tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.290703 (68 seq.)
>W1711149187 LVLG01000007 Betaproteobacteria Polynucleobacter asymbioticus [LVLG] 827974 827899 - Phe GAA [ENA] ¡û
>W1711394642 MEQM01000139 Betaproteobacteria Betaproteobacteria bacterium RBG_16_56_24 [MEQM] 5573 5498 - Phe GAA [ENA] ¡û
>W1711394896 MESN01000500 Betaproteobacteria Burkholderiales bacterium RIFOXYC12_FULL_60_6 [MESN] 1263 1188 - Phe GAA [ENA] ¡û
>W1711413631 MGWP01000058 Betaproteobacteria Gallionellales bacterium GWA2_55_18 [MGWP] 3833 3908 + Phe GAA [ENA] ¡û
>W1711413771 MGWU01000183 Betaproteobacteria Gallionellales bacterium RBG_16_56_9 [MGWU] 3525 3450 - Phe GAA [ENA] ¡û
>W1711413799 MGWV01000212 Betaproteobacteria Gallionellales bacterium RBG_16_57_15 [MGWV] 1115 1190 + Phe GAA [ENA] ¡û
>W1711413818 MGXD01000264 Betaproteobacteria Gallionellales bacterium RIFOXYB12_FULL_54_9 [MGXD] 308 233 - Phe GAA [ENA] ¡û
>C171094249 CP019430 Betaproteobacteria Oxalobacter formigenes OXCC13 [CP019430] 1082968 1082893 - Phe GAA - ¡û
>WENV180038483 FZPX01000035 [FZPX] metagenome; underground water 9836 9911 + Phe GAA [ENA] ¢þ
>WENV181205631 OESW01000339 [OESW] metagenome; underground water 1163 1238 + Phe GAA [ENA] ¢þ
>WENV181364593 OFOZ01000075 [OFOZ] sediment metagenome; Lake sediment 368 443 + Phe GAA [ENA] ¢þ
>WENV181365012 OFPH01000356 [OFPH] sediment metagenome; Lake sediment 978 903 - Phe GAA [ENA] ¢þ
>WENV181365187 OFPL01000033 [OFPL] sediment metagenome; Lake sediment 20658 20583 - Phe GAA [ENA] ¢þ
>WENV181367663 OFQC01000540 [OFQC] freshwater metagenome; Freshwater Lake 1861 1936 + Phe GAA [ENA] ¢þ
>WENV181380391 OFRD01074296 [OFRD] wastewater metagenome; Exp Tend CN 100WW 263 188 - Phe GAA [ENA] ¢þ
>WENV181402473 OFTY01002070 [OFTY] sludge metagenome; sludge 2227 2152 - Phe GAA [ENA] ¢þ
>WENV181838523 OGVN01002136 [OGVN] freshwater metagenome; freshwater 694 769 + Phe GAA [ENA] ¢þ
>WENV181838743 OGVN01015037 [OGVN] freshwater metagenome; freshwater 888 813 - Phe GAA [ENA] ¢þ
>WENV181838810 OGVN01022141 [OGVN] freshwater metagenome; freshwater 609 684 + Phe GAA [ENA] ¢þ
>WENV181839770 OGVO01011393 [OGVO] freshwater metagenome; freshwater 890 965 + Phe GAA [ENA] ¢þ
>WENV181844073 OGVV01007442 [OGVV] freshwater metagenome; freshwater 844 919 + Phe GAA [ENA] ¢þ
>WENV181855939 OGWM01007120 [OGWM] freshwater metagenome; freshwater 429 504 + Phe GAA [ENA] ¢þ
>WENV181882989 OGXI01001056 [OGXI] human gut metagenome; faeces 5667 5742 + Phe GAA [ENA] ¢þ
>WENV181913990 OGYE01064077 [OGYE] human gut metagenome; faeces 234 309 + Phe GAA [ENA] ¢þ
>WENV181929185 OGYO01013051 [OGYO] human gut metagenome; faeces 373 298 - Phe GAA [ENA] ¢þ
>WENV181972708 OHAA01002113 [OHAA] human gut metagenome; faeces 10337 10262 - Phe GAA [ENA] ¢þ
>WENV183086633 OLJF01063215 [OLJF] metagenome; faeces 263 338 + Phe GAA [ENA] ¢þ
>WENV183331250 OLWB01077706 [OLWB] human gut metagenome; faeces 108 33 - Phe GAA [ENA] ¢þ
>WENV183575681 OOCI01005165 [OOCI] human gut metagenome; human gut 110 35 - Phe GAA [ENA] ¢þ
>WENV183681693 ORMF010345473 [ORMF] groundwater metagenome; groundwater 4040 3965 - Phe GAA [ENA] ¢þ
>WENV170140933 CENX01135254 [CENX] marine metagenome genome assembly TARA_018_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 175 250 + Phe GAA [ENA] ¢þ
>WENV170152989 CEOF01046510 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 176 101 - Phe GAA [ENA] ¢þ
>WENV170322012 CESR01100474 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 164 237 + Phe GAA [ENA] ¢þ
>WENV170492073 CEVQ01117302 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 399 326 - Phe GAA [ENA] ¢þ
>WENV170531131 CEWK01098750 [CEWK] marine metagenome genome assembly TARA_132_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6015 5940 - Phe GAA [ENA] ¢þ
