Select
|
Sequence ID |
Genome ID (or Accession No.) |
Phylum/Class (Sample source for ENV) |
Species |
Start |
End |
Direction |
AA |
Anticodon |
Genome/Seq. Info. |
Decision |
Identical group No.287552 (66 seq.) |
|
>W1710864233 |
LMFS01000001 |
Alphaproteobacteria |
Pseudolabrys sp. Root1462 (LMFS) |
3399366 |
3399290 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1710882240 |
LMTR01000048 |
Alphaproteobacteria |
Hyphomicrobium sulfonivorans (LMTR) |
2123 |
2199 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W131184866 |
ARTG01000014 |
Alphaproteobacteria |
Hyphomicrobium zavarzinii ATCC 27496 [ARTG] |
169111 |
169187 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>WENV180105355 |
OAPD01038301 |
[OAPD] marine metagenome; 2010 |
|
12 |
88 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180320409 |
OBKO01005106 |
[OBKO] soil metagenome; Alaskan Permafrost |
|
180 |
104 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV180331329 |
OBLA01004047 |
[OBLA] soil metagenome; Alaskan Permafrost |
|
209 |
285 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181162720 |
OEIO01008862 |
[OEIO] marine metagenome; sea ice |
|
866 |
790 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181166801 |
OEIU01002229 |
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex |
|
10380 |
10304 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181185048 |
OELA01000463 |
[OELA] metagenome; 1998 |
|
1018 |
942 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181223530 |
OFDC01028164 |
[OFDC] hot springs metagenome; Water |
|
967 |
891 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181227837 |
OFDN01056622 |
[OFDN] hot springs metagenome; Water |
|
784 |
708 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181297805 |
OFHK01139145 |
[OFHK] soil metagenome; Clay |
|
391 |
315 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181308304 |
OFIS01003158 |
[OFIS] sludge metagenome; sludge |
|
2594 |
2518 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181315062 |
OFJM01000246 |
[OFJM] marine metagenome; sea ice |
|
901 |
825 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV181321788 |
OFKN01008461 |
[OFKN] marine metagenome; seawater |
|
365 |
441 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>W141278375 |
JAFM01000001 |
Alphaproteobacteria |
Hyphomicrobium sp. 802 [JAFM] |
576841 |
576917 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>WENV183627335 |
OOGL01000586 |
[OOGL] marine metagenome; sea ice |
|
855 |
931 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183630835 |
OOGU01004119 |
[OOGU] marine metagenome; sea ice |
|
2051 |
1975 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183667536 |
ORJL010658601 |
[ORJL] groundwater metagenome; groundwater |
|
157 |
81 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183680405 |
ORMF010176650 |
[ORMF] groundwater metagenome; groundwater |
|
839 |
763 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183680658 |
ORMF010208991 |
[ORMF] groundwater metagenome; groundwater |
|
974 |
898 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183681091 |
ORMF010261879 |
[ORMF] groundwater metagenome; groundwater |
|
406 |
330 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV183681900 |
ORMF010373347 |
[ORMF] groundwater metagenome; groundwater |
|
450 |
526 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170000024 |
AERA01001185 |
[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant |
|
338 |
414 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170231877 |
CEQI01003017 |
[CEQI] marine metagenome genome assembly TARA_076_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
171 |
95 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170234164 |
CEQK01014443 |
[CEQK] marine metagenome genome assembly TARA_076_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
210 |
286 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170267159 |
CERF01014106 |
[CERF] marine metagenome genome assembly TARA_072_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
217 |
293 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170313399 |
CESN01016273 |
[CESN] marine metagenome genome assembly TARA_098_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
398 |
322 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170420531 |
CEUN01007457 |
[CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
228 |
152 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170550835 |
CXWF01035804 |
[CXWF] marine metagenome genome assembly TARA_064_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) |
|
737 |
661 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170649659 |
JRYC01052982 |
[JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater |
|
79 |
3 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170652234 |
JRYH01000207 |
[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and |
|
174 |
250 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170653982 |
JRYK01001693 |
[JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated |
|
523 |
