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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.29652 (242 seq.)
>W1710802949
LJYE01000111
Alphaproteobacteria
Bradyrhizobium pachyrhizi [LJYE]
35709
35620
-
Ser
CGA
[ENA]
¡û
>W1710802960
LJYF01000007
Alphaproteobacteria
Bradyrhizobium yuanmingense [LJYF]
7426
7337
-
Ser
CGA
[ENA]
¡û
>W1710803003
LJYG01000004
Alphaproteobacteria
Bradyrhizobium manausense [LJYG]
159131
159220
+
Ser
CGA
[ENA]
¡û
>W1710854951
LLXX01000203
Alphaproteobacteria
Bradyrhizobium valentinum [LLXX]
14191
14102
-
Ser
CGA
[ENA]
¡û
>W1710854995
LLXY01000183
Alphaproteobacteria
Bradyrhizobium valentinum [LLXY]
9695
9606
-
Ser
CGA
[ENA]
¡û
>W1710855011
LLXZ01000001
Alphaproteobacteria
Bradyrhizobium jicamae [LLXZ]
35649
35738
+
Ser
CGA
[ENA]
¡û
>W1710855089
LLYA01000057
Alphaproteobacteria
Bradyrhizobium retamae [LLYA]
98985
99074
+
Ser
CGA
[ENA]
¡û
>W1710855137
LLYB01000047
Alphaproteobacteria
Bradyrhizobium lablabi [LLYB]
125599
125510
-
Ser
CGA
[ENA]
¡û
>W1710877760
LMQJ01000056
Alphaproteobacteria
Bradyrhizobium sp. Leaf396 [LMQJ]
3334
3245
-
Ser
CGA
[ENA]
¡û
>W1710891437
LNCU01000126
Alphaproteobacteria
Bradyrhizobium macuxiense BR 10303 [LNCU]
7697
7608
-
Ser
CGA
[ENA]
¡û
>W1711009527
LQQT01000016
Alphaproteobacteria
Chelatococcus daeguensis [LQQT]
151288
151377
+
Ser
CGA
[ENA]
¡û
>W1711067395
LSEF01000046
Alphaproteobacteria
Bradyrhizobium neotropicale [LSEF]
113212
113301
+
Ser
CGA
[ENA]
¡û
>W1711073011
LSIC01000199
Alphaproteobacteria
Bradyrhizobium sp. CCH5-F6 [LSIC]
30113
30202
+
Ser
CGA
[ENA]
¡û
>W1711124798
LUKO01000160
Alphaproteobacteria
Bradyrhizobium liaoningense [LUKO]
651635
651724
+
Ser
CGA
[ENA]
¡û
>W1711129629
LUUB01000107
Alphaproteobacteria
Bradyrhizobium centrolobii BR 10245 [LUUB]
105053
105142
+
Ser
CGA
[ENA]
¡û
>W1711138887
LVEM01000002
Alphaproteobacteria
Bradyrhizobium stylosanthis [LVEM]
33107
33018
-
Ser
CGA
[ENA]
¡û
>W1711180123
LWIG01000017
Alphaproteobacteria
Bradyrhizobium sacchari BR10280 [LWIG]
27675
27586
-
Ser
CGA
[ENA]
¡û
>W1711193143
LWUI01000014
Alphaproteobacteria
Bradyrhizobium elkanii [LWUI]
181200
181289
+
Ser
CGA
[ENA]
¡û
>W1711206726
LXEM01000007
Alphaproteobacteria
Bradyrhizobium elkanii [LXEM]
33189
33100
-
Ser
CGA
[ENA]
¡û
>W1711317161
MAXB01000040
Alphaproteobacteria
Bradyrhizobium paxllaeri [MAXB]
29210
29121
-
Ser
CGA
[ENA]
¡û
>W1711317209
MAXC01000011
Alphaproteobacteria
Bradyrhizobium sp. LMTR 3 [MAXC]
18489
18400
-
Ser
CGA
[ENA]
¡û
>W1711487068
MKFI01000006
Alphaproteobacteria
Bradyrhizobium mercantei SEMIA 6399 [MKFI]
558916
558827
-
Ser
CGA
[ENA]
¡û
>W1711504236
MKUJ01000002
Alphaproteobacteria
Afipia sp. 64-13 [MKUJ]
20978
21067
+
Ser
CGA
[ENA]
¡û
>W1711505866
MKVX01000005
Alphaproteobacteria
Rhizobiales bacterium 62-47 [MKVX]
148218
148129
-
Ser
CGA
[ENA]
¡û
>W1711613021
MOXO01000180
Alphaproteobacteria
Bradyrhizobium elkanii [MOXO]
7412
7501
+
Ser
CGA
[ENA]
¡û
>W1711636760
MPVQ01000088
Alphaproteobacteria
Bradyrhizobium brasilense UFLA 03-321 [MPVQ]
35956
35867
-
Ser
CGA
[ENA]
¡û
>W1711783496
MVOD01000008
Alphaproteobacteria
Rhodopseudomonas palustris [MVOD]
50272
50361
+
Ser
CGA
[ENA]
¡û
>W1711928936
NAFL01000230
Alphaproteobacteria
Bradyrhizobium japonicum [NAFL]
27326
27237
-
Ser
CGA
[ENA]
¡û
>W1712049596
NFUH01000102
Alphaproteobacteria
Bradyrhizobium guangdongense [NFUH]
5488
5577
+
Ser
CGA
[ENA]
¡û
>C171021133
CP013127
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 122 [CP013127]
457003
456914
-
Ser
CGA
-
