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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.282697 (137 seq.)
>WENV180207502
OBAI01010198
[OBAI] human gut metagenome; human gut
1792
1718
-
Arg
TCT
[ENA]
¡û
>WENV180240327
OBDC01014168
[OBDC] human gut metagenome; human gut
61
135
+
Arg
TCT
[ENA]
¡û
>WENV180244683
OBDM01000023
[OBDM] human gut metagenome; human gut
10049
9975
-
Arg
TCT
[ENA]
¡û
>WENV180246871
OBDQ01018312
[OBDQ] human gut metagenome; human gut
61
135
+
Arg
TCT
[ENA]
¡û
>WENV180528093
OCHJ01001373
[OCHJ] human gut metagenome; human gut
17033
17107
+
Arg
TCT
[ENA]
¡û
>WENV180535273
OCHN01000126
[OCHN] human gut metagenome; human gut
29544
29470
-
Arg
TCT
[ENA]
¡û
>WENV180539464
OCHP01028395
[OCHP] human gut metagenome; human gut
68
142
+
Arg
TCT
[ENA]
¡û
>WENV180545034
OCIS01020226
[OCIS] human gut metagenome; human gut
551
477
-
Arg
TCT
[ENA]
¡û
>WENV180546523
OCIU01001958
[OCIU] human gut metagenome; human gut
2011
2085
+
Arg
TCT
[ENA]
¡û
>WENV180558064
OCJY01000457
[OCJY] human gut metagenome; human gut
3917
3843
-
Arg
TCT
[ENA]
¡û
>WENV180616762
OCQA01000833
[OCQA] human gut metagenome; human gut
551
477
-
Arg
TCT
[ENA]
¡û
>WENV180628107
OCQO01040968
[OCQO] human gut metagenome; human gut
68
142
+
Arg
TCT
[ENA]
¡û
>WENV180677149
OCVV011606961
[OCVV] gut metagenome; gut
127
51
-
Arg
TCT
[ENA]
¡û
>WENV180677150
OCVV011606961
[OCVV] gut metagenome; gut
127
51
-
Arg
TCT
[ENA]
¡û
>WENV180817170
ODJQ01000127
[ODJQ] human metagenome; G_DNA_Stool
55885
55959
+
Arg
TCT
[ENA]
¡û
>WENV180892564
ODMR01000526
[ODMR] human metagenome; G_DNA_Stool
26377
26451
+
Arg
TCT
[ENA]
¡û
>WENV180941931
ODTZ01023937
[ODTZ] human metagenome; G_DNA_Stool
521
595
+
Arg
TCT
[ENA]
¡û
>WENV181028376
ODXE01001910
[ODXE] human metagenome; G_DNA_Stool
6755
6681
-
Arg
TCT
[ENA]
¡û
>WENV181435897
OGDF01007688
[OGDF] human gut metagenome; human gut
6604
6678
+
Arg
TCT
[ENA]
¡û
>WENV181450346
OGDY01000375
[OGDY] metagenome; Human gut stool
19181
19107
-
Arg
TCT
[ENA]
¡û
>WENV181513518
OGGU01007824
[OGGU] metagenome; Human gut stool
3358
3284
-
Arg
TCT
[ENA]
¡û
>WENV181611682
OGLS01000057
[OGLS] metagenome; Human gut stool
90314
90240
-
Arg
TCT
[ENA]
¡û
>WENV181658124
OGOD01010591
[OGOD] metagenome; Human gut stool
131
57
-
Arg
TCT
[ENA]
¡û
>WENV181661409
OGOG01002782
[OGOG] human gut metagenome; faeces
4192
4266
+
Arg
TCT
[ENA]
¡û
>WENV181682411
OGOU01008243
[OGOU] human gut metagenome; faeces
1680
1754
+
Arg
TCT
[ENA]
¡û
>WENV181685849
OGOW01002080
[OGOW] human gut metagenome; faeces
14461
14535
+
Arg
TCT
[ENA]
¡û
>WENV181706585
OGPL01001232
[OGPL] human gut metagenome; faeces
