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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.284286 (102 seq.)
>W1711066609
LSCZ01000025
Actinomycetota
Corynebacterium sp. DNF00584 [LSCZ]
215910
215985
+
Thr
TGT
[ENA]
¡û
>W1711080524
LSRB01000011
Actinomycetota
Corynebacterium sp. CMW7794 [LSRB]
8780
8705
-
Thr
TGT
[ENA]
¡û
>W1711086647
LSXK01000006
Actinomycetota
Corynebacterium diphtheriae bv. mitis [LSXK]
63255
63180
-
Thr
TGT
[ENA]
¡û
>W1711095193
LTGO01000095
Actinomycetota
Corynebacterium sp. HMSC067D03 [LTGO]
105150
105223
+
Thr
TGT
[ENA]
¡û
>W1711096431
LTHS01000060
Actinomycetota
Corynebacterium sp. HMSC077B05 [LTHS]
126201
126276
+
Thr
TGT
[ENA]
¡û
>W1711096616
LTHX01000062
Actinomycetota
Corynebacterium sp. HMSC055D05 [LTHX]
41547
41620
+
Thr
TGT
[ENA]
¡û
>W1711099115
LTKF01000004
Actinomycetota
Corynebacterium sp. HMSC072G08 [LTKF]
59652
59577
-
Thr
TGT
[ENA]
¡û
>W1711103663
LTOW01000111
Actinomycetota
Corynebacterium sp. HMSC070H05 [LTOW]
22119
22046
-
Thr
TGT
[ENA]
¡û
>W1711105928
LTRH01000036
Actinomycetota
Corynebacterium sp. HMSC036E10 [LTRH]
22327
22254
-
Thr
TGT
[ENA]
¡û
>W1711106565
LTRY01000053
Actinomycetota
Corynebacterium sp. HMSC034E11 [LTRY]
61141
61214
+
Thr
TGT
[ENA]
¡û
>W1711106664
LTSB01000042
Actinomycetota
Corynebacterium sp. HMSC034B08 [LTSB]
22217
22144
-
Thr
TGT
[ENA]
¡û
>W1711107211
LTSO01000053
Actinomycetota
Corynebacterium sp. HMSC075D04 [LTSO]
41464
41537
+
Thr
TGT
[ENA]
¡û
>W1711108487
LTTU01000035
Actinomycetota
Corynebacterium sp. HMSC065A05 [LTTU]
217381
217456
+
Thr
TGT
[ENA]
¡û
>W1711108843
LTUC01000086
Actinomycetota
Corynebacterium sp. HMSC071B10 [LTUC]
21194
21267
+
Thr
TGT
[ENA]
¡û
>W1711109372
LTUP01000047
Actinomycetota
Corynebacterium sp. HMSC077D10 [LTUP]
8104
8029
-
Thr
TGT
[ENA]
¡û
>W1711109451
LTUR01000033
Actinomycetota
Corynebacterium sp. HMSC078C09 [LTUR]
36080
36155
+
Thr
TGT
[ENA]
¡û
>W1711114726
LTZO01000014
Actinomycetota
Corynebacterium sp. HMSC11D10 [LTZO]
22082
22009
-
Thr
TGT
[ENA]
¡û
>W1711185874
LWNT01000052
Actinomycetota
Corynebacterium sp. HMSC08F01 [LWNT]
22374
22301
-
Thr
TGT
[ENA]
¡û
>W1711186428
LWOF01000036
Actinomycetota
Corynebacterium sp. HMSC06C06 [LWOF]
58511
58436
-
Thr
TGT
[ENA]
¡û
>W1711186609
LWOJ01000001
Actinomycetota
Corynebacterium sp. HMSC05D08 [LWOJ]
2162
2237
+
Thr
TGT
[ENA]
¡û
>W1711186775
LWOM01000053
Actinomycetota
Corynebacterium sp. HMSC05C01 [LWOM]
55470
55543
+
Thr
TGT
[ENA]
¡û
>W1711435961
MIOJ01000008
Actinomycetota
Corynebacterium diphtheriae [MIOJ]
72311
72386
+
Thr
TGT
[ENA]
¡û
>W1711511698
MLCQ01000019
Actinomycetota
Corynebacterium sp. NML140438 [MLCQ]
35772
35699
-
Thr
TGT
[ENA]
¡û
>W1711511733
MLCR01000010
Actinomycetota
Corynebacterium sp. NML120713 [MLCR]
260367
260440
+
Thr
TGT
[ENA]
¡û
>W1711517394
MLJM01000053
Actinomycetota
Corynebacterium sp. HMSC074A01 [MLJM]
4447
4374
-
Thr
TGT
[ENA]