¡û
>C171064704
CP017637
Alphaproteobacteria
Bradyrhizobium japonicum J5 [CP017637]
408359
408270
-
Ser
CGA
-
¡û
>C171072657
CP018095
Alphaproteobacteria
Chelatococcus daeguensis TAD1 [CP018095]
872731
872820
+
Ser
CGA
-
¡û
>C171131951
LT859959
Alphaproteobacteria
Bradyrhizobium sp. ORS 285 [LT859959]
7224601
7224512
-
Ser
CGA
-
¡û
>W131164086
ARAG01000005
Alphaproteobacteria
Bradyrhizobium elkanii USDA 76 [ARAG]
183581
183670
+
Ser
CGA
[ENA]
¡û
>W131164974
ARBF01000063
Alphaproteobacteria
Bradyrhizobium sp. WSM2793 WSM2793 [ARBF]
371
282
-
Ser
CGA
[ENA]
¡û
>W131170247
ARFJ01000019
Alphaproteobacteria
Bradyrhizobium japonicum USDA 124 [ARFJ]
46553
46464
-
Ser
CGA
[ENA]
¡û
>W131217303
ATWP01000003
Alphaproteobacteria
Bradyrhizobium japonicum is5 [ATWP]
496676
496765
+
Ser
CGA
[ENA]
¡û
>W131227242
AUEZ01000062
Alphaproteobacteria
Bradyrhizobium sp. Ai1a-2 [AUEZ]
51855
51944
+
Ser
CGA
[ENA]
¡û
>W131227289
AUFA01000025
Alphaproteobacteria
Bradyrhizobium sp. Cp5.3 [AUFA]
85019
85108
+
Ser
CGA
[ENA]
¡û
>W131228550
AUGA01000018
Alphaproteobacteria
Bradyrhizobium sp. th.b2 [AUGA]
173629
173718
+
Ser
CGA
[ENA]
¡û
>W131228681
AUGD01000003
Alphaproteobacteria
Bradyrhizobium japonicum in8p8 [AUGD]
18499
18410
-
Ser
CGA
[ENA]
¡û
>C003091
BA000040
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 110 USDA110 [BA000040]
451390
451301
-
Ser
CGA
[Ensembl]
¡û
>C004033
CP000494
Alphaproteobacteria
Bradyrhizobium sp. BTAi1 [CP000494]
432947
433036
+
Ser
CGA
[Ensembl]
¡û
>C004080
CU234118
Alphaproteobacteria
Bradyrhizobium sp. ORS 278 ORS278 [CU234118]
449051
449140
+
Ser
CGA
[Ensembl]
¡û
>C019021
BX571963
Alphaproteobacteria
Rhodopseudomonas palustris [BX571963]
175810
175721
-
Ser
CGA
[Ensembl]
¡û
>W141001323
ADOU01000120
Alphaproteobacteria
Bradyrhizobium diazoefficiens SEMIA 5080 [ADOU]
84124
84213
+
Ser
CGA
[ENA]
¡û
>WENV180032461
FTJZ01328556
[FTJZ] metagenome; soil
77
166
+
Ser
CGA
[ENA]
¢þ
>W141007504
AGWY01000012
Alphaproteobacteria
Afipia clevelandensis ATCC 49720 [AGWY]
222585
222496
-
Ser
CGA
[ENA]
¡û
>WENV180105089
OAPD01004855
[OAPD] marine metagenome; 2010
95
184
+
Ser
CGA
[ENA]
¢þ
>WENV180344169
OBLK01257709
[OBLK] soil metagenome; Clay
92
181
+
Ser
CGA
[ENA]
¢þ
>W141041828
AMCQ01000010
Alphaproteobacteria
Bradyrhizobium sp. CCGE-LA001 [AMCQ]
661
572
-
Ser
CGA
[ENA]
¡û
>W141043075
AMFB01000053
Alphaproteobacteria
Bradyrhizobium sp. DFCI-1 [AMFB]
6937
7026
+
Ser
CGA
[ENA]
¡û
>w001316
AAAF01000015
Alphaproteobacteria
Rhodopseudomonas palustris [AAAF]
191587
191676
+
Ser
CGA
[ENA]
¡û
>W141063661
APJD01000019
Alphaproteobacteria
Bradyrhizobium sp. OHSU_III [APJD]
254702
254791
+
Ser
CGA
[ENA]
¡û
>WENV181145119
OEHO01201702
[OEHO] metagenome; unknown
186
97
-
Ser
CGA
[ENA]
¢þ
>WENV181165935
OEIS01301079
[OEIS] soil metagenome; soil
105
194
+
Ser
CGA
[ENA]
¢þ
>WENV181166347
OEIU01000117
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
52259
52170
-
Ser
CGA
[ENA]
¢þ
>WENV181168854
OEIU01850634
[OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
8
97
+
Ser
CGA
[ENA]
¢þ
>WENV181172031
OEIV010454731
[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
182
271
+
Ser
CGA
[ENA]
¢þ
>WENV181308369
OFIS01008123
[OFIS] sludge metagenome; sludge
503
414
-
Ser
CGA
[ENA]
¢þ
>WENV181371564
OFQV01018718
[OFQV] wastewater metagenome; WWTP Cannobio (Effluent)
344
257
-
Ser
CGA
[ENA]
¢þ
>WENV181375025
OFQY01040834
[OFQY] wastewater metagenome; Exp Tend VB 10WW
228
317
+
Ser
CGA
[ENA]
¢þ
>WENV181379266
OFRD01000171