20089
20015
-
Arg
TCT
[ENA]
¡û
>WENV181750492
OGQP01005739
[OGQP] human gut metagenome; faeces
1989
2063
+
Arg
TCT
[ENA]
¡û
>WENV181768487
OGRA01002424
[OGRA] human gut metagenome; faeces
9222
9296
+
Arg
TCT
[ENA]
¡û
>WENV181824306
OGUK01000849
[OGUK] human gut metagenome; faeces
13210
13136
-
Arg
TCT
[ENA]
¡û
>WENV181829067
OGUN01005105
[OGUN] human gut metagenome; faeces
3719
3793
+
Arg
TCT
[ENA]
¡û
>WENV181830130
OGUO01000570
[OGUO] human gut metagenome; faeces
20535
20609
+
Arg
TCT
[ENA]
¡û
>WENV181863022
OGWT01000263
[OGWT] human gut metagenome; faeces
27302
27376
+
Arg
TCT
[ENA]
¡û
>WENV181865969
OGWV01000770
[OGWV] human gut metagenome; faeces
1462
1536
+
Arg
TCT
[ENA]
¡û
>WENV181955401
OGZK01003104
[OGZK] human gut metagenome; faeces
4629
4703
+
Arg
TCT
[ENA]
¡û
>WENV181960937
OGZO01002125
[OGZO] human gut metagenome; faeces
11493
11567
+
Arg
TCT
[ENA]
¡û
>WENV181977505
OHAE01000073
[OHAE] human gut metagenome; faeces
75775
75701
-
Arg
TCT
[ENA]
¡û
>WENV181985212
OHAJ01001277
[OHAJ] human gut metagenome; faeces
14224
14298
+
Arg
TCT
[ENA]
¡û
>WENV182003542
OHBD01000193
[OHBD] human gut metagenome; feces
27683
27757
+
Arg
TCT
[ENA]
¡û
>WENV182051588
OHEG01002209
[OHEG] human gut metagenome; feces
6456
6530
+
Arg
TCT
[ENA]
¡û
>WENV182059627
OHER01000148
[OHER] human gut metagenome; feces
294
220
-
Arg
TCT
[ENA]
¡û
>WENV182061005
OHET01000834
[OHET] human gut metagenome; feces
7081
7155
+
Arg
TCT
[ENA]
¡û
>WENV182066728
OHFC01006359
[OHFC] human gut metagenome; feces
1167
1241
+
Arg
TCT
[ENA]
¡û
>WENV182066998
OHFD01000072
[OHFD] human gut metagenome; feces
3164
3238
+
Arg
TCT
[ENA]
¡û
>WENV182091909
OHHG01000102
[OHHG] human gut metagenome; feces
1735
1661
-
Arg
TCT
[ENA]
¡û
>WENV182097182
OHHO01009103
[OHHO] human gut metagenome; feces
1152
1226
+
Arg
TCT
[ENA]
¡û
>WENV182111498
OHIS01000057
[OHIS] human gut metagenome; feces
3331
3405
+
Arg
TCT
[ENA]
¡û
>WENV182112409
OHIU01007048
[OHIU] human gut metagenome; feces
1133
1207
+
Arg
TCT
[ENA]
¡û
>WENV182133552
OHKG01002121
[OHKG] human gut metagenome; feces
4339
4413
+
Arg
TCT
[ENA]
¡û
>WENV182134759
OHKI01000747
[OHKI] human gut metagenome; feces
1654
1728
+
Arg
TCT
[ENA]
¡û
>WENV182137492
OHKL01002331
[OHKL] human gut metagenome; feces
3040
3114
+
Arg
TCT
[ENA]
¡û
>WENV182186964
OHOJ01017568
[OHOJ] human gut metagenome; feces
337
411
+
Arg
TCT
[ENA]
¡û
>WENV182189246
OHOO01000209
[OHOO] human gut metagenome; feces
12524
12598
+
Arg
TCT
[ENA]
¡û
>WENV182224720
OHRC01002403
[OHRC] human gut metagenome; feces
2256
2330
+
Arg
TCT
[ENA]
¡û
>WENV182229867
OHRJ01014714
[OHRJ] human gut metagenome; feces
