000027
Gammaproteobacteria
Haemophilus influenzae Fi176 [JXYJ]
21371
21296
-
Lys
CTT
[ENA]
¡û
>W1910833040
MZHO01000049
Gammaproteobacteria
Haemophilus influenzae 84P56H1 [MZHO]
92571
92646
+
Lys
CTT
[ENA]
¡û
>W1910833622
MZIA01000002
Gammaproteobacteria
Haemophilus influenzae 75P47H1 [MZIA]
22195
22120
-
Lys
CTT
[ENA]
¡û
>W1910833856
MZIE01000022
Gammaproteobacteria
Haemophilus influenzae 73P39H1 [MZIE]
21620
21545
-
Lys
CTT
[ENA]
¡û
>W1910834916
MZIY01000055
Gammaproteobacteria
Haemophilus influenzae 59P16H1 [MZIY]
79151
79076
-
Lys
CTT
[ENA]
¡û
>W1910835610
MZJM01000011
Gammaproteobacteria
Haemophilus influenzae 49P21H1 [MZJM]
22114
22039
-
Lys
CTT
[ENA]
¡û
>W1910836338
MZKA01000035
Gammaproteobacteria
Haemophilus influenzae 39P20H1 [MZKA]
105731
105806
+
Lys
CTT
[ENA]
¡û
>W1910836675
MZKG01000044
Gammaproteobacteria
Haemophilus influenzae 31P14H6 [MZKG]
190790
190865
+
Lys
CTT
[ENA]
¡û
>W1910836741
MZKI01000006
Gammaproteobacteria
Haemophilus influenzae 27P39H1 [MZKI]
21732
21657
-
Lys
CTT
[ENA]
¡û
>W1910836817
MZKJ01000022
Gammaproteobacteria
Haemophilus influenzae 27P12H6 [MZKJ]
14291
14216
-
Lys
CTT
[ENA]
¡û
>W1910837343
MZKT01000046
Gammaproteobacteria
Haemophilus influenzae 14P46H1 [MZKT]
21692
21617
-
Lys
CTT
[ENA]
¡û
>W1910837372
MZKU01000005
Gammaproteobacteria
Haemophilus influenzae 14P41H1 [MZKU]
46378
46303
-
Lys
CTT
[ENA]
¡û
>W1910837702
MZLA01000023
Gammaproteobacteria
Haemophilus influenzae 14P12H1 [MZLA]
21930
21855
-
Lys
CTT
[ENA]
¡û
>W1910837804
MZLC01000138
Gammaproteobacteria
Haemophilus influenzae 148P17H1 [MZLC]
45535
45610
+
Lys
CTT
[ENA]
¡û
>W1910837862
MZLD01000047
Gammaproteobacteria
Haemophilus influenzae 13P36H1 [MZLD]
113601
113526
-
Lys
CTT
[ENA]
¡û
>W1910838019
MZLG01000078
Gammaproteobacteria
Haemophilus influenzae 135P29H4 [MZLG]
74123
74048
-
Lys
CTT
[ENA]
¡û
>W1910838108
MZLI01000021
Gammaproteobacteria
Haemophilus influenzae 12P56H2 [MZLI]
183585
183660
+
Lys
CTT
[ENA]
¡û
>W1910874955
NDZF01000055
Gammaproteobacteria
Haemophilus influenzae 107P4H1 [NDZF]
74098
74173
+
Lys
CTT
[ENA]
¡û
>W1910875924
NDZY01000071
Gammaproteobacteria
Haemophilus influenzae 133P17H1 [NDZY]
81852
81927
+
Lys
CTT
[ENA]
¡û
>W1910875949
NDZZ01000006
Gammaproteobacteria
Haemophilus influenzae 133P50H1 [NDZZ]
48749
48824
+
Lys
CTT
[ENA]
¡û
>W1910876127
NEAC01000062
Gammaproteobacteria
Haemophilus influenzae 13P24H2 [NEAC]
110826
110901
+
Lys
CTT
[ENA]
¡û
>W1910876177
NEAD01000049
Gammaproteobacteria
Haemophilus influenzae 148P4H1 [NEAD]
129265
129190
-
Lys
CTT
[ENA]
¡û
>W1910876857
NEAR01000019
Gammaproteobacteria
Haemophilus influenzae 27P38H1 [NEAR]
21732
21657
-
Lys
CTT
[ENA]
¡û
>W1910877264
NEAZ01000008
Gammaproteobacteria
Haemophilus influenzae 34P8H9 [NEAZ]
61295
61220
-
Lys
CTT
[ENA]
¡û
>W1910877368
NEBB01000005
Gammaproteobacteria
Haemophilus influenzae 37P4H1 [NEBB]