[OFRD] wastewater metagenome; Exp Tend CN 100WW
3396
3485
+
Ser
CGA
[ENA]
¢þ
>WENV181384023
OFRH01007707
[OFRH] wastewater metagenome; Exp Tend NO 100WW
338
249
-
Ser
CGA
[ENA]
¢þ
>WENV181385906
OFRL01000078
[OFRL] wastewater metagenome; Lake Maggiore Cannobio
45265
45176
-
Ser
CGA
[ENA]
¢þ
>WENV181399884
OFSF01000149
[OFSF] wastewater metagenome; Exp Tend VB 100WW
23812
23723
-
Ser
CGA
[ENA]
¢þ
>W141149771
AWZU01000036
Alphaproteobacteria
Bradyrhizobium sp. ARR65 [AWZU]
76153
76242
+
Ser
CGA
[ENA]
¡û
>W141150055
AXAB01000052
Alphaproteobacteria
Bradyrhizobium sp. WSM2254 [AXAB]
51609
51698
+
Ser
CGA
[ENA]
¡û
>W141150137
AXAD01000008
Alphaproteobacteria
Bradyrhizobium arachidis USDA 3384 [AXAD]
349076
349165
+
Ser
CGA
[ENA]
¡û
>W141150218
AXAF01000003
Alphaproteobacteria
Bradyrhizobium ottawaense USDA 4 [AXAF]
15887
15798
-
Ser
CGA
[ENA]
¡û
>W141150283
AXAG01000017
Alphaproteobacteria
Bradyrhizobium japonicum USDA 38 [AXAG]
27820
27731
-
Ser
CGA
[ENA]
¡û
>W141150340
AXAH01000027
Alphaproteobacteria
Bradyrhizobium elkanii USDA 3254 [AXAH]
30591
30502
-
Ser
CGA
[ENA]
¡û
>W141150357
AXAI01000003
Alphaproteobacteria
Bradyrhizobium sp. Tv2a-2 [AXAI]
46340
46251
-
Ser
CGA
[ENA]
¡û
>W141150699
AXAP01000004
Alphaproteobacteria
Bradyrhizobium elkanii WSM2783 [AXAP]
109042
108953
-
Ser
CGA
[ENA]
¡û
>W141150748
AXAP01000161
Alphaproteobacteria
Bradyrhizobium elkanii WSM2783 [AXAP]
4637
4726
+
Ser
CGA
[ENA]
¡û
>W141150995
AXAS01000015
Alphaproteobacteria
Bradyrhizobium sp. Ec3.3 [AXAS]
169341
169430
+
Ser
CGA
[ENA]
¡û
>W141151011
AXAS01000045
Alphaproteobacteria
Bradyrhizobium sp. Ec3.3 [AXAS]
29307
29396
+
Ser
CGA
[ENA]
¡û
>W141151050
AXAT01000114
Alphaproteobacteria
Bradyrhizobium japonicum USDA 135 [AXAT]
4472
4383
-
Ser
CGA
[ENA]
¡û
>W141151105
AXAU01000008
Alphaproteobacteria
Bradyrhizobium murdochi WSM1741 [AXAU]
289838
289927
+
Ser
CGA
[ENA]
¡û
>W141151130
AXAV01000007
Alphaproteobacteria
Bradyrhizobium japonicum USDA 6 [AXAV]
29818
29729
-
Ser
CGA
[ENA]
¡û
>W141151207
AXAW01000024
Alphaproteobacteria
Bradyrhizobium elkanii USDA 3259 [AXAW]
80482
80571
+
Ser
CGA
[ENA]
¡û
>W141151248
AXAX01000017
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 122 [AXAX]
26044
25955
-
Ser
CGA
[ENA]
¡û
>W141151297
AXAY01000021
Alphaproteobacteria
Bradyrhizobium sp. WSM3983 [AXAY]
150324
150413
+
Ser
CGA
[ENA]
¡û
>W141151319
AXAZ01000014
Alphaproteobacteria
Bradyrhizobium sp. WSM1743 [AXAZ]
3362
3273
-
Ser
CGA
[ENA]
¡û
>W141151500
AXBC01000008
Alphaproteobacteria
Bradyrhizobium genosp. SA-4 SA-4 str. CB756 [AXBC]
25827
25738
-
Ser
CGA
[ENA]
¡û
>W141168811
AXVG01000001
Alphaproteobacteria
Bradyrhizobium japonicum 22 [AXVG]
109645
109556
-
Ser
CGA
[ENA]
¡û
>W141169199
AXVP01000040
Alphaproteobacteria
Bradyrhizobium japonicum USDA 123 [AXVP]
46271
46182
-
Ser
CGA
[ENA]
¡û
>W141194161
AYSU01000027
Alphaproteobacteria
Rhodopseudomonas palustris JSC-3b [AYSU]
16592
16681
+
Ser
CGA
[ENA]
¡û
>W141233871
BAWE01000002
Alphaproteobacteria
Bradyrhizobium sp. DOA9 [BAWE]
1033811
1033722
-
Ser
CGA
[ENA]
¡û
>WENV182409138
OIFG01002662
[OIFG] human gut metagenome; stool
694
783
+
Ser
CGA
[ENA]
¢þ
>W141240092
CAFK01000242
Alphaproteobacteria
Bradyrhizobium sp. STM 3843 [CAFK]
20469
20558
+
Ser
CGA
[ENA]
¡û
>W141242834
CAIU01000019
Alphaproteobacteria
Pseudaminobacter salicylatoxidans KCT001 [CAIU]
191775
191864
+
Ser
CGA
[ENA]
¡û
>W141278111
JAFC01000018
Alphaproteobacteria
Bradyrhizobium elkanii USDA 94 [JAFC]
23596
23507
-
Ser
CGA
[ENA]
¡û
>WENV182962933