133
59
-
Arg
TCT
[ENA]
¡û
>WENV182232838
OHRP01000265
[OHRP] human gut metagenome; feces
1701
1627
-
Arg
TCT
[ENA]
¡û
>WENV182248112
OHSO01002369
[OHSO] human gut metagenome; feces
1113
1039
-
Arg
TCT
[ENA]
¡û
>WENV182267842
OHUA01002245
[OHUA] human gut metagenome; feces
5141
5067
-
Arg
TCT
[ENA]
¡û
>WENV182270287
OHUE01000902
[OHUE] human gut metagenome; feces
5248
5322
+
Arg
TCT
[ENA]
¡û
>WENV182396959
OIEM01005446
[OIEM] human gut metagenome; human gut
2961
2887
-
Arg
TCT
[ENA]
¡û
>WENV182439003
OIJQ01000259
[OIJQ] human gut metagenome; human gut
9971
9897
-
Arg
TCT
[ENA]
¡û
>WENV182464974
OIOL01001771
[OIOL] human gut metagenome; human gut
1643
1717
+
Arg
TCT
[ENA]
¡û
>WENV182470319
OIPG01001359
[OIPG] human gut metagenome; human gut
957
1031
+
Arg
TCT
[ENA]
¡û
>WENV182470591
OIPH01000218
[OIPH] human gut metagenome; human gut
7960
8034
+
Arg
TCT
[ENA]
¡û
>WENV182472939
OIPR01002222
[OIPR] human gut metagenome; human gut
1626
1700
+
Arg
TCT
[ENA]
¡û
>WENV182485989
OIRR01000421
[OIRR] human gut metagenome; human gut
2438
2364
-
Arg
TCT
[ENA]
¡û
>WENV182494806
OISZ01001807
[OISZ] human gut metagenome; human gut
3558
3632
+
Arg
TCT
[ENA]
¡û
>WENV182523030
OIWS01003234
[OIWS] human gut metagenome; faeces
1956
2030
+
Arg
TCT
[ENA]
¡û
>WENV182608393
OJJV01000110
[OJJV] metagenome; faeces
8742
8816
+
Arg
TCT
[ENA]
¡û
>WENV182612176
OJJY01000048
[OJJY] metagenome; faeces
38886
38960
+
Arg
TCT
[ENA]
¡û
>WENV182614717
OJKC01000308
[OJKC] metagenome; faeces
30665
30591
-
Arg
TCT
[ENA]
¡û
>WENV182619916
OJKI01000182
[OJKI] metagenome; faeces
24480
24406
-
Arg
TCT
[ENA]
¡û
>WENV182633287
OJKY01000276
[OJKY] metagenome; faeces
2158
2232
+
Arg
TCT
[ENA]
¡û
>WENV182672196
OJNN01000138
[OJNN] human gut metagenome; human gut
29312
29238
-
Arg
TCT
[ENA]
¡û
>WENV182678107
OJNS01001306
[OJNS] human gut metagenome; human gut
9854
9780
-
Arg
TCT
[ENA]
¡û
>WENV182700887
OJOP01000668
[OJOP] human gut metagenome; human gut
3040
3114
+
Arg
TCT
[ENA]
¡û
>WENV182708678
OJPA01001062
[OJPA] human gut metagenome; stool sample
450
376
-
Arg
TCT
[ENA]
¡û
>WENV182717581
OJPL01000194
[OJPL] human gut metagenome; stool sample
5054
5128
+
Arg
TCT
[ENA]
¡û
>WENV182728001
OJPW01000712
[OJPW] human gut metagenome; stool sample
4301
4227
-
Arg
TCT
[ENA]
¡û
>WENV182757953
OJRI01000041
[OJRI] human gut metagenome; stool sample
88667
88593
-
Arg
TCT
[ENA]
¡û
>WENV182766113
OJRT01001003
[OJRT] human gut metagenome; stool sample
1502
1428
-
Arg
TCT
[ENA]
¡û
>WENV182870069
OKRU01000065
[OKRU] human gut metagenome; faeces
46719
46793
+
Arg
TCT
[ENA]
¡û
>WENV182876619
OKRY01000603
[OKRY] human gut metagenome; faeces