14452
14377
-
Lys
CTT
[ENA]
¡û
>W1910877466
NEBC01000052
Gammaproteobacteria
Haemophilus influenzae 37P6H2 [NEBC]
14452
14377
-
Lys
CTT
[ENA]
¡û
>W1910877684
NEBH01000013
Gammaproteobacteria
Haemophilus influenzae 40P92H1 [NEBH]
184062
184137
+
Lys
CTT
[ENA]
¡û
>W1910878068
NEBO01000020
Gammaproteobacteria
Haemophilus influenzae 46P8H1 [NEBO]
21731
21656
-
Lys
CTT
[ENA]
¡û
>W1910878859
NECE01000031
Gammaproteobacteria
Haemophilus influenzae 63P35H1 [NECE]
21830
21755
-
Lys
CTT
[ENA]
¡û
>W1910879005
NECH01000013
Gammaproteobacteria
Haemophilus influenzae 67P10H4 [NECH]
21692
21617
-
Lys
CTT
[ENA]
¡û
>W1910879097
NECI01000090
Gammaproteobacteria
Haemophilus influenzae 68P37H1 [NECI]
74209
74134
-
Lys
CTT
[ENA]
¡û
>W1910879346
NECN01000063
Gammaproteobacteria
Haemophilus influenzae 84P15H1 [NECN]
76731
76806
+
Lys
CTT
[ENA]
¡û
>W1911752896
QWLY01000001
Gammaproteobacteria
Haemophilus influenzae 65001_BAL_Hi1 [QWLY]
159169
159094
-
Lys
CTT
[ENA]
¡û
>W1911753308
QWMG01000001
Gammaproteobacteria
Haemophilus influenzae 60362_BAL_Hi2 [QWMG]
158377
158302
-
Lys
CTT
[ENA]
¡û
>W1911753355
QWMH01000001
Gammaproteobacteria
Haemophilus influenzae 60362_NP_Hi1 [QWMH]
206892
206967
+
Lys
CTT
[ENA]
¡û
>W1810015239
BGMP01000004
Gammaproteobacteria
Haemophilus influenzae 7 [BGMP]
109831
109756
-
Lys
CTT
[ENA]
¡û
>W1810764485
QQCB01000002
Gammaproteobacteria
Haemophilus influenzae M38052 [QQCB]
183841
183916
+
Lys
CTT
[ENA]
¡û
>W1810766982
QQDY01000002
Gammaproteobacteria
Haemophilus influenzae M39022 [QQDY]
998
923
-
Lys
CTT
[ENA]
¡û
>W1810769730
QQFZ01000002
Gammaproteobacteria
Haemophilus influenzae M03842 [QQFZ]
159640
159565
-
Lys
CTT
[ENA]
¡û
>W1810769871
QQGC01000001
Gammaproteobacteria
Haemophilus influenzae M14647 [QQGC]
154080
154005
-
Lys
CTT
[ENA]
¡û
>W1810770585
QQGQ01000002
Gammaproteobacteria
Haemophilus influenzae M28025 [QQGQ]
208371
208446
+
Lys
CTT
[ENA]
¡û
>W1810771356
QQHF01000002
Gammaproteobacteria
Haemophilus influenzae M14666 [QQHF]
153644
153569
-
Lys
CTT
[ENA]
¡û
>W1810775077
QQJZ01000002
Gammaproteobacteria
Haemophilus influenzae M24593 [QQJZ]
158923
158848
-
Lys
CTT
[ENA]
¡û
>W1810775524
QQKI01000001
Gammaproteobacteria
Haemophilus influenzae M17527 [QQKI]
208037
208112
+
Lys
CTT
[ENA]
¡û
>W1810775782
QQKN01000001
Gammaproteobacteria
Haemophilus influenzae M04780 [QQKN]
154441
154366
-
Lys
CTT
[ENA]
¡û
>W1810908427
QVIS01000002
Gammaproteobacteria
Haemophilus influenzae P633-8486 [QVIS]
186979
186904
-
Lys
CTT
[ENA]
¡û
>W1810908586
QVIV01000005
Gammaproteobacteria
Haemophilus influenzae P619-9590 [QVIV]
40680
40605
-
Lys
CTT
[ENA]
¡û
>W1810908645
QVIW01000003
Gammaproteobacteria
Haemophilus influenzae P611-7680 [QVIW]
153080
153005
-
Lys
CTT
[ENA]
¡û
>W1810908745
QVIY01000002
Gammaproteobacteria
Haemophilus influenzae P593-7974 [QVIY]
159591
159516
-
Lys
CTT
[ENA]
¡û