OKWP01000012
[OKWP] human gut metagenome; stool
59357
59268
-
Ser
CGA
[ENA]
¢þ
>WENV182966090
OKWU01003347
[OKWU] human gut metagenome; stool
42
131
+
Ser
CGA
[ENA]
¢þ
>WENV183636471
OOKD01005391
[OOKD] human gut metagenome; Skin biopsy
1137
1226
+
Ser
CGA
[ENA]
¢þ
>WENV183724616
PJQE01035729
[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
780
691
-
Ser
CGA
[ENA]
¢þ
>WENV183726007
PJQF01059496
[PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm
372
283
-
Ser
CGA
[ENA]
¢þ
>WENV183729288
PJTQ01018243
[PJTQ] soil metagenome; Soil (3) enriched on wood chips
849
938
+
Ser
CGA
[ENA]
¢þ
>WENV183740175
PJUF01000594
[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
23519
23430
-
Ser
CGA
[ENA]
¢þ
>WENV183745163
PJUL01003764
[PJUL] feces metagenome; Chicken feces enriched on filter paper
415
504
+
Ser
CGA
[ENA]
¢þ
>WENV170706099
LNAP01001095
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
10
99
+
Ser
CGA
[ENA]
¢þ
>WENV170706279
LNAP01001832
[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
21989
21900
-
Ser
CGA
[ENA]
¢þ
>C181041887
CP019966
Alphaproteobacteria
Rhodopseudomonas palustris PS3 [CP019966]
174135
174046
-
Ser
CGA
-
¡û
>C181041935
CP019967
Alphaproteobacteria
Rhodopseudomonas palustris YSC3 [CP019967]
173632
173543
-
Ser
CGA
-
¡û
>C181113156
CP025113
Alphaproteobacteria
Bradyrhizobium sp. SK17 [CP025113]
1575033
1575122
+
Ser
CGA
-
¡û
>C181178137
CP029425
Alphaproteobacteria
Bradyrhizobium ottawaense OO99 [CP029425]
2626909
2626998
+
Ser
CGA
-
¡û
>C181178176
CP029426
Alphaproteobacteria
Bradyrhizobium amphicarpaeae 39S1MB [CP029426]
67583
67672
+
Ser
CGA
-
¡û
>C181178244
CP029427
Alphaproteobacteria
Bradyrhizobium symbiodeficiens 85S1MB [CP029427]
6802236
6802325
+
Ser
CGA
-
¡û
>C181181594
CP029603
Alphaproteobacteria
Bradyrhizobium diazoefficiens XF7 [CP029603]
514707
514618
-
Ser
CGA
-
¡û
>C181203839
LS398110
Alphaproteobacteria
Bradyrhizobium vignae [LS398110]
417586
417675
+
Ser
CGA
-
¡û
>C191019696
CP022219
Alphaproteobacteria
Bradyrhizobium guangxiense CCBAU 53363 [CP022219]
7083643
7083732
+
Ser
CGA
-
¡û
>C191019723
CP022221
Alphaproteobacteria
Bradyrhizobium zhanjiangense CCBAU 51778 [CP022221]
626999
627088
+
Ser
CGA
-
¡û
>C191071659
CP030051
Alphaproteobacteria
Bradyrhizobium guangdongense CCBAU 51649 [CP030051]
457241
457330
+
Ser
CGA
-
¡û
>C191071705
CP030053
Alphaproteobacteria
Bradyrhizobium guangzhouense CCBAU 51670 [CP030053]
509803
509892
+
Ser
CGA
-
¡û
>C191092061
CP032617
Alphaproteobacteria
Bradyrhizobium diazoefficiens 110spc4 [CP032617]
380557
380468
-
Ser
CGA
-
¡û
>W09104106
AALJ01000002
Alphaproteobacteria
Bradyrhizobium sp. BTAi1 [AALJ]
530318
530407
+
Ser
CGA
[ENA]
¡û
>W09107594
ABJR01000003
Alphaproteobacteria
Rhodopseudomonas palustris TIE-1 [ABJR]
615172
615083
-
Ser
CGA
[ENA]
¡û
>C191186640
CP041090
Alphaproteobacteria
Bradyrhizobium symbiodeficiens 65S1MB [CP041090]
6109035
6109124
+
Ser
CGA
-
¡û
>C191221056
LR590083
Alphaproteobacteria
Beijerinckiaceae bacterium RH AL1 [LR590083]
890338
890427
+
Ser
CGA
-
¡û
>W141817306
JQKO01000022
Alphaproteobacteria
Methylocapsa aurea [JQKO]
29341
29252
-
Ser
CGA
[ENA]
¡û
>W1910183092
BJNK01000023
Alphaproteobacteria
Bradyrhizobium japonicum NBRC 14783 [BJNK]
11831
11742
-
Ser
CGA
[ENA]
¡û
>W1910183149
BJNL01000087
Alphaproteobacteria
Bradyrhizobium elkanii NBRC 14791 [BJNL]
4882
4971
+
Ser
CGA
[ENA]
¡û
>W1910568894
JHAA01000011
Alphaproteobacteria
Rhodopseudomonas palustris PSBS [JHAA]
266879
266790
-
Ser