¡û
>C171002075
CP009249
Actinomycetota
Corynebacterium phocae M408/89/1 [CP009249]
517715
517790
+
Thr
TGT
-
¡û
>C171064707
CP017639
Actinomycetota
Corynebacterium sp. NML98-0116 [CP017639]
457699
457772
+
Thr
TGT
-
¡û
>C171117415
CP021252
Actinomycetota
Corynebacterium striatum KC-Na-01 [CP021252]
604799
604874
+
Thr
TGT
-
¡û
>W131159192
AQUV01000004
Actinomycetota
Corynebacterium capitovis DSM 44611 [AQUV]
37293
37220
-
Thr
TGT
[ENA]
¡û
>W131164504
ARAV01000005
Actinomycetota
Corynebacterium lubricantis DSM 45231 [ARAV]
129371
129444
+
Thr
TGT
[ENA]
¡û
>W131169251
AREP01000011
Actinomycetota
Corynebacterium pilosum DSM 20521 [AREP]
64138
64065
-
Thr
TGT
[ENA]
¡û
>C005549
BA000035
Actinomycetota
Corynebacterium efficiens YS-314 [BA000035]
2672447
2672375
-
Thr
TGT
[Ensembl]
¡û
>W141243581
CAJP01000045
Actinomycetota
Corynebacterium timonense 5401744 [CAJP]
3782
3707
-
Thr
TGT
[ENA]
¡û
>WENV182643356
OJLU01003699
[OJLU] metagenome; surface
72
-1
-
Thr
TGT
[ENA]
¢þ
>WENV182643556
OJLW01000066
[OJLW] metagenome; surface
36347
36274
-
Thr
TGT
[ENA]
¢þ
>WENV182643559
OJLW01000071
[OJLW] metagenome; surface
22156
22083
-
Thr
TGT
[ENA]
¢þ
>WENV182645859
OJLZ01006360
[OJLZ] metagenome; surface
2289
2361
+
Thr
TGT
[ENA]
¢þ
>WENV182646599
OJMC01000020
[OJMC] metagenome; surface
2183
2256
+
Thr
TGT
[ENA]
¢þ
>WENV182815222
OJYP01000500
[OJYP] human gut metagenome; human gut
388
315
-
Thr
TGT
[ENA]
¢þ
>WENV182835373
OKFN01000005
[OKFN] human gut metagenome; human gut
75764
75837
+
Thr
TGT
[ENA]
¢þ
>WENV182835847
OKFR01001908
[OKFR] human gut metagenome; human gut
112
39
-
Thr
TGT
[ENA]
¢þ
>WENV182863549
OKPT01004068
[OKPT] human gut metagenome; human gut
565
638
+
Thr
TGT
[ENA]
¢þ
>C181108778
CP024931
Actinomycetota
Corynebacterium striatum 215 [CP024931]
2785460
2785533
+
Thr
TGT
-
¡û
>C181108848
CP024932
Actinomycetota
Corynebacterium striatum 216 [CP024932]
1619516
1619443
-
Thr
TGT
-
¡û
>C181143894
CP026948
Actinomycetota
Corynebacterium liangguodongii 2184 [CP026948]
1932799
1932724
-
Thr
TGT
-
¡û
>C181144759
CP027001
Actinomycetota
Corynebacterium camporealensis CIP 105508 [CP027001]
2063392
2063319
-
Thr
TGT
-
¡û
>C181211272
LS483404
Actinomycetota
Corynebacterium renale NCTC11140 [LS483404]
2312061
2311986
-
Thr
TGT
-
¡û
>C181215131
LS483464
Actinomycetota
Corynebacterium renale NCTC7448 [LS483464]
444412
444337
-
Thr
TGT
-
¡û
>W09122463
ACGE01000165
Actinomycetota
Corynebacterium striatum ATCC 6940 [ACGE]
10586
10661
+
Thr
TGT
[ENA]
¡û
>C181225930
LT906467
Actinomycetota
Corynebacterium imitans NCTC13015 [LT906467]
2188234
2188161
-
Thr
TGT
-
¡û
>C181226206
LT906473
Actinomycetota
Corynebacterium cystitidis NCTC11863 [LT906473]
222879
222952
+
Thr
TGT
-
¡û
>W09124027
ACHJ01000022
Actinomycetota
Corynebacterium lipophiloflavum DSM 44291 [ACHJ]
18983
19058
+
Thr
TGT
[ENA]
¡û
>W09127876
ACLI01000021
Actinomycetota
