Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).

Download Sequence	Representative sequence of each cluster
View ClustalW result

Sort by Identical group No.

Sort by the number of tRNAs in the Identical group

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.285955 (134 seq.)
	>W1711055132	LRUI01000024	Gammaproteobacteria	Thalassotalea crassostreae LPB0090 [LRUI]	293	218	-	Asn	GTT	[ENA]	○
	>W1711055134	LRUI01000040	Gammaproteobacteria	Thalassotalea crassostreae LPB0090 [LRUI]	13	88	+	Asn	GTT	[ENA]	○
	>W1711078287	LSMS01000184	Gammaproteobacteria	Colwellia sp. Phe_37 [LSMS]	2439	2364	-	Asn	GTT	[ENA]	○
	>W1711078288	LSMS01000184	Gammaproteobacteria	Colwellia sp. Phe_37 [LSMS]	2307	2232	-	Asn	GTT	[ENA]	○
	>W1711078289	LSMS01000184	Gammaproteobacteria	Colwellia sp. Phe_37 [LSMS]	2183	2108	-	Asn	GTT	[ENA]	○
	>W1711624662	MPHL01000005	Gammaproteobacteria	Colwellia sp. UCD-KL20 [MPHL]	295094	295169	+	Asn	GTT	[ENA]	○
	>W1711624663	MPHL01000005	Gammaproteobacteria	Colwellia sp. UCD-KL20 [MPHL]	295353	295428	+	Asn	GTT	[ENA]	○
	>W1711624664	MPHL01000005	Gammaproteobacteria	Colwellia sp. UCD-KL20 [MPHL]	295480	295555	+	Asn	GTT	[ENA]	○
	>W1711767373	MUZU01000002	Gammaproteobacteria	Pseudocolwellia agarivorans QM50 [MUZU]	270766	270841	+	Asn	GTT	[ENA]	○
	>W1711767374	MUZU01000002	Gammaproteobacteria	Pseudocolwellia agarivorans QM50 [MUZU]	271033	271108	+	Asn	GTT	[ENA]	○
	>W1711767375	MUZU01000002	Gammaproteobacteria	Pseudocolwellia agarivorans QM50 [MUZU]	271159	271234	+	Asn	GTT	[ENA]	○
	>W1711767431	MUZV01000002	Gammaproteobacteria	Cognaticolwellia aestuarii [MUZV]	212114	212039	-	Asn	GTT	[ENA]	○
	>W1711767432	MUZV01000002	Gammaproteobacteria	Cognaticolwellia aestuarii [MUZV]	211981	211906	-	Asn	GTT	[ENA]	○
	>W1711767433	MUZV01000002	Gammaproteobacteria	Cognaticolwellia aestuarii [MUZV]	211857	211782	-	Asn	GTT	[ENA]	○
	>W1711947463	NBOC01000017	Gammaproteobacteria	Colwellia chukchiensis [NBOC]	60406	60481	+	Asn	GTT	[ENA]	○
	>W1711947464	NBOC01000017	Gammaproteobacteria	Colwellia chukchiensis [NBOC]	60689	60764	+	Asn	GTT	[ENA]	○
	>W1711947465	NBOC01000017	Gammaproteobacteria	Colwellia chukchiensis [NBOC]	60813	60888	+	Asn	GTT	[ENA]	○
	>W1711947488	NBOD01000003	Gammaproteobacteria	Cognaticolwellia aestuarii [NBOD]	296318	296243	-	Asn	GTT	[ENA]	○
	>W1711947489	NBOD01000003	Gammaproteobacteria	Cognaticolwellia aestuarii [NBOD]	296185	296110	-	Asn	GTT	[ENA]	○
	>W1711947490	NBOD01000003	Gammaproteobacteria	Cognaticolwellia aestuarii [NBOD]	296061	295986	-	Asn	GTT	[ENA]	○
	>W1711947592	NBOE01000011	Gammaproteobacteria	Colwellia polaris [NBOE]	143069	143144	+	Asn	GTT	[ENA]	○
	>W1711947593	NBOE01000011	Gammaproteobacteria	Colwellia polaris [NBOE]	143300	143375	+	Asn	GTT	[ENA]	○
	>W1711947594	NBOE01000011	Gammaproteobacteria	Colwellia polaris [NBOE]	143511	143586	+	Asn	GTT	[ENA]	○
	>W1711947665	NBOF01000004	Gammaproteobacteria	Cognaticolwellia mytili [NBOF]	253936	253861	-	Asn	GTT	[ENA]	○