CGA
[ENA]
¡û
>W1910598273
LAXE01000001
Alphaproteobacteria
Bradyrhizobium sp. SUTN9-2 [LAXE]
484497
484408
-
Ser
CGA
[ENA]
¡û
>W1910598963
LBJC01000078
Alphaproteobacteria
Bradyrhizobium nanningense CCBAU 53390 [LBJC]
12235
12146
-
Ser
CGA
[ENA]
¡û
>W1910599022
LBJM01000210
Alphaproteobacteria
Bradyrhizobium zhanjiangense CCBAU 51787 [LBJM]
60978
61067
+
Ser
CGA
[ENA]
¡û
>W1910599034
LBJQ01000076
Alphaproteobacteria
Bradyrhizobium nanningense CCBAU 51757 [LBJQ]
12213
12124
-
Ser
CGA
[ENA]
¡û
>W1910611558
LFJC01000003
Alphaproteobacteria
Bradyrhizobium nitroreducens TSA1 [LFJC]
6150785
6150874
+
Ser
CGA
[ENA]
¡û
>W1910693446
MDEP01000039
Alphaproteobacteria
Bradyrhizobium sp. UASWS1016 [MDEP]
254754
254843
+
Ser
CGA
[ENA]
¡û
>W1910840269
MZXW01000016
Alphaproteobacteria
Bradyrhizobium betae Opo-243 [MZXW]
24297
24208
-
Ser
CGA
[ENA]
¡û
>W1911219152
NRSI01000008
Alphaproteobacteria
Rhodopseudomonas palustris DSM 126 [NRSI]
210835
210746
-
Ser
CGA
[ENA]
¡û
>W1911245271
NSJY01000008
Alphaproteobacteria
Bradyrhizobium sp. UFLA03-84 [NSJY]
64959
65048
+
Ser
CGA
[ENA]
¡û
>W1911409773
NWTE01000002
Alphaproteobacteria
Bradyrhizobium diazoefficiens Y21 [NWTE]
909389
909478
+
Ser
CGA
[ENA]
¡û
>W1911409851
NWTF01000020
Alphaproteobacteria
Bradyrhizobium ottawaense L2 [NWTF]
15569
15480
-
Ser
CGA
[ENA]
¡û
>W1911410002
NWTI01000007
Alphaproteobacteria
Bradyrhizobium sp. Y36 [NWTI]
302310
302399
+
Ser
CGA
[ENA]
¡û
>W1911629495
PSRR01000049
Alphaproteobacteria
Bradyrhizobium sp. Leo170 [PSRR]
3943
4032
+
Ser
CGA
[ENA]
¡û
>W1911629562
PSRS01000098
Alphaproteobacteria
Bradyrhizobium sp. Leo121 [PSRS]
30675
30764
+
Ser
CGA
[ENA]
¡û
>W1911629604
PSRT01000063
Alphaproteobacteria
Bradyrhizobium genosp. SA-3 SA-3 Rp7b [PSRT]
36866
36955
+
Ser
CGA
[ENA]
¡û
>W1911760575
QWVU01000034
Alphaproteobacteria
Rhodopseudomonas palustris R1 [QWVU]
119472
119383
-
Ser
CGA
[ENA]
¡û
>W1911809167
QYYC01000031
Alphaproteobacteria
Rhodopseudomonas palustris 2.1.37 [QYYC]
199234
199145
-
Ser
CGA
[ENA]
¡û
>W1911817890
QZMV01000018
Alphaproteobacteria
Bradyrhizobium sp. LVM 105 [QZMV]
19072
18983
-
Ser
CGA
[ENA]
¡û
>W1810104440
PGVG01000057
Alphaproteobacteria
Bradyrhizobium forestalis INPA54B [PGVG]
18266
18355
+
Ser
CGA
[ENA]
¡û
>W1810289876
PTFE01000057
Alphaproteobacteria
Bradyrhizobium sp. AC87j1 [PTFE]
16381
16292
-
Ser
CGA
[ENA]
¡û
>W1810367887
PVYZ01000028
Alphaproteobacteria
Rhizobium tropici NFR14 [PVYZ]
49460
49549
+
Ser
CGA
[ENA]
¡û
>W1810390439
PXYL01000008
Alphaproteobacteria
Mesorhizobium soli JCM 19897 [PXYL]
16780
16691
-
Ser
CGA
[ENA]
¡û
>W1810400127
PYFV01000030
Alphaproteobacteria
Bradyrhizobium sp. MOS004 [PYFV]
6389
6478
+
Ser
CGA
[ENA]
¡û
>W1810400145
PYFW01000001
Alphaproteobacteria
Bradyrhizobium sp. MOS003 [PYFW]
12125
12036
-
Ser
CGA
[ENA]
¡û
>W1810595911
QGGG01000004
Alphaproteobacteria
Pseudaminobacter salicylatoxidans DSM 6986 [QGGG]
260769
260858
+
Ser
CGA
[ENA]
¡û
>W1810672326
QJTI01000022
Alphaproteobacteria
Rhodopseudomonas faecalis JCM 11668 [QJTI]
34434
34345
-
Ser
CGA
[ENA]
¡û
>W1810679449
QKQS01000023
Alphaproteobacteria
Rhodopseudomonas palustris XCP [QKQS]
677525
677436
-
Ser
CGA
[ENA]
¡û
>W1810787523
QRDT01000028
Alphaproteobacteria
Rhodopseudomonas pentothenatexigens JA575 [QRDT]
44778
44689
-
Ser
CGA
[ENA]
¡û
>W1810884420
QUMP01000028
Alphaproteobacteria
Rhodopseudomonas thermotolerans JA576,NBRC 108863,KCTC 15144 [QUMP]
44778
44689
-
Ser
CGA
[ENA]
¡û
>C151066570
CP010313
Alphaproteobacteria
