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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.285066 (6 seq.)
>W1711394120
MEPW01000043
Bdellovibrionota
Bdellovibrionales bacterium RIFOXYA1_FULL_36_14 [MEPW]
7286
7211
-
Gly
TCC
[ENA]
¡û
>W1711394138
MEPX01000027
Bdellovibrionota
Bdellovibrionales bacterium RIFOXYA1_FULL_38_20 [MEPX]
32796
32871
+
Gly
TCC
[ENA]
¡û
>W1711394171
MEPY01000057
Bdellovibrionota
Bdellovibrionales bacterium RIFOXYB1_FULL_37_110 [MEPY]
32758
32833
+
Gly
TCC
[ENA]
¡û
>W1711394230
MEQA01000127
Bdellovibrionota
Bdellovibrionales bacterium RIFOXYB2_FULL_36_6 [MEQA]
754
679
-
Gly
TCC
[ENA]
¡û
>W1711394269
MEQB01000045
Bdellovibrionota
Bdellovibrionales bacterium RIFOXYC1_FULL_37_79 [MEQB]
32751
32826
+
Gly
TCC
[ENA]
¡û
>W1711394434
MEQG01000043
Bdellovibrionota
Bdellovibrionales bacterium RIFOXYD1_FULL_36_51 [MEQG]
32708
32783
+
Gly
TCC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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