	>W1711947666	NBOF01000004	Gammaproteobacteria	Cognaticolwellia mytili [NBOF]	253649	253574	-	Asn	GTT	[ENA]	○
	>W1711947667	NBOF01000004	Gammaproteobacteria	Cognaticolwellia mytili [NBOF]	253525	253450	-	Asn	GTT	[ENA]	○
	>W1711947741	NBOG01000017	Gammaproteobacteria	Cognaticolwellia sediminilitoris [NBOG]	42698	42623	-	Asn	GTT	[ENA]	○
	>W1711947742	NBOG01000017	Gammaproteobacteria	Cognaticolwellia sediminilitoris [NBOG]	42180	42105	-	Asn	GTT	[ENA]	○
	>W1711947743	NBOG01000017	Gammaproteobacteria	Cognaticolwellia sediminilitoris [NBOG]	42048	41973	-	Asn	GTT	[ENA]	○
	>C171034440	CP014943	Gammaproteobacteria	Colwellia sp. PAMC 21821 [CP014943]	312709	312784	+	Asn	GTT	-	○
	>C171034441	CP014943	Gammaproteobacteria	Colwellia sp. PAMC 21821 [CP014943]	312843	312918	+	Asn	GTT	-	○
	>C171034442	CP014943	Gammaproteobacteria	Colwellia sp. PAMC 21821 [CP014943]	312967	313042	+	Asn	GTT	-	○
	>C171034551	CP014944	Gammaproteobacteria	Colwellia sp. PAMC 20917 [CP014944]	4054425	4054350	-	Asn	GTT	-	○
	>C171034552	CP014944	Gammaproteobacteria	Colwellia sp. PAMC 20917 [CP014944]	4054299	4054224	-	Asn	GTT	-	○
	>C171034553	CP014944	Gammaproteobacteria	Colwellia sp. PAMC 20917 [CP014944]	4054100	4054025	-	Asn	GTT	-	○
	>C171066087	CP017689	Gammaproteobacteria	Thalassotalea crassostreae LPB0090 [CP017689]	2081754	2081829	+	Asn	GTT	-	○
	>C171066088	CP017689	Gammaproteobacteria	Thalassotalea crassostreae LPB0090 [CP017689]	2082029	2082104	+	Asn	GTT	-	○
	>C171066089	CP017689	Gammaproteobacteria	Thalassotalea crassostreae LPB0090 [CP017689]	2082143	2082218	+	Asn	GTT	-	○
	>C171066090	CP017689	Gammaproteobacteria	Thalassotalea crassostreae LPB0090 [CP017689]	2082257	2082332	+	Asn	GTT	-	○
	>C171108403	CP020465	Gammaproteobacteria	Cognaticolwellia beringensis NB097-1 [CP020465]	1203239	1203164	-	Asn	GTT	-	○
	>C171108404	CP020465	Gammaproteobacteria	Cognaticolwellia beringensis NB097-1 [CP020465]	1202936	1202861	-	Asn	GTT	-	○
	>C171108405	CP020465	Gammaproteobacteria	Cognaticolwellia beringensis NB097-1 [CP020465]	1202795	1202720	-	Asn	GTT	-	○
	>WENV180396982	OBPW01059734	[OBPW] marine metagenome; seawater		14	89	+	Asn	GTT	[ENA]	◯
	>WENV182540221	OJAF01000308	[OJAF] seawater metagenome; Sea water		4811	4886	+	Asn	GTT	[ENA]	◯
	>WENV182540222	OJAF01000308	[OJAF] seawater metagenome; Sea water		5090	5165	+	Asn	GTT	[ENA]	◯
	>WENV182542039	OJAV01000683	[OJAV] seawater metagenome; Sea water		5549	5624	+	Asn	GTT	[ENA]	◯
	>WENV182542851	OJAZ01004019	[OJAZ] seawater metagenome; Sea water		1919	1844	-	Asn	GTT	[ENA]	◯
	>WENV182543628	OJBC01000007	[OJBC] seawater metagenome; Sea water		142499	142574	+	Asn	GTT	[ENA]	◯
	>WENV182544589	OJBI01000025	[OJBI] seawater metagenome; Sea water		72623	72698	+	Asn	GTT	[ENA]	◯
	>WENV182544787	OJBJ01002655	[OJBJ] seawater metagenome; Sea water		1158	1083	-	Asn	GTT	[ENA]	◯
	>WENV182545094	OJBM01000061	[OJBM] seawater metagenome; Sea water		42816	42741	-	Asn	GTT	[ENA]	◯
	>WENV182549233	OJBY01000022	[OJBY] seawater metagenome; Sea water		116173	116098	-	Asn	GTT	[ENA]	◯
	>WENV182549264	OJBY01000088	[OJBY] seawater metagenome; Sea water		176	101	-	Asn	GTT	[ENA]	◯
	>WENV182549808	OJBZ01000058	[OJBZ] seawater metagenome; Sea water		276	201	-	Asn	GTT	[ENA]	◯
	>WENV182552394	OJCK01000014	[OJCK] seawater metagenome; Sea water		142951	143026	+	Asn	GTT	[ENA]	◯
	>WENV182554589	OJCW01000010	[OJCW] seawater metagenome; Sea water		69155	69230	+	Asn	GTT	[ENA]	◯
	>WENV182555129	OJCY01003309	[OJCY] seawater metagenome; Sea water		1125	1200	+	Asn	GTT	[ENA]	◯
	>WENV182556774	OJDH01000065	[OJDH] seawater metagenome; Sea water		88362	88287	-	Asn	GTT	[ENA]	◯
	>WENV182556775	OJDH01000065	[OJDH] seawater metagenome; Sea water		88238	88163	-	Asn	GTT	[ENA]	◯
	>WENV182557092	OJDI01000892	[OJDI] seawater metagenome; Sea water		10204	10129	-	Asn	GTT	[ENA]	◯
	>WENV182557304	OJDI01005901	[OJDI] seawater metagenome; Sea water		279	204	-	Asn	GTT	[ENA]	◯
	>WENV182557682	OJDK01002174	[OJDK] seawater metagenome; Sea water		3478	3403	-	Asn	GTT	[ENA]	◯
	>WENV182558171	OJDL01009987	[OJDL] seawater metagenome; Sea water		1122	1197	+	Asn	GTT	[ENA]	◯
	>WENV182558172	OJDL01009987	[OJDL] seawater metagenome; Sea water		1353	1428	+	Asn	GTT	[ENA]	◯
	>WENV182558603	OJDN01000005	[OJDN] seawater metagenome; Sea water		142951	143026	+	Asn	GTT	[ENA]	◯
	>WENV182559960	OJDR01000024	[OJDR] seawater metagenome; Sea water		70301	70226	-	Asn	GTT	[ENA]	◯
	>WENV182559963	OJDR01000028	[OJDR] seawater metagenome; Sea water		332	257	-	Asn	GTT	[ENA]	◯
	>WENV182560481	OJDU01002703	[OJDU] seawater metagenome; Sea water		1417	1492	+	Asn	GTT	[ENA]	◯
	>WENV182561207	OJDV01014316	[OJDV] seawater metagenome; Sea water		999	924	-	Asn	GTT	[ENA]	◯
	>WENV182561529	OJDW01002134	[OJDW] seawater metagenome; Sea water		61	136	+	Asn	GTT	[ENA]	◯
	>WENV182565837	OJEI01000142	[OJEI] seawater metagenome; Sea water		10638	10563	-	Asn	GTT	[ENA]	◯
	>WENV182565838	OJEI01000142	[OJEI] seawater metagenome; Sea water		10407	10332	-	Asn	GTT	[ENA]	◯
	>WENV182566081	OJEJ01000025	[OJEJ] seawater metagenome; Sea water		67659	67584	-	Asn	GTT	[ENA]	◯
	>WENV182567452	OJEO01001297	[OJEO] seawater metagenome; Sea water		280	205	-	Asn	GTT	[ENA]	◯
	>WENV182568287	OJET01000049	[OJET] seawater metagenome; Sea water		24297	24372	+	Asn	GTT	[ENA]	◯
	>WENV182568687	OJEW01000270	[OJEW] seawater metagenome; Sea water		4977	5052	+	Asn	GTT	[ENA]	◯
	>WENV182572483	OJFL01012064	[OJFL] seawater metagenome; Sea water		1292	1217	-	Asn	GTT	[ENA]	◯
	>WENV182573418	OJFP01001599	[OJFP] seawater metagenome; Sea water		9817	9892	+	Asn	GTT	[ENA]	◯
	>WENV182575039	OJFS01025415	[OJFS] seawater metagenome; Sea water		210	285	+	Asn	GTT	[ENA]	◯
	>WENV182575184	OJFU01000549	[OJFU] seawater metagenome; Sea water		10843	10768	-	Asn	GTT	[ENA]	◯
