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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.29809 (403 seq.)
>W1710998901
LQCX01000041
Gammaproteobacteria
Histophilus somni [LQCX]
1343
1254
-
Ser
GGA
[ENA]
¡û
>W1710998956
LQCY01000073
Gammaproteobacteria
Mannheimia haemolytica [LQCY]
12096
12185
+
Ser
GGA
[ENA]
¡û
>W1710999118
LQDD01000068
Gammaproteobacteria
Mannheimia haemolytica [LQDD]
12096
12185
+
Ser
GGA
[ENA]
¡û
>W1710999212
LQDF01000069
Gammaproteobacteria
Mannheimia haemolytica [LQDF]
12096
12185
+
Ser
GGA
[ENA]
¡û
>W1710999396
LQDK01000178
Gammaproteobacteria
Mannheimia haemolytica [LQDK]
12097
12186
+
Ser
GGA
[ENA]
¡û
>W1710999526
LQDN01000068
Gammaproteobacteria
Mannheimia haemolytica [LQDN]
12097
12186
+
Ser
GGA
[ENA]
¡û
>W1710999573
LQDO01000066
Gammaproteobacteria
Mannheimia haemolytica [LQDO]
12096
12185
+
Ser
GGA
[ENA]
¡û
>W1710999970
LQDZ01000047
Gammaproteobacteria
Mannheimia haemolytica [LQDZ]
12096
12185
+
Ser
GGA
[ENA]
¡û
>W1711000079
LQEB01000061
Gammaproteobacteria
Mannheimia haemolytica [LQEB]
12097
12186
+
Ser
GGA
[ENA]
¡û
>W1711000272
LQEG01000075
Gammaproteobacteria
Mannheimia haemolytica [LQEG]
12097
12186
+
Ser
GGA
[ENA]
¡û
>W1711000408
LQEJ01000058
Gammaproteobacteria
Mannheimia haemolytica [LQEJ]
12097
12186
+
Ser
GGA
[ENA]
¡û
>W1711000459
LQEK01000063
Gammaproteobacteria
Mannheimia haemolytica [LQEK]
12097
12186
+
Ser
GGA
[ENA]
¡û
>W1711000547
LQEM01000063
Gammaproteobacteria
Mannheimia haemolytica [LQEM]
12097
12186
+
Ser
GGA
[ENA]
¡û
>W1711000667
LQEP01000096
Gammaproteobacteria
Mannheimia haemolytica [LQEP]
12096
12185
+
Ser
GGA
[ENA]
¡û
>W1711000751
LQER01000081
Gammaproteobacteria
Mannheimia haemolytica [LQER]
12097
12186
+
Ser
GGA
[ENA]
¡û
>W1711000892
LQEU01000072
Gammaproteobacteria
Mannheimia haemolytica [LQEU]
12096
12185
+
Ser
GGA
[ENA]
¡û
>W1711000931
LQEV01000064
Gammaproteobacteria
Mannheimia haemolytica [LQEV]
12096
12185
+
Ser
GGA
[ENA]
¡û
>W1711001013
LQEX01000065
Gammaproteobacteria
Mannheimia haemolytica [LQEX]
12097
12186
+
Ser
GGA
[ENA]
¡û
>W1711001079
LQEZ01000046
Gammaproteobacteria
Mannheimia haemolytica [LQEZ]
12096
12185
+
Ser
GGA
[ENA]
¡û
>W1711001263
LQFD01000079
Gammaproteobacteria
Mannheimia haemolytica [LQFD]
12096
12185
+
Ser
GGA
[ENA]
¡û
>W1711001389
LQFG01000074
Gammaproteobacteria
Mannheimia haemolytica [LQFG]
12096
12185
+
Ser
GGA
[ENA]
¡û
>W1711001476
LQFI01000072
Gammaproteobacteria
Mannheimia haemolytica [LQFI]
12096
12185
+
Ser
GGA
[ENA]
¡û
>W1711001559
LQFK01000038
Gammaproteobacteria
Mannheimia haemolytica [LQFK]
12097
12186
+
Ser
GGA
[ENA]
¡û
>W1711001656
LQFM01000011
Gammaproteobacteria
Histophilus somni [LQFM]
2591
2502
-
Ser
GGA
[ENA]
¡û
>W1711001703