>W1810910134
QVJZ01000002
Gammaproteobacteria
Haemophilus influenzae P640-3960 [QVJZ]
193460
193535
+
Lys
CTT
[ENA]
¡û
>W1810910192
QVKA01000007
Gammaproteobacteria
Haemophilus influenzae P639-3649 [QVKA]
2898
2973
+
Lys
CTT
[ENA]
¡û
>W1810910240
QVKB01000003
Gammaproteobacteria
Haemophilus influenzae P638-3144 [QVKB]
21883
21808
-
Lys
CTT
[ENA]
¡û
>W1810910589
QVKI01000002
Gammaproteobacteria
Haemophilus influenzae P629-7106 [QVKI]
218776
218851
+
Lys
CTT
[ENA]
¡û
>W1810910749
QVKL01000002
Gammaproteobacteria
Haemophilus influenzae P626-9221 [QVKL]
184090
184165
+
Lys
CTT
[ENA]
¡û
>W10103968
ACSM01000003
Gammaproteobacteria
Haemophilus influenzae RdAW [ACSM]
133092
133167
+
Lys
CTT
[ENA]
¡û
>W11104752
ACSM01000003
Gammaproteobacteria
Haemophilus influenzae RdAW [ACSM]
133092
133167
+
Lys
CTT
[ENA]
¡û
>W1511204180
JMQP01000002
Gammaproteobacteria
Haemophilus influenzae 1209 [JMQP]
1512829
1512904
+
Lys
CTT
[ENA]
¡û
>W1511450765
JVCL01000013
Gammaproteobacteria
Haemophilus influenzae 552_HINF [JVCL]
21695
21620
-
Lys
CTT
[ENA]
¡û
>W1511451641
JVDE01000035
Gammaproteobacteria
Haemophilus influenzae 536_HINF [JVDE]
22552
22477
-
Lys
CTT
[ENA]
¡û
>W1511453278
JVEZ01000047
Gammaproteobacteria
Haemophilus influenzae 492_HINF [JVEZ]
23799
23724
-
Lys
CTT
[ENA]
¡û
>W1511457889
JVIR01000042
Gammaproteobacteria
Haemophilus influenzae 40_HINF [JVIR]
22408
22333
-
Lys
CTT
[ENA]
¡û
>W1511465767
JVRF01000038
Gammaproteobacteria
Haemophilus influenzae 177_HINF [JVRF]
35697
35772
+
Lys
CTT
[ENA]
¡û
>W1511506174
JXLX01000007
Gammaproteobacteria
Haemophilus influenzae Hi322 [JXLX]
101335
101410
+
Lys
CTT
[ENA]
¡û
>W1511506236
JXLY01000019
Gammaproteobacteria
Haemophilus influenzae Hi345 [JXLY]
192597
192672
+
Lys
CTT
[ENA]
¡û
>W1511506294
JXLZ01000020
Gammaproteobacteria
Haemophilus influenzae Hi359 [JXLZ]
2751
2826
+
Lys
CTT
[ENA]
¡û
>W1511506381
JXMB01000013
Gammaproteobacteria
Haemophilus influenzae Hi378 [JXMB]
183619
183694
+
Lys
CTT
[ENA]
¡û
>W1511506491
JXMD01000021
Gammaproteobacteria
Haemophilus influenzae Hi394 [JXMD]
22270
22195
-
Lys
CTT
[ENA]
¡û
>W1511679622
LFFN01000006
Gammaproteobacteria
Haemophilus influenzae HI1988 [LFFN]
35754
35829
+
Lys
CTT
[ENA]
¡û
>W1511679837
LFFS01000001
Gammaproteobacteria
Haemophilus influenzae HI2116 [LFFS]
21321
21246
-
Lys
CTT
[ENA]
¡û
>W1610295350
FFIU01000003
Gammaproteobacteria
Haemophilus influenzae [FFIU]
208305
208380
+
Lys
CTT
[ENA]
¡û
>W1610621765
LHSM01000002
Gammaproteobacteria
Haemophilus influenzae [LHSM]
110709
110784
+
Lys
CTT
[ENA]
¡û
>W1710295984
FFIU01000003
Gammaproteobacteria
Haemophilus influenzae [FFIU]
208305
208380
+
Lys
CTT
[ENA]
¡û
>W1710752692
LHSM01000002
Gammaproteobacteria
Haemophilus influenzae [LHSM]
110709
110784
+
Lys
CTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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