599 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170655245 |
JTFN01014296 |
[JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating |
|
143 |
219 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170661788 |
JXWV01117554 |
[JXWV] soil metagenome; rice field; organic FYM Plot |
|
277 |
353 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170668046 |
LADL02000502 |
[LADL] rock porewater metagenome; Opalinus Clay rock porewater BRC-3 borehole |
|
18387 |
18311 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170713871 |
LNFM01045204 |
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant |
|
811 |
887 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170714683 |
LNFM01093712 |
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant |
|
293 |
369 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170714792 |
LNFM01102539 |
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant |
|
776 |
700 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170715110 |
LNFM01134345 |
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant |
|
1156 |
1080 |
- |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170715143 |
LNFM01138664 |
[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant |
|
232 |
308 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170953092 |
MEHZ011628533 |
[MEHZ] marine metagenome; marine surface water |
|
583 |
659 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170962438 |
MRWF01016058 |
[MRWF] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell |
|
71032 |
71108 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>WENV170964443 |
MRWG01012181 |
[MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell |
|
306 |
382 |
+ |
Ile |
GAT |
[ENA] |
¢þ |
|
>C191171937 |
CP039740 |
Alphaproteobacteria |
Pseudolabrys sp. FHR47 (CP039740) |
994199 |
994275 |
+ |
Ile |
GAT |
- |
¡û |
|
>W09135219 |
ACVL01000012 |
Alphaproteobacteria |
Hyphomicrobium denitrificans ATCC 51888 [ACVL] |
141969 |
141893 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1910232040 |
FPEJ01000001 |
Alphaproteobacteria |
Hyphomicrobium sp. NDB2Meth4 (FPEJ) |
358786 |
358710 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>C141010484 |
CP006912 |
Alphaproteobacteria |
Hyphomicrobium nitrativorans NL23 |
700119 |
700195 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>W1810789365 |
QRGO01000001 |
Alphaproteobacteria |
Pseudolabrys sp. GY_H (QRGO) |
479795 |
479719 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>C151104275 |
LN829118 |
Alphaproteobacteria |
Filomicrobium sp. W strain W |
1186006 |
1186082 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>C151104321 |
LN829119 |
Alphaproteobacteria |
Filomicrobium sp. Y strain Y |
1186001 |
1186077 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>ENV09002985 |
ADGO01000581 |
Compost metagenome contig00001 |
|
361 |
437 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W1510072625 |
CDHO01000001 |
Alphaproteobacteria |
Hyphomicrobium sp. GJ21 [CDHO] |
502336 |
502412 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>WENV000290 |
AACY020009132 |
Marine microbial communities from Global Ocean Sampling (GOS) |
|
53 |
129 |
+ |
Ile |
GAT |
[ENA] |
|
|
>C10107540 |
CP002083 |
Alphaproteobacteria |
Hyphomicrobium denitrificans ATCC 51888 |
3626270 |
3626346 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>WENV11100382 |
AERA01001185 |
[AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant |
|
338 |
414 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>C11111384 |
FQ859181 |
Alphaproteobacteria |
Hyphomicrobium sp. MC1 |
4742340 |
4742416 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>W11181099 |
AGIS01000002 |
Alphaproteobacteria |
Hyphomicrobium denitrificans 1NES1 [AGIS] |
498524 |
498448 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>WENV060481 |
AACY023400402 |
Marine microbial communities from Global Ocean Sampling (GOS) |
|
1174 |
1098 |
- |
Ile |
GAT |
[ENA] |
|
|
>C131015814 |
CP005587 |
Alphaproteobacteria |
Hyphomicrobium denitrificans 1NES1 |
3793708 |
3793784 |
+ |
Ile |
GAT |
[Ensembl] |
¡û |
|
>W1610726579 |
LMFS01000001 |
Alphaproteobacteria |
Pseudolabrys sp. Root1462 (LMFS) |
3399366 |
3399290 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1610744166 |
LMTR01000048 |
Alphaproteobacteria |
Hyphomicrobium sulfonivorans (LMTR) |
2123 |
2199 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>ENV001325 |
AY713447 |
Environmental sample from ENV division of INSDC |
|
246 |
324 |
+ |
Ile |
GAT |
[ENA] |
|
|
>W1710524908 |
FNJC01000001 |
Alphaproteobacteria |
Filomicrobium insigne (FNJC) |
1002542 |
1002466 |
- |
Ile |
GAT |
[ENA] |
¡û |
|
>W1710579328 |
FPCH01000001 |
Alphaproteobacteria |
Hyphomicrobium facile (FPCH) |
2072 |
2148 |
+ |
Ile |
GAT |
[ENA] |
¡û |
|
>W1710579373 |
FPCH01000005 |
Alphaproteobacteria |
Hyphomicrobium facile (FPCH) |
2072 |
2148 |
+ |
Ile |
GAT |
[ENA] |
¡û |
Select
|
Sequence ID |
Genome ID (or Accession No.) |
Phylum/Class (Sample source for ENV) |
Species |
Start |
End |
Direction |
AA |
Anticodon |
Genome/Seq. Info. |
Decision |