	>WENV182575549	OJFV01000056	[OJFV] seawater metagenome; Sea water		86194	86119	-	Asn	GTT	[ENA]	◯
	>WENV182576502	OJFX01041086	[OJFX] seawater metagenome; Sea water		460	385	-	Asn	GTT	[ENA]	◯
	>WENV182577008	OJGC01000376	[OJGC] seawater metagenome; Sea water		322	247	-	Asn	GTT	[ENA]	◯
	>WENV182577734	OJGH01005052	[OJGH] seawater metagenome; Sea water		211	286	+	Asn	GTT	[ENA]	◯
	>WENV182579727	OJGT01000037	[OJGT] seawater metagenome; Sea water		24303	24378	+	Asn	GTT	[ENA]	◯
	>WENV182580143	OJGU01005738	[OJGU] seawater metagenome; Sea water		175	100	-	Asn	GTT	[ENA]	◯
	>WENV182581407	OJGX01005256	[OJGX] seawater metagenome; Sea water		3295	3220	-	Asn	GTT	[ENA]	◯
	>WENV182584565	OJHG01001746	[OJHG] seawater metagenome; Sea water		1338	1263	-	Asn	GTT	[ENA]	◯
	>WENV182587947	OJHO01000249	[OJHO] seawater metagenome; Sea water		8337	8412	+	Asn	GTT	[ENA]	◯
	>WENV182588876	OJHY01000967	[OJHY] seawater metagenome; Sea water		280	205	-	Asn	GTT	[ENA]	◯
	>WENV182591781	OJIO01004743	[OJIO] seawater metagenome; Sea water		1338	1263	-	Asn	GTT	[ENA]	◯
	>WENV182594048	OJIV01000134	[OJIV] seawater metagenome; Sea water		13458	13533	+	Asn	GTT	[ENA]	◯
	>WENV183055487	OLHD01000020	[OLHD] seawater metagenome; Sea water		323	248	-	Asn	GTT	[ENA]	◯
	>WENV183055683	OLHF01000048	[OLHF] seawater metagenome; Sea water		39965	40040	+	Asn	GTT	[ENA]	◯
	>WENV183057560	OLHL01009818	[OLHL] seawater metagenome; Sea water		360	435	+	Asn	GTT	[ENA]	◯
	>WENV183057641	OLHM01000120	[OLHM] seawater metagenome; Sea water		31029	31104	+	Asn	GTT	[ENA]	◯
	>WENV183057642	OLHM01000120	[OLHM] seawater metagenome; Sea water		31260	31335	+	Asn	GTT	[ENA]	◯
	>WENV183057947	OLHN01000046	[OLHN] seawater metagenome; Sea water		276	201	-	Asn	GTT	[ENA]	◯
	>WENV183058087	OLHN01003232	[OLHN] seawater metagenome; Sea water		2113	2038	-	Asn	GTT	[ENA]	◯
	>WENV183059746	OLHV01002017	[OLHV] seawater metagenome; Sea water		183	108	-	Asn	GTT	[ENA]	◯
	>WENV183064810	OLII01000906	[OLII] seawater metagenome; Sea water		2257	2182	-	Asn	GTT	[ENA]	◯
	>WENV183522172	OMOM01000396	[OMOM] seawater metagenome; Sea water		4141	4066	-	Asn	GTT	[ENA]	◯
	>WENV170780475	MAAB01001474	[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days		20716	20791	+	Asn	GTT	[ENA]	◯
	>WENV170780476	MAAB01001474	[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days		20843	20917	+	Asn	GTT	[ENA]	◯
	>WENV170781219	MAAB01029718	[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days		39	114	+	Asn	GTT	[ENA]	◯
	>WENV170781278	MAAB01030795	[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days		2741	2666	-	Asn	GTT	[ENA]	◯
	>WENV170781279	MAAB01030795	[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days		2591	2516	-	Asn	GTT	[ENA]	◯
	>WENV170783194	MAAC01014805	[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days		4642	4717	+	Asn	GTT	[ENA]	◯
	>WENV170783195	MAAC01014805	[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days		4792	4867	+	Asn	GTT	[ENA]	◯