Bradyrhizobium japonicum E109 [CP010313]
394961
394872
-
Ser
CGA
[Ensembl]
¡û
>C151094740
CP012398
Alphaproteobacteria
Chelatococcus sp. CO-6 [CP012398]
2517504
2517593
+
Ser
CGA
-
¡û
>W10112801
ADFI01000001
Alphaproteobacteria
Rhodopseudomonas palustris DX-1 [ADFI]
603546
603457
-
Ser
CGA
[ENA]
¡û
>C10110784
CP001096
Alphaproteobacteria
Rhodopseudomonas palustris TIE-1 [CP001096]
166134
166045
-
Ser
CGA
[Ensembl]
¡û
>W1510741137
CYHC01000009
Alphaproteobacteria
Chelatococcus sambhunathii DSM 18167 [CYHC]
150368
150457
+
Ser
CGA
[ENA]
¡û
>W1510973747
JGCL01000020
Alphaproteobacteria
Bradyrhizobium japonicum FN1 [JGCL]
31282
31193
-
Ser
CGA
[ENA]
¡û
>W11116028
ADFI01000001
Alphaproteobacteria
Rhodopseudomonas palustris DX-1 [ADFI]
603546
603457
-
Ser
CGA
[ENA]
¡û
>C11118739
CP002418
Alphaproteobacteria
Rhodopseudomonas palustris [CP002418]
524046
524135
+
Ser
CGA
[Ensembl]
¡û
>W1511353655
JRPN01000045
Alphaproteobacteria
Bradyrhizobium japonicum Is-34 [JRPN]
118455
118544
+
Ser
CGA
[ENA]
¡û
>W1511507962
JXOF01000165
Alphaproteobacteria
Bradyrhizobium elkanii UASWS1015 [JXOF]
37093
37004
-
Ser
CGA
[ENA]
¡û
>W1511625936
LCZM01000130
Alphaproteobacteria
Rhodopseudomonas palustris 42OL [LCZM]
25456
25367
-
Ser
CGA
[ENA]
¡û
>W1511681436
LFIP01000129
Alphaproteobacteria
Bradyrhizobium embrapense SEMIA 6208 [LFIP]
10785
10874
+
Ser
CGA
[ENA]
¡û
>W1511681488
LFIQ01000111
Alphaproteobacteria
Bradyrhizobium pachyrhizi PAC 48 [LFIQ]
92978
92889
-
Ser
CGA
[ENA]
¡û
>W1511684042
LFLZ01000070
Alphaproteobacteria
Bradyrhizobium tropiciagri SEMIA 6148 [LFLZ]
2060
2149
+
Ser
CGA
[ENA]
¡û
>W1511706009
LGTB01000039
Alphaproteobacteria
Bradyrhizobium viridifuturi SEMIA 690 [LGTB]
64637
64726
+
Ser
CGA
[ENA]
¡û
>W1511706680
LGUJ01000002
Alphaproteobacteria
Bradyrhizobium diazoefficiens Is-1 [LGUJ]
25430
25341
-
Ser
CGA
[ENA]
¡û
>W11168430
AFOF01000011
Alphaproteobacteria
Bradyrhizobiaceae bacterium SG-6C [AFOF]
125751
125662
-
Ser
CGA
[ENA]
¡û
>C121000500
AP012206
Alphaproteobacteria
Bradyrhizobium japonicum USDA 6 [AP012206]
395784
395695
-
Ser
CGA
[Ensembl]
¡û
>C121000710
AP012279
Alphaproteobacteria
Bradyrhizobium cosmicum S23321 [AP012279]
434533
434622
+
Ser
CGA
[Ensembl]
¡û
>C161001021
AP014685
Alphaproteobacteria
Bradyrhizobium diazoefficiens NK6 [AP014685]
4043409
4043498
+
Ser
CGA
-
¡û
>C161017387
CP007569
Alphaproteobacteria
Bradyrhizobium japonicum SEMIA 5079 [CP007569]
8268051
8268140
+
Ser
CGA
[Ensembl]
¡û
>C161034236
CP011360
Alphaproteobacteria
Bradyrhizobium diazoefficiens USDA 110 [CP011360]
8876849
8876760
-
Ser
CGA
-
¡û
>C161062513
CP013949
Alphaproteobacteria
Bradyrhizobium sp. CCGE-LA001 [CP013949]
446648
446737
+
Ser
CGA
[Ensembl]
¡û
>C161097203
CP016428
Alphaproteobacteria
Bradyrhizobium icense LMTR 13 [CP016428]
8099822
8099733
-
Ser
CGA
[Ensembl]
¡û
>C161107914
LN907826
Alphaproteobacteria
Bradyrhizobium sp. [LN907826]
1008516
1008605
+
Ser
CGA
-
¡û
>W121062474
AJJK01002228
Alphaproteobacteria
Bradyrhizobium elkanii 587 [AJJK]
4843
4932
+
Ser
CGA
[ENA]
¡û
>W121065200
AJPV01000219
Alphaproteobacteria
Bradyrhizobium elkanii CCBAU 05737 [AJPV]
19120
19031
-
Ser
CGA
[ENA]
¡û
>W121065232
AJPW01000034
Alphaproteobacteria
Bradyrhizobium elkanii CCBAU 43297 [AJPW]
31822
31733
-
Ser
CGA
[ENA]
¡û
>W121065279
AJPX01000063
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 15354 [AJPX]
2260
2171
-
Ser
CGA
[ENA]
¡û
>W121065360
AJPY01000583
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 15517 [AJPY]
17621
17710
+
Ser
CGA