3666
3592
-
Arg
TCT
[ENA]
¡û
>WENV182879713
OKRZ01025888
[OKRZ] human gut metagenome; faeces
1643
1717
+
Arg
TCT
[ENA]
¡û
>WENV182905553
OKTC01000222
[OKTC] human gut metagenome; feces
18432
18358
-
Arg
TCT
[ENA]
¡û
>WENV182910686
OKTJ01004830
[OKTJ] human gut metagenome; feces
2752
2678
-
Arg
TCT
[ENA]
¡û
>WENV182913816
OKTO01002532
[OKTO] human gut metagenome; feces
4290
4364
+
Arg
TCT
[ENA]
¡û
>WENV182958630
OKWH01031351
[OKWH] human gut metagenome; human gut
32
106
+
Arg
TCT
[ENA]
¡û
>WENV182976721
OKYB01000562
[OKYB] human gut metagenome; human gut
675
601
-
Arg
TCT
[ENA]
¡û
>WENV182987793
OLAE01001059
[OLAE] human gut metagenome; human gut
530
456
-
Arg
TCT
[ENA]
¡û
>WENV182990661
OLAN01000358
[OLAN] human gut metagenome; human gut
3354
3280
-
Arg
TCT
[ENA]
¡û
>WENV182995351
OLBH01000465
[OLBH] human gut metagenome; human gut
7674
7600
-
Arg
TCT
[ENA]
¡û
>WENV183072610
OLIT01003062
[OLIT] human gut metagenome; feces
3161
3235
+
Arg
TCT
[ENA]
¡û
>WENV183085275
OLJF01002797
[OLJF] metagenome; faeces
5950
5876
-
Arg
TCT
[ENA]
¡û
>WENV183144687
OLOL01005990
[OLOL] human gut metagenome; faeces
5001
5075
+
Arg
TCT
[ENA]
¡û
>WENV183150397
OLOP01001046
[OLOP] human gut metagenome; faeces
9893
9819
-
Arg
TCT
[ENA]
¡û
>WENV183169388
OLPA01003121
[OLPA] human gut metagenome; faeces
9962
9888
-
Arg
TCT
[ENA]
¡û
>WENV183199993
OLPW01000554
[OLPW] human gut metagenome; faeces
10144
10218
+
Arg
TCT
[ENA]
¡û
>WENV183220973
OLQL01001138
[OLQL] human gut metagenome; faeces
13619
13693
+
Arg
TCT
[ENA]
¡û
>WENV183234063
OLQV01010118
[OLQV] human gut metagenome; faeces
1979
1905
-
Arg
TCT
[ENA]
¡û
>WENV183261983
OLRQ01000347
[OLRQ] human gut metagenome; faeces
31631
31557
-
Arg
TCT
[ENA]
¡û
>WENV183269954
OLRV01002296
[OLRV] human gut metagenome; faeces
4360
4286
-
Arg
TCT
[ENA]
¡û
>WENV183282348
OLSC01002097
[OLSC] human gut metagenome; faeces
9945
9871
-
Arg
TCT
[ENA]
¡û
>WENV183310421
OLVO01000254
[OLVO] human gut metagenome; faeces
20873
20947
+
Arg
TCT
[ENA]
¡û
>WENV183321706
OLVX01000033
[OLVX] human gut metagenome; faeces
44026
44100
+
Arg
TCT
[ENA]
¡û
>WENV183333332
OLWE01000276
[OLWE] human gut metagenome; feces
12011
12085
+
Arg
TCT
[ENA]
¡û
>WENV183362088
OLXK01001874
[OLXK] human gut metagenome; feces
3301
3227
-
Arg
TCT
[ENA]
¡û
>WENV183363143
OLXL01000012
[OLXL] human gut metagenome; feces
39346
39420
+
Arg
TCT
[ENA]
¡û
>WENV183374377
OLXZ01001009
[OLXZ] human gut metagenome; feces
3489
3415
-
Arg
TCT
[ENA]
¡û
>WENV183381423
OLYJ01006834
[OLYJ] human gut metagenome; feces
1985
2059
+
Arg
TCT
[ENA]
¡û
>WENV183382273
OLYL01000137
[OLYL] human gut metagenome; feces