	>WENV170783216	MAAC01014938	[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days		71	146	+	Asn	GTT	[ENA]	◯
	>WENV170783654	MAAC01018334	[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days		8956	9031	+	Asn	GTT	[ENA]	◯
	>WENV170783655	MAAC01018334	[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days		9190	9265	+	Asn	GTT	[ENA]	◯
	>WENV170783656	MAAC01018334	[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days		9304	9379	+	Asn	GTT	[ENA]	◯
	>C181169970	CP028924	Gammaproteobacteria	Colwellia sp. Arc7-D [CP028924]	1428503	1428428	-	Asn	GTT	-	○
	>C181169971	CP028924	Gammaproteobacteria	Colwellia sp. Arc7-D [CP028924]	1428368	1428293	-	Asn	GTT	-	○
	>C181169972	CP028924	Gammaproteobacteria	Colwellia sp. Arc7-D [CP028924]	1428235	1428160	-	Asn	GTT	-	○
	>C191128387	CP034660	Gammaproteobacteria	Colwellia sp. Arc7-635 [CP034660]	1582538	1582463	-	Asn	GTT	-	○
	>C191128388	CP034660	Gammaproteobacteria	Colwellia sp. Arc7-635 [CP034660]	1582405	1582330	-	Asn	GTT	-	○
	>C191128389	CP034660	Gammaproteobacteria	Colwellia sp. Arc7-635 [CP034660]	1582272	1582197	-	Asn	GTT	-	○
	>C191160575	CP038493	Gammaproteobacteria	Thalassotalea sp. HSM 43 [CP038493]	3795829	3795754	-	Asn	GTT	-	○
	>C191160576	CP038493	Gammaproteobacteria	Thalassotalea sp. HSM 43 [CP038493]	3795674	3795599	-	Asn	GTT	-	○
	>C191160577	CP038493	Gammaproteobacteria	Thalassotalea sp. HSM 43 [CP038493]	3795519	3795444	-	Asn	GTT	-	○
	>C191160578	CP038493	Gammaproteobacteria	Thalassotalea sp. HSM 43 [CP038493]	3795364	3795289	-	Asn	GTT	-	○
	>W1511322702	JQDZ01000047	Gammaproteobacteria	Thalassotalea sp. ND16A [JQDZ]	118673	118748	+	Asn	GTT	[ENA]	○
	>W1511322703	JQDZ01000047	Gammaproteobacteria	Thalassotalea sp. ND16A [JQDZ]	119201	119276	+	Asn	GTT	[ENA]	○
	>W1511322704	JQDZ01000047	Gammaproteobacteria	Thalassotalea sp. ND16A [JQDZ]	119415	119490	+	Asn	GTT	[ENA]	○
	>W1610896178	LRUI01000024	Gammaproteobacteria	Thalassotalea crassostreae LPB0090 [LRUI]	293	218	-	Asn	GTT	[ENA]	○
	>W1610896180	LRUI01000040	Gammaproteobacteria	Thalassotalea crassostreae LPB0090 [LRUI]	13	88	+	Asn	GTT	[ENA]	○
	>W1610917303	LSMS01000184	Gammaproteobacteria	Colwellia sp. Phe_37 [LSMS]	2439	2364	-	Asn	GTT	[ENA]	○
	>W1610917304	LSMS01000184	Gammaproteobacteria	Colwellia sp. Phe_37 [LSMS]	2307	2232	-	Asn	GTT	[ENA]	○
	>W1610917305	LSMS01000184	Gammaproteobacteria	Colwellia sp. Phe_37 [LSMS]	2183	2108	-	Asn	GTT	[ENA]	○
	>W1710545269	FOBI01000019	Gammaproteobacteria	Colwellia chukchiensis [FOBI]	486	411	-	Asn	GTT	[ENA]	○
	>W1710545270	FOBI01000019	Gammaproteobacteria	Colwellia chukchiensis [FOBI]	203	128	-	Asn	GTT	[ENA]	○
	>W1710545271	FOBI01000019	Gammaproteobacteria	Colwellia chukchiensis [FOBI]	79	4	-	Asn	GTT	[ENA]	○
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence	Representative sequence of each cluster
View ClustalW result

BACK