[ENA]
¡û
>W121065410
AJPZ01000430
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 15618 [AJPZ]
6533
6622
+
Ser
CGA
[ENA]
¡û
>W121065425
AJQA01000089
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 25435 [AJQA]
29690
29601
-
Ser
CGA
[ENA]
¡û
>W121065483
AJQB01000282
Alphaproteobacteria
Bradyrhizobium japonicum CCBAU 83623 [AJQB]
518
607
+
Ser
CGA
[ENA]
¡û
>W121065527
AJQC01000263
Alphaproteobacteria
Bradyrhizobium liaoningense CCBAU 05525 [AJQC]
16522
16433
-
Ser
CGA
[ENA]
¡û
>W121065577
AJQD01000275
Alphaproteobacteria
Bradyrhizobium liaoningense CCBAU 83689 [AJQD]
7249
7160
-
Ser
CGA
[ENA]
¡û
>W121065653
AJQE01000396
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 43298 [AJQE]
12966
12877
-
Ser
CGA
[ENA]
¡û
>W121065679
AJQF01000282
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 15544 [AJQF]
11143
11232
+
Ser
CGA
[ENA]
¡û
>W121065722
AJQG01000204
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 15615 [AJQG]
15505
15416
-
Ser
CGA
[ENA]
¡û
>W121065779
AJQH01000236
Alphaproteobacteria
Bradyrhizobium sp. CCBAU 15635 [AJQH]
15541
15452
-
Ser
CGA
[ENA]
¡û
>W121065796
AJQI01000001
Alphaproteobacteria
Bradyrhizobium diazoefficiens CCBAU 41267 [AJQI]
25421
25332
-
Ser
CGA
[ENA]
¡û
>W121065874
AJQJ01000244
Alphaproteobacteria
Bradyrhizobium yuanmingense CCBAU 05623 [AJQJ]
6884
6795
-
Ser
CGA
[ENA]
¡û
>W121065958
AJQL01000234
Alphaproteobacteria
Bradyrhizobium yuanmingense CCBAU 35157 [AJQL]
2904
2815
-
Ser
CGA
[ENA]
¡û
>W121085081
AKIY01000211
Alphaproteobacteria
Bradyrhizobium sp. YR681 [AKIY]
17299
17388
+
Ser
CGA
[ENA]
¡û
>W121110777
ALIQ01000046
Alphaproteobacteria
Chelatococcus sp. GW1 [ALIQ]
5496
5407
-
Ser
CGA
[ENA]
¡û
>W121127103
CAFH01000280
Alphaproteobacteria
Bradyrhizobium sp. ORS 285 [CAFH]
11314
11225
-
Ser
CGA
[ENA]
¡û
>W121127116
CAFI01000077
Alphaproteobacteria
Bradyrhizobium sp. ORS 375 [CAFI]
5853
5942
+
Ser
CGA
[ENA]
¡û
>W121127165
CAFJ01000168
Alphaproteobacteria
Bradyrhizobium sp. STM 3809 [CAFJ]
946
857
-
Ser
CGA
[ENA]
¡û
>W1610049388
BBEX01000094
Alphaproteobacteria
Bradyrhizobium sp. 17-4 [BBEX]
326
415
+
Ser
CGA
[ENA]
¡û
>C131000798
AP012603
Alphaproteobacteria
Bradyrhizobium oligotrophicum S58 [AP012603]
472651
472740
+
Ser
CGA
[Ensembl]
¡û
>W1610514416
FMAE01000002
Alphaproteobacteria
Bradyrhizobium yuanmingense [FMAE]
25416
25327
-
Ser
CGA
[ENA]
¡û
>W1610514626
FMAI01000019
Alphaproteobacteria
Bradyrhizobium shewense err11 [FMAI]
12856
12767
-
Ser
CGA
[ENA]
¡û
>W1610549156
JXDL01000001
Alphaproteobacteria
Bradyrhizobium sp. AT1 [JXDL]
4805559
4805470
-
Ser
CGA
[ENA]
¡û
>W1610550307
JXJM01000001
Alphaproteobacteria
Bradyrhizobium sp. DOA1 [JXJM]
6643232
6643143
-
Ser
CGA
[ENA]
¡û
>W1610631771
LIOL01000009
Alphaproteobacteria
Chelatococcus sambhunathii [LIOL]
150368
150457
+
Ser
CGA
[ENA]
¡û
>W1610666806
LJYE01000111
Alphaproteobacteria
Bradyrhizobium pachyrhizi [LJYE]
35709
35620
-
Ser
CGA
[ENA]
¡û
>W1610666817
LJYF01000007
Alphaproteobacteria
Bradyrhizobium yuanmingense [LJYF]
7426
7337
-
Ser
CGA
[ENA]
¡û
>W1610666860
LJYG01000004
Alphaproteobacteria
Bradyrhizobium manausense [LJYG]
159131
159220
+
Ser
CGA
[ENA]
¡û
>W1610717292
LLXX01000203
Alphaproteobacteria
Bradyrhizobium valentinum [LLXX]
14191
14102
-
Ser
CGA
[ENA]
¡û
>W1610717336
LLXY01000183
Alphaproteobacteria
Bradyrhizobium valentinum [LLXY]
9695
9606
-
Ser
CGA
[ENA]
¡û
>W1610717352
LLXZ01000001
Alphaproteobacteria
Bradyrhizobium jicamae [LLXZ]
35649
35738
+
Ser
CGA
[ENA]
¡û
>W1610717430
LLYA01000057