Corynebacterium efficiens YS-314 [ACLI]
27886
27959
+
Thr
TGT
[ENA]
¡û
>C191163648
CP039247
Actinomycetota
Corynebacterium endometrii LMM-1653 [CP039247]
2107509
2107436
-
Thr
TGT
-
¡û
>W1910180430
BJLD01000001
Actinomycetota
Corynebacterium striatum NBRC 15291 [BJLD]
77748
77675
-
Thr
TGT
[ENA]
¡û
>C141002614
CP003924
Actinomycetota
Corynebacterium maris DSM 45190 [CP003924]
2409024
2408949
-
Thr
TGT
[Ensembl]
¡û
>W1910598649
LBCN01000004
Actinomycetota
Corynebacterium striatum 2023 [LBCN]
267873
267800
-
Thr
TGT
[ENA]
¡û
>W1910640585
LTBE01000016
Actinomycetota
Corynebacterium striatum 2023 [LTBE]
57825
57752
-
Thr
TGT
[ENA]
¡û
>W1910640653
LTBF01000025
Actinomycetota
Corynebacterium striatum 2230 [LTBF]
64307
64234
-
Thr
TGT
[ENA]
¡û
>W1910640688
LTBG01000008
Actinomycetota
Corynebacterium striatum 2245 [LTBG]
58497
58424
-
Thr
TGT
[ENA]
¡û
>W1910640716
LTBH01000006
Actinomycetota
Corynebacterium striatum 2247 [LTBH]
153396
153469
+
Thr
TGT
[ENA]
¡û
>W1911179032
NQMQ01000022
Actinomycetota
Corynebacterium hadale NBT06-6 [NQMQ]
44876
44801
-
Thr
TGT
[ENA]
¡û
>W1911204366
NRIL01000016
Actinomycetota
Corynebacterium striatum 2130 [NRIL]
187128
187201
+
Thr
TGT
[ENA]
¡û
>W1911204403
NRIM01000009
Actinomycetota
Corynebacterium striatum 2237 [NRIM]
153477
153550
+
Thr
TGT
[ENA]
¡û
>W1911204466
NRIN01000006
Actinomycetota
Corynebacterium striatum 2296 [NRIN]
154275
154348
+
Thr
TGT
[ENA]
¡û
>W1911204525
NRIO01000008
Actinomycetota
Corynebacterium striatum 2308 [NRIO]
100033
100106
+
Thr
TGT
[ENA]
¡û
>W1911204593
NRIP01000006
Actinomycetota
Corynebacterium striatum 2425 [NRIP]
160536
160609
+
Thr
TGT
[ENA]
¡û
>W1911243342
NSGK01000010
Actinomycetota
Corynebacterium sp. NML 150383 [NSGK]
22597
22672
+
Thr
TGT
[ENA]
¡û
>W1911243394
NSGL01000003
Actinomycetota
Corynebacterium sp. NML 120412 [NSGL]
179312
179387
+
Thr
TGT
[ENA]
¡û
>W1911243438
NSGM01000003
Actinomycetota
Corynebacterium hadale NML00-0156 [NSGM]
66566
66491
-
Thr
TGT
[ENA]
¡û
>W1911243501
NSGN01000009
Actinomycetota
Corynebacterium hadale NML99-0020 [NSGN]
59683
59608
-
Thr
TGT
[ENA]
¡û
>W1911243559
NSGO01000010
Actinomycetota
Corynebacterium hadale NML93-0607 [NSGO]
64240
64165
-
Thr
TGT
[ENA]
¡û
>W1911243605
NSGP01000012
Actinomycetota
Corynebacterium hadale NML92-0415 [NSGP]
22502
22577
+
Thr
TGT
[ENA]
¡û
>W1911551217
OVSI01000009
Actinomycetota
Corynebacterium senegalense Marseille-P4329 [OVSI]
32848
32923
+
Thr
TGT
[ENA]
¡û
>W1810058117
PDJF01000001
Actinomycetota
Corynebacterium renale DSM 20688 [PDJF]
1144336
1144411
+
Thr
TGT
[ENA]
¡û
>W1810187456
PKHP01000004
Actinomycetota
Corynebacterium coyleae UMB0989 [PKHP]
22364
22291
-
Thr
TGT
[ENA]
¡û
>W1810187520
PKHQ01000007
Actinomycetota
Corynebacterium coyleae UMB0147 [PKHQ]
113372
113445
+
Thr
TGT
[ENA]
¡û
>W1810568886
QEEY01000004
Actinomycetota
Corynebacterium liangguodongii 2185 [QEEY]
42790
42715
