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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.284955 (8 seq.)
>W1711377701
MDZD01000019
Bacillota
Sulfobacillus thermosulfidooxidans [MDZD]
9935
10010
+
Gly
CCC
[ENA]
¡û
>W1711377748
MDZE01000022
Bacillota
Sulfobacillus thermosulfidooxidans [MDZE]
335736
335661
-
Gly
CCC
[ENA]
¡û
>W1711377786
MDZF01000019
Bacillota
Sulfobacillus thermosulfidooxidans [MDZF]
71670
71595
-
Gly
CCC
[ENA]
¡û
>W141135865
AWEW01000029
Bacillota
Sulfobacillus thermosulfidooxidans ST [AWEW]
36989
36914
-
Gly
CCC
[ENA]
¡û
>W1911411234
NWUL01000011
Bacillota
Sulfobacillus sp. hq2 [NWUL]
61160
61235
+
Gly
CCC
[ENA]
¡û
>W1511705561
LGRO01000001
Bacillota
Sulfobacillus thermosulfidooxidans CBAR-13 [LGRO]
2188966
2188891
-
Gly
CCC
[ENA]
¡û
>W121119335
ALWJ01000043
Bacillota
Sulfobacillus thermosulfidooxidans str. Cutipay [ALWJ]
88936
88861
-
Gly
CCC
[ENA]
¡û
>W1710605493
FWWY01000001
Bacillota
Sulfobacillus thermosulfidooxidans DSM 9293 [FWWY]
1105032
1104957
-
Gly
CCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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