Alphaproteobacteria
Bradyrhizobium retamae [LLYA]
98985
99074
+
Ser
CGA
[ENA]
¡û
>W1610717478
LLYB01000047
Alphaproteobacteria
Bradyrhizobium lablabi [LLYB]
125599
125510
-
Ser
CGA
[ENA]
¡û
>W1610740106
LMQJ01000056
Alphaproteobacteria
Bradyrhizobium sp. Leaf396 [LMQJ]
3334
3245
-
Ser
CGA
[ENA]
¡û
>W1610751802
LNCU01000126
Alphaproteobacteria
Bradyrhizobium macuxiense BR 10303 [LNCU]
7697
7608
-
Ser
CGA
[ENA]
¡û
>W1610858047
LQQT01000016
Alphaproteobacteria
Chelatococcus daeguensis [LQQT]
151288
151377
+
Ser
CGA
[ENA]
¡û
>W1610907965
LSEF01000046
Alphaproteobacteria
Bradyrhizobium neotropicale [LSEF]
113212
113301
+
Ser
CGA
[ENA]
¡û
>W1610912271
LSIC01000199
Alphaproteobacteria
Bradyrhizobium sp. CCH5-F6 [LSIC]
30113
30202
+
Ser
CGA
[ENA]
¡û
>W1610935770
LUKO01000160
Alphaproteobacteria
Bradyrhizobium liaoningense [LUKO]
651635
651724
+
Ser
CGA
[ENA]
¡û
>W1610940702
LUUB01000107
Alphaproteobacteria
Bradyrhizobium centrolobii BR 10245 [LUUB]
105053
105142
+
Ser
CGA
[ENA]
¡û
>W1610949895
LVEM01000002
Alphaproteobacteria
Bradyrhizobium stylosanthis [LVEM]
33107
33018
-
Ser
CGA
[ENA]
¡û
>W1611061231
MAXB01000040
Alphaproteobacteria
Bradyrhizobium paxllaeri [MAXB]
29210
29121
-
Ser
CGA
[ENA]
¡û
>W1611061279
MAXC01000011
Alphaproteobacteria
Bradyrhizobium sp. LMTR 3 [MAXC]
18489
18400
-
Ser
CGA
[ENA]
¡û
>W1710045787
BBEX01000094
Alphaproteobacteria
Bradyrhizobium sp. 17-4 [BBEX]
326
415
+
Ser
CGA
[ENA]
¡û
>W1710500106
FMAE01000002
Alphaproteobacteria
Bradyrhizobium yuanmingense [FMAE]
25416
25327
-
Ser
CGA
[ENA]
¡û
>W1710500316
FMAI01000019
Alphaproteobacteria
Bradyrhizobium shewense err11 [FMAI]
12856
12767
-
Ser
CGA
[ENA]
¡û
>W1710513073
FMZW01000066
Alphaproteobacteria
Bradyrhizobium brasilense R5 [FMZW]
32008
31919
-
Ser
CGA
[ENA]
¡û
>W1710516769
FNCU01000030
Alphaproteobacteria
Bradyrhizobium sp. Rc2d [FNCU]
84174
84263
+
Ser
CGA
[ENA]
¡û
>W1710536578
FNTH01000001
Alphaproteobacteria
Bradyrhizobium erythrophlei [FNTH]
5524330
5524419
+
Ser
CGA
[ENA]
¡û
>W1710564277
FOQJ01000008
Alphaproteobacteria
Bradyrhizobium sp. cf659 [FOQJ]
271930
272019
+
Ser
CGA
[ENA]
¡û
>W1710564440
FOQM01000024
Alphaproteobacteria
Bradyrhizobium sp. Gha [FOQM]
110530
110619
+
Ser
CGA
[ENA]
¡û
>W1710569829
FOUS01000015
Alphaproteobacteria
Bradyrhizobium sp. Rc3b [FOUS]
15454
15365
-
Ser
CGA
[ENA]
¡û
>W1710571279
FOVU01000001
Alphaproteobacteria
Bradyrhizobium sp. Ghvi [FOVU]
1386591
1386680
+
Ser
CGA
[ENA]
¡û
>W1710578530
FPBQ01000023
Alphaproteobacteria
Bradyrhizobium arachidis [FPBQ]
26313
26224
-
Ser
CGA
[ENA]
¡û
>W1710652730
JXDL01000001
Alphaproteobacteria
Bradyrhizobium sp. AT1 [JXDL]
4805559
4805470
-
Ser
CGA
[ENA]
¡û
>W1710659033
JXJM01000001
Alphaproteobacteria
Bradyrhizobium sp. DOA1 [JXJM]
6643232
6643143
-
Ser
CGA
[ENA]
¡û
>W1710735569
LGHK01000019
Alphaproteobacteria
Bradyrhizobium sp. NAS96.2 [LGHK]
70817
70906
+
Ser
CGA
[ENA]
¡û
>W1710735640
LGHL01000071
Alphaproteobacteria
Bradyrhizobium sp. NAS80.1 [LGHL]
10002
9913
-
Ser
CGA
[ENA]
¡û
>W1710735689
LGHM01000071
Alphaproteobacteria
Bradyrhizobium sp. AS23.2 [LGHM]
13959
13870
-
Ser
CGA
[ENA]
¡û
>W1710764656
LIOL01000009
Alphaproteobacteria
Chelatococcus sambhunathii [LIOL]
150368
150457
+
Ser
CGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
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End
Direction
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Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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