LQFN01000061
Gammaproteobacteria
Histophilus somni [LQFN]
1343
1254
-
Ser
GGA
[ENA]
¡û
>W1711001712
LQFO01000001
Gammaproteobacteria
Histophilus somni [LQFO]
5238
5149
-
Ser
GGA
[ENA]
¡û
>W1711001766
LQFP01000076
Gammaproteobacteria
Mannheimia haemolytica [LQFP]
12097
12186
+
Ser
GGA
[ENA]
¡û
>W1711001801
LQFQ01000044
Gammaproteobacteria
Mannheimia haemolytica [LQFQ]
12096
12185
+
Ser
GGA
[ENA]
¡û
>W1711001859
LQFR01000070
Gammaproteobacteria
Mannheimia haemolytica [LQFR]
12097
12186
+
Ser
GGA
[ENA]
¡û
>W1711001913
LQFS01000058
Gammaproteobacteria
Histophilus somni [LQFS]
1343
1254
-
Ser
GGA
[ENA]
¡û
>W1711002066
LQFW01000077
Gammaproteobacteria
Mannheimia haemolytica [LQFW]
12096
12185
+
Ser
GGA
[ENA]
¡û
>W1711002101
LQFX01000043
Gammaproteobacteria
Mannheimia haemolytica [LQFX]
12096
12185
+
Ser
GGA
[ENA]
¡û
>W1711002230
LQFZ01000040
Gammaproteobacteria
Histophilus somni [LQFZ]
23816
23727
-
Ser
GGA
[ENA]
¡û
>W1711002247
LQGA01000081
Gammaproteobacteria
Mannheimia haemolytica [LQGA]
12096
12185
+
Ser
GGA
[ENA]
¡û
>W1711002335
LQGC01000022
Gammaproteobacteria
Histophilus somni [LQGC]
43770
43859
+
Ser
GGA
[ENA]
¡û
>W1711002383
LQGD01000059
Gammaproteobacteria
Histophilus somni [LQGD]
1343
1254
-
Ser
GGA
[ENA]
¡û
>W1711002454
LQGF01000048
Gammaproteobacteria
Histophilus somni [LQGF]
2591
2502
-
Ser
GGA
[ENA]
¡û
>W1711002514
LQGG01000074
Gammaproteobacteria
Histophilus somni [LQGG]
1343
1254
-
Ser
GGA
[ENA]
¡û
>W1711002544
LQGH01000044
Gammaproteobacteria
Histophilus somni [LQGH]
2060
1971
-
Ser
GGA
[ENA]
¡û
>W1711002575
LQGI01000018
Gammaproteobacteria
Histophilus somni [LQGI]
23816
23727
-
Ser
GGA
[ENA]
¡û
>W1711002622
LQGJ01000053
Gammaproteobacteria
Histophilus somni [LQGJ]
1343
1254
-
Ser
GGA
[ENA]
¡û
>W1711002663
LQGK01000046
Gammaproteobacteria
Histophilus somni [LQGK]
1343
1254
-
Ser
GGA
[ENA]
¡û
>W1711002697
LQGL01000004
Gammaproteobacteria
Histophilus somni [LQGL]
23794
23705
-
Ser
GGA
[ENA]
¡û
>W1711002919
LQGQ01000066
Gammaproteobacteria
Mannheimia haemolytica [LQGQ]
12097
12186
+
Ser
GGA
[ENA]
¡û
>W1711308663
MAQD01000006
Gammaproteobacteria
Haemophilus parainfluenzae [MAQD]
200765
200676
-
Ser
GGA
[ENA]
¡û
>W1711308700
MAQE01000001
Gammaproteobacteria
Aggregatibacter aphrophilus [MAQE]
298669
298758
+
Ser
GGA
[ENA]
¡û
>W1711308767
MAQF01000023
Gammaproteobacteria
Aggregatibacter aphrophilus [MAQF]
232829
232918
+
Ser
GGA
[ENA]
¡û
>W1711388485
MEHR01000004
Gammaproteobacteria
Mannheimia haemolytica [MEHR]
466004
465915
-
Ser
GGA
[ENA]
¡û
>W1711466069
MJMB01000011
Gammaproteobacteria
Rodentibacter pneumotropicus [MJMB]
93493
93582
+
Ser
GGA
[ENA]
¡û
>W1711509726
MKZZ01000003
Gammaproteobacteria
Rodentibacter pneumotropicus [MKZZ]
311491
311580