26378
26452
+
Arg
TCT
[ENA]
¡û
>WENV183421992
OMBD01001931
[OMBD] human gut metagenome; feces
3043
2969
-
Arg
TCT
[ENA]
¡û
>WENV183427083
OMBM01003831
[OMBM] human gut metagenome; feces
816
742
-
Arg
TCT
[ENA]
¡û
>WENV183438456
OMCF01000137
[OMCF] human gut metagenome; feces
26378
26452
+
Arg
TCT
[ENA]
¡û
>WENV183439434
OMCG01000274
[OMCG] human gut metagenome; feces
34890
34816
-
Arg
TCT
[ENA]
¡û
>WENV183442498
OMCM01000284
[OMCM] human gut metagenome; feces
19746
19820
+
Arg
TCT
[ENA]
¡û
>WENV183444455
OMCO01005770
[OMCO] human gut metagenome; feces
2242
2316
+
Arg
TCT
[ENA]
¡û
>WENV183445124
OMCP01002219
[OMCP] human gut metagenome; feces
3312
3238
-
Arg
TCT
[ENA]
¡û
>WENV183456975
OMDL01000218
[OMDL] human gut metagenome; feces
34738
34664
-
Arg
TCT
[ENA]
¡û
>WENV183458041
OMDM01000612
[OMDM] human gut metagenome; feces
3336
3262
-
Arg
TCT
[ENA]
¡û
>WENV183506345
OMGY01000646
[OMGY] human gut metagenome; human gut
34471
34397
-
Arg
TCT
[ENA]
¡û
>WENV183526242
ONZV01000104
[ONZV] human gut metagenome; human gut
5081
5155
+
Arg
TCT
[ENA]
¡û
>WENV183568628
OOCB01004908
[OOCB] human gut metagenome; human gut
7068
7142
+
Arg
TCT
[ENA]
¡û
>WENV183582822
OOCP01005385
[OOCP] human gut metagenome; human gut
2312
2386
+
Arg
TCT
[ENA]
¡û
>WENV183592680
OOCZ01001514
[OOCZ] human gut metagenome; human gut
551
477
-
Arg
TCT
[ENA]
¡û
>WENV183607370
OODO01005202
[OODO] human gut metagenome; human gut
4657
4731
+
Arg
TCT
[ENA]
¡û
>WENV183641597
OQVL01055739
[OQVL] human gut metagenome; human gut
905
979
+
Arg
TCT
[ENA]
¡û
>WENV183779153
PPYF01130245
[PPYF] human gut metagenome; stool from patient with Crohn's disease
5386
5460
+
Arg
TCT
[ENA]
¡û
>WENV170040832
CDYS01049107
[CDYS] gut metagenome; human stools
3402
3476
+
Arg
TCT
[ENA]
¡û
>WENV170046093
CDYY01021086
[CDYY] gut metagenome; human stools
10043
9969
-
Arg
TCT
[ENA]
¡û
>WENV170071966
CDZR01014266
[CDZR] gut metagenome; human stools
10915
10841
-
Arg
TCT
[ENA]
¡û
>WENV170081877
CDZY01032193
[CDZY] gut metagenome; human stools
35198
35124
-
Arg
TCT
[ENA]
¡û
>WENV170083627
CEAA01039712
[CEAA] gut metagenome; human stools
12661
12735
+
Arg
TCT
[ENA]
¡û
>WENV170093700
CEAH01035970
[CEAH] gut metagenome; human stools
5387
5461
+
Arg
TCT
[ENA]
¡û
>WENV170101459
CEAR01033572
[CEAR] gut metagenome; human stools
43796
43722
-
Arg
TCT
[ENA]
¡û
>WENV170108195
CECA01016624
[CECA] gut metagenome; human stools
3311
3237
-
Arg
TCT
[ENA]
¡û
>WENV170110753
CECF01042885
[CECF] gut metagenome; human stools
2061
2135
+
Arg
TCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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