-
Thr
TGT
[ENA]
¡û
>C151045513
CP009211
Actinomycetota
Corynebacterium imitans DSM 44264 [CP009211]
2105960
2105887
-
Thr
TGT
[Ensembl]
¡û
>C151079714
CP011311
Actinomycetota
Corynebacterium camporealensis DSM 44610 [CP011311]
2064901
2064826
-
Thr
TGT
[Ensembl]
¡û
>C151084350
CP011541
Actinomycetota
Corynebacterium epidermidicanis DSM 45586 [CP011541]
2234217
2234142
-
Thr
TGT
[Ensembl]
¡û
>W1510562551
CTEG01000030
Actinomycetota
Corynebacterium striatum BM4687 [CTEG]
58003
57928
-
Thr
TGT
[ENA]
¡û
>W1511356268
JRUB01000001
Actinomycetota
Corynebacterium camporealensis CIP 105508 [JRUB]
158207
158282
+
Thr
TGT
[ENA]
¡û
>W1511438089
JULV01000149
Actinomycetota
Corynebacterium striatum 963_CAUR [JULV]
55060
54985
-
Thr
TGT
[ENA]
¡û
>W1511438113
JULW01000065
Actinomycetota
Corynebacterium striatum 962_CAUR [JULW]
2191
2266
+
Thr
TGT
[ENA]
¡û
>W1511443057
JUSN01000023
Actinomycetota
Corynebacterium striatum 797_CAUR [JUSN]
4107
4032
-
Thr
TGT
[ENA]
¡û
>W1511449447
JVBA01000070
Actinomycetota
Corynebacterium striatum 587_CAUR [JVBA]
2172
2247
+
Thr
TGT
[ENA]
¡û
>W1511451285
JVCW01000065
Actinomycetota
Corynebacterium striatum 542_CAUR [JVCW]
60549
60474
-
Thr
TGT
[ENA]
¡û
>W1511467818
JVTL01000013
Actinomycetota
Corynebacterium striatum 1329_CAUR [JVTL]
172108
172183
+
Thr
TGT
[ENA]
¡û
>W1511467902
JVTN01000021
Actinomycetota
Corynebacterium striatum 1327_CAUR [JVTN]
192031
192106
+
Thr
TGT
[ENA]
¡û
>W1511585582
LAYR01000005
Actinomycetota
Corynebacterium striatum 1961 [LAYR]
387057
386982
-
Thr
TGT
[ENA]
¡û
>W1511644846
LDYD01000011
Actinomycetota
Corynebacterium pilosum CIP103422 [LDYD]
31512
31585
+
Thr
TGT
[ENA]
¡û
>W1511644894
LDYE01000008
Actinomycetota
Corynebacterium renale CIP 52.96 [LDYE]
69755
69680
-
Thr
TGT
[ENA]
¡û
>C121008649
CP003214
Actinomycetota
Corynebacterium diphtheriae HC03 [CP003214]
1953092
1953017
-
Thr
TGT
[Ensembl]
¡û
>W1610436790
FJVG01000014
Actinomycetota
Corynebacterium bouchesdurhonense SN14 [FJVG]
35101
35026
-
Thr
TGT
[ENA]
¡û
>W1610507453
FLTI01000011
Actinomycetota
Corynebacterium phoceense MC1 [FLTI]
140232
140157
-
Thr
TGT
[ENA]
¡û
>W1610907179
LSCZ01000025
Actinomycetota
Corynebacterium sp. DNF00584 [LSCZ]
215910
215985
+
Thr
TGT
[ENA]
¡û
>W1610919391
LSRB01000011
Actinomycetota
Corynebacterium sp. CMW7794 [LSRB]
8780
8705
-
Thr
TGT
[ENA]
¡û
>W1710436526
FJVG01000014
Actinomycetota
Corynebacterium bouchesdurhonense SN14 [FJVG]
35101
35026
-
Thr
TGT
[ENA]
¡û
>W1710499671
FLTI01000011
Actinomycetota
Corynebacterium phoceense MC1 [FLTI]
140232
140157
-
Thr
TGT
[ENA]
¡û
>W1710534350
FNRU01000002
Actinomycetota
Corynebacterium coyleae [FNRU]
599079
599006
-
Thr
TGT
[ENA]
¡û
>W1710552168
FOGQ01000018
Actinomycetota
Corynebacterium cystitidis DSM 20524 [FOGQ]
23690
23763
+
Thr
TGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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