>WENV170558736 CXWL01087345 [CXWL] groundwater metagenome; biofilm material 730 805 + Phe GAA [ENA] ¢þ
>WENV170559292 CXWL01117960 [CXWL] groundwater metagenome; biofilm material 3288 3363 + Phe GAA [ENA] ¢þ
>WENV170559301 CXWL01118388 [CXWL] groundwater metagenome; biofilm material 1095 1020 - Phe GAA [ENA] ¢þ
>WENV170559575 CXWL01130480 [CXWL] groundwater metagenome; biofilm material 483 558 + Phe GAA [ENA] ¢þ
>WENV170708870 LNFM01000011 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 12828 12903 + Phe GAA [ENA] ¢þ
>WENV170868658 MDTB01165026 [MDTB] marine metagenome; seawater 5782 5707 - Phe GAA [ENA] ¢þ
>WENV170887981 MDTC01249123 [MDTC] marine metagenome; seawater 6962 7037 + Phe GAA [ENA] ¢þ
>C181163943 CP028324 Betaproteobacteria Pseudoduganella armeniaca ZMN-3 [CP028324] 5796103 5796178 + Phe GAA - ¡û
>C181187756 CP030092 Betaproteobacteria Massilia sp. YMA4 [CP030092] 5571211 5571136 - Phe GAA - ¡û
>C181187757 CP030092 Betaproteobacteria Massilia sp. YMA4 [CP030092] 5522196 5522121 - Phe GAA - ¡û
>W09107492 ABJA01000001 Betaproteobacteria Polynucleobacter necessarius STIR1 [ABJA] 50998 51073 + Phe GAA [ENA] ¡û
>W09119197 ACDP01000008 Betaproteobacteria Oxalobacter paraformigenes HOxBLS [ACDP] 7802 7727 - Phe GAA [ENA] ¡û
>W09119243 ACDQ01000010 Betaproteobacteria Oxalobacter formigenes OXCC13 [ACDQ] 27761 27836 + Phe GAA [ENA] ¡û
>W1910728380 MGWX01000087 Betaproteobacteria Gallionellales bacterium RIFCSPLOWO2_02_58_13 [MGWX] 5785 5860 + Phe GAA [ENA] ¡û
>W1910728412 MGWY01000448 Betaproteobacteria Gallionellales bacterium RIFCSPLOWO2_02_60_31 [MGWY] 2702 2627 - Phe GAA [ENA] ¡û
>W1911802742 QYUN01000002 Betaproteobacteria Noviherbaspirillum cavernae K2R10-39 [QYUN] 3316617 3316692 + Phe GAA [ENA] ¡û
>W1810068369 PDZK01000008 Betaproteobacteria Janthinobacterium sp. BJB446 [PDZK] 2224 2299 + Phe GAA [ENA] ¡û
>W1810068370 PDZK01000008 Betaproteobacteria Janthinobacterium sp. BJB446 [PDZK] 14041 14116 + Phe GAA [ENA] ¡û
>W1810121301 PHUG01000001 Betaproteobacteria Janthinobacterium sp. 64 [PHUG] 4433730 4433655 - Phe GAA [ENA] ¡û
>W1810121302 PHUG01000001 Betaproteobacteria Janthinobacterium sp. 64 [PHUG] 4417448 4417373 - Phe GAA [ENA] ¡û
>W1810297197 PTLZ01000001 Betaproteobacteria Herminiimonas fonticola S-94 [PTLZ] 12670 12745 + Phe GAA [ENA] ¡û
>W1810756477 QPGB01000001 Betaproteobacteria Parvibium lacunae KMB9 [QPGB] 25511 25586 + Phe GAA [ENA] ¡û
>W1810887518 QUQN01000002 Betaproteobacteria Herbaspirillum sp. 3R-3a1 [QUQN] 428812 428887 + Phe GAA [ENA] ¡û
>C11105072 CP002745 Betaproteobacteria Collimonas fungivorans Ter331 [CP002745] 4586535 4586610 + Phe GAA [Ensembl] ¡û
>W11143213 AEPR01000248 Betaproteobacteria Oxalobacteraceae bacterium IMCC9480 [AEPR] 3044 2969 - Phe GAA [ENA] ¡û
>C161040276 CP012157 Betaproteobacteria Betaproteobacteria bacterium UKL13-2 [CP012157] 515359 515284 - Phe GAA - ¡û
>C161053744 CP013235 Betaproteobacteria Collimonas arenae Ter282 [CP013235] 4054914 4054989 + Phe GAA [Ensembl] ¡û
>C161092383 CP015922 Betaproteobacteria Polynucleobacter wuianus QLW-P1FAT50C-4 [CP015922] 2212808 2212733 - Phe GAA [Ensembl] ¡û
>C131007306 CP003805 Betaproteobacteria Candidatus Kinetoplastibacterium oncopeltii TCC290E [CP003805] 71804 71729 - Phe GAA [Ensembl] ¡û
>C131007348 CP003806 Betaproteobacteria Candidatus Kinetoplastibacterium galatii TCC219 [CP003806] 72160 72085 - Phe GAA [Ensembl] ¡û
>W1710530361 FNOR01000008 Betaproteobacteria Collimonas sp. OK242 [FNOR] 140080 140155 + Phe GAA [ENA] ¡û
>W1710720666 LFKP01000014 Betaproteobacteria Janthinobacterium lividum [LFKP] 21821 21896 + Phe GAA [ENA] ¡û
>W1710720667 LFKP01000014 Betaproteobacteria Janthinobacterium lividum [LFKP] 31930 32005 + Phe GAA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK