tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.287552 (66 seq.)
>W1710864233 LMFS01000001 Alphaproteobacteria Pseudolabrys sp. Root1462 (LMFS) 3399366 3399290 - Ile GAT [ENA] ¡û
>W1710882240 LMTR01000048 Alphaproteobacteria Hyphomicrobium sulfonivorans (LMTR) 2123 2199 + Ile GAT [ENA] ¡û
>W131184866 ARTG01000014 Alphaproteobacteria Hyphomicrobium zavarzinii ATCC 27496 [ARTG] 169111 169187 + Ile GAT [ENA] ¡û
>WENV180105355 OAPD01038301 [OAPD] marine metagenome; 2010 12 88 + Ile GAT [ENA] ¢þ
>WENV180320409 OBKO01005106 [OBKO] soil metagenome; Alaskan Permafrost 180 104 - Ile GAT [ENA] ¢þ
>WENV180331329 OBLA01004047 [OBLA] soil metagenome; Alaskan Permafrost 209 285 + Ile GAT [ENA] ¢þ
>WENV181162720 OEIO01008862 [OEIO] marine metagenome; sea ice 866 790 - Ile GAT [ENA] ¢þ
>WENV181166801 OEIU01002229 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 10380 10304 - Ile GAT [ENA] ¢þ
>WENV181185048 OELA01000463 [OELA] metagenome; 1998 1018 942 - Ile GAT [ENA] ¢þ
>WENV181223530 OFDC01028164 [OFDC] hot springs metagenome; Water 967 891 - Ile GAT [ENA] ¢þ
>WENV181227837 OFDN01056622 [OFDN] hot springs metagenome; Water 784 708 - Ile GAT [ENA] ¢þ
>WENV181297805 OFHK01139145 [OFHK] soil metagenome; Clay 391 315 - Ile GAT [ENA] ¢þ
>WENV181308304 OFIS01003158 [OFIS] sludge metagenome; sludge 2594 2518 - Ile GAT [ENA] ¢þ
>WENV181315062 OFJM01000246 [OFJM] marine metagenome; sea ice 901 825 - Ile GAT [ENA] ¢þ
>WENV181321788 OFKN01008461 [OFKN] marine metagenome; seawater 365 441 + Ile GAT [ENA] ¢þ
>W141278375 JAFM01000001 Alphaproteobacteria Hyphomicrobium sp. 802 [JAFM] 576841 576917 + Ile GAT [ENA] ¡û
>WENV183627335 OOGL01000586 [OOGL] marine metagenome; sea ice 855 931 + Ile GAT [ENA] ¢þ
>WENV183630835 OOGU01004119 [OOGU] marine metagenome; sea ice 2051 1975 - Ile GAT [ENA] ¢þ
>WENV183667536 ORJL010658601 [ORJL] groundwater metagenome; groundwater 157 81 - Ile GAT [ENA] ¢þ
>WENV183680405 ORMF010176650 [ORMF] groundwater metagenome; groundwater 839 763 - Ile GAT [ENA] ¢þ
>WENV183680658 ORMF010208991 [ORMF] groundwater metagenome; groundwater 974 898 - Ile GAT [ENA] ¢þ
>WENV183681091 ORMF010261879 [ORMF] groundwater metagenome; groundwater 406 330 - Ile GAT [ENA] ¢þ
>WENV183681900 ORMF010373347 [ORMF] groundwater metagenome; groundwater 450 526 + Ile GAT [ENA] ¢þ
>WENV170000024 AERA01001185 [AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant 338 414 + Ile GAT [ENA] ¢þ
>WENV170231877 CEQI01003017 [CEQI] marine metagenome genome assembly TARA_076_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 171 95 - Ile GAT [ENA] ¢þ
>WENV170234164 CEQK01014443 [CEQK] marine metagenome genome assembly TARA_076_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 210 286 + Ile GAT [ENA] ¢þ
>WENV170267159 CERF01014106 [CERF] marine metagenome genome assembly TARA_072_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 217 293 + Ile GAT [ENA] ¢þ
>WENV170313399 CESN01016273 [CESN] marine metagenome genome assembly TARA_098_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 398 322 - Ile GAT [ENA] ¢þ
>WENV170420531 CEUN01007457 [CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 228 152 - Ile GAT [ENA] ¢þ
>WENV170550835 CXWF01035804 [CXWF] marine metagenome genome assembly TARA_064_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 737 661 - Ile GAT [ENA] ¢þ
>WENV170649659 JRYC01052982 [JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater 79 3 - Ile GAT [ENA] ¢þ
>WENV170652234 JRYH01000207 [JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and 174 250 + Ile GAT [ENA] ¢þ
>WENV170653982 JRYK01001693 [JRYK] activated sludge metagenome; activated biomass of a wastewaster treatment plant treating hydrocarbon contaminated 523 599 + Ile GAT [ENA] ¢þ
>WENV170655245 JTFN01014296 [JTFN] activated sludge metagenome; CETP activated sludge from CETP activated sludge from augmented bioreactor treating 143 219 + Ile GAT [ENA] ¢þ
>WENV170661788 JXWV01117554 [JXWV] soil metagenome; rice field; organic FYM Plot 277 353 + Ile GAT [ENA] ¢þ
>WENV170668046 LADL02000502 [LADL] rock porewater metagenome; Opalinus Clay rock porewater BRC-3 borehole 18387 18311 - Ile GAT [ENA] ¢þ
>WENV170713871 LNFM01045204 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 811 887 + Ile GAT [ENA] ¢þ
>WENV170714683 LNFM01093712 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 293 369 + Ile GAT [ENA] ¢þ
>WENV170714792 LNFM01102539 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 776 700 - Ile GAT [ENA] ¢þ
>WENV170715110 LNFM01134345 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 1156 1080 - Ile GAT [ENA] ¢þ
>WENV170715143 LNFM01138664 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 232 308 + Ile GAT [ENA] ¢þ
>WENV170953092 MEHZ011628533 [MEHZ] marine metagenome; marine surface water 583 659 + Ile GAT [ENA] ¢þ
>WENV170962438 MRWF01016058 [MRWF] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 71032 71108 + Ile GAT [ENA] ¢þ
>WENV170964443 MRWG01012181 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 306 382 + Ile GAT [ENA] ¢þ
>C191171937 CP039740 Alphaproteobacteria Pseudolabrys sp. FHR47 (CP039740) 994199 994275 + Ile GAT - ¡û
>W09135219 ACVL01000012 Alphaproteobacteria Hyphomicrobium denitrificans ATCC 51888 [ACVL] 141969 141893 - Ile GAT [ENA] ¡û
>W1910232040 FPEJ01000001 Alphaproteobacteria Hyphomicrobium sp. NDB2Meth4 (FPEJ) 358786 358710 - Ile GAT [ENA] ¡û
>C141010484 CP006912 Alphaproteobacteria Hyphomicrobium nitrativorans NL23 700119 700195 + Ile GAT [Ensembl] ¡û
>W1810789365 QRGO01000001 Alphaproteobacteria Pseudolabrys sp. GY_H (QRGO) 479795 479719 - Ile GAT [ENA] ¡û
>C151104275 LN829118 Alphaproteobacteria Filomicrobium sp. W strain W 1186006 1186082 + Ile GAT [Ensembl] ¡û
>C151104321 LN829119 Alphaproteobacteria Filomicrobium sp. Y strain Y 1186001 1186077 + Ile GAT [Ensembl] ¡û
>ENV09002985 ADGO01000581 Compost metagenome contig00001 361 437 + Ile GAT [ENA] ¡û
>W1510072625 CDHO01000001 Alphaproteobacteria Hyphomicrobium sp. GJ21 [CDHO] 502336 502412 + Ile GAT [ENA] ¡û
>WENV000290 AACY020009132 Marine microbial communities from Global Ocean Sampling (GOS) 53 129 + Ile GAT [ENA]
>C10107540 CP002083 Alphaproteobacteria Hyphomicrobium denitrificans ATCC 51888 3626270 3626346 + Ile GAT [Ensembl] ¡û
>WENV11100382 AERA01001185 [AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant 338 414 + Ile GAT [ENA] ¡û
>C11111384 FQ859181 Alphaproteobacteria Hyphomicrobium sp. MC1 4742340 4742416 + Ile GAT [Ensembl] ¡û
>W11181099 AGIS01000002 Alphaproteobacteria Hyphomicrobium denitrificans 1NES1 [AGIS] 498524 498448 - Ile GAT [ENA] ¡û
>WENV060481 AACY023400402 Marine microbial communities from Global Ocean Sampling (GOS) 1174 1098 - Ile GAT [ENA]
>C131015814 CP005587 Alphaproteobacteria Hyphomicrobium denitrificans 1NES1 3793708 3793784 + Ile GAT [Ensembl] ¡û
>W1610726579 LMFS01000001 Alphaproteobacteria Pseudolabrys sp. Root1462 (LMFS) 3399366 3399290 - Ile GAT [ENA] ¡û
>W1610744166 LMTR01000048 Alphaproteobacteria Hyphomicrobium sulfonivorans (LMTR) 2123 2199 + Ile GAT [ENA] ¡û
>ENV001325 AY713447 Environmental sample from ENV division of INSDC 246 324 + Ile GAT [ENA]
>W1710524908 FNJC01000001 Alphaproteobacteria Filomicrobium insigne (FNJC) 1002542 1002466 - Ile GAT [ENA] ¡û
>W1710579328 FPCH01000001 Alphaproteobacteria Hyphomicrobium facile (FPCH) 2072 2148 + Ile GAT [ENA] ¡û
>W1710579373 FPCH01000005 Alphaproteobacteria Hyphomicrobium facile (FPCH) 2072 2148 + Ile GAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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