+
Ser
GGA
[ENA]
¡û
>W1711509778
MLAA01000012
Gammaproteobacteria
Rodentibacter heylii [MLAA]
33784
33873
+
Ser
GGA
[ENA]
¡û
>W1711509813
MLAB01000003
Gammaproteobacteria
Rodentibacter heylii [MLAB]
63445
63534
+
Ser
GGA
[ENA]
¡û
>W1711509865
MLAC01000017
Gammaproteobacteria
Rodentibacter heylii [MLAC]
63445
63534
+
Ser
GGA
[ENA]
¡û
>W1711509911
MLAD01000018
Gammaproteobacteria
Rodentibacter heylii pneumotropicus [MLAD]
12365
12276
-
Ser
GGA
[ENA]
¡û
>W1711509969
MLAE01000031
Gammaproteobacteria
Rodentibacter heylii pneumotropicus [MLAE]
37935
38024
+
Ser
GGA
[ENA]
¡û
>W1711510015
MLAF01000030
Gammaproteobacteria
Rodentibacter heylii pneumotropicus [MLAF]
19145
19056
-
Ser
GGA
[ENA]
¡û
>W1711510073
MLAG01000038
Gammaproteobacteria
Rodentibacter ratti [MLAG]
77764
77853
+
Ser
GGA
[ENA]
¡û
>W1711510096
MLAH01000013
Gammaproteobacteria
Rodentibacter ratti [MLAH]
18797
18886
+
Ser
GGA
[ENA]
¡û
>W1711510152
MLAI01000015
Gammaproteobacteria
Rodentibacter ratti [MLAI]
100168
100257
+
Ser
GGA
[ENA]
¡û
>W1711510196
MLAJ01000002
Gammaproteobacteria
Rodentibacter ratti [MLAJ]
253704
253793
+
Ser
GGA
[ENA]
¡û
>W1711515092
MLHG01000021
Gammaproteobacteria
Rodentibacter mrazii [MLHG]
1974
1885
-
Ser
GGA
[ENA]
¡û
>W1711515419
MLHN01000007
Gammaproteobacteria
Rodentibacter genomosp. 1 [MLHN]
26432
26521
+
Ser
GGA
[ENA]
¡û
>W1711515457
MLHO01000014
Gammaproteobacteria
Rodentibacter genomosp. 2 [MLHO]
89055
89144
+
Ser
GGA
[ENA]
¡û
>W1711515531
MLHP01000026
Gammaproteobacteria
Rodentibacter genomosp. 2 [MLHP]
19226
19137
-
Ser
GGA
[ENA]
¡û
>W1711515616
MLHR01000017
Gammaproteobacteria
Rodentibacter pneumotropicus [MLHR]
3875
3786
-
Ser
GGA
[ENA]
¡û
>W1711515649
MLHS01000002
Gammaproteobacteria
Rodentibacter sp. Ppn85 [MLHS]
73608
73519
-
Ser
GGA
[ENA]
¡û
>W1711538516
MLYL01000042
Gammaproteobacteria
Mannheimia haemolytica [MLYL]
163776
163865
+
Ser
GGA
[ENA]
¡û
>W1711538591
MLYM01000067
Gammaproteobacteria
Mannheimia haemolytica [MLYM]
4779
4690
-
Ser
GGA
[ENA]
¡û
>W1711571564
MNAL01000011
Gammaproteobacteria
Glaesserella parasuis [MNAL]
47175
47264
+
Ser
GGA
[ENA]
¡û
>W1711571799
MNAP01000026
Gammaproteobacteria
Glaesserella parasuis [MNAP]
2395
2306
-
Ser
GGA
[ENA]
¡û
>W1711571849
MNAQ01000032
Gammaproteobacteria
Glaesserella parasuis [MNAQ]
2296
2207
-
Ser
GGA
[ENA]
¡û
>W1711571895
MNAR01000031
Gammaproteobacteria
Glaesserella parasuis [MNAR]
2296
2207
-
Ser
GGA
[ENA]
¡û
>W1711571949
MNAS01000030
Gammaproteobacteria
Glaesserella parasuis [MNAS]
24616
24705
+
Ser
GGA
[ENA]
¡û
>W1711571998
MNAT01000028
Gammaproteobacteria
Glaesserella parasuis [MNAT]
2288
2199
-
Ser
GGA
[ENA]
¡û
>W1711572038
MNAU01000025
Gammaproteobacteria
Glaesserella parasuis [MNAU]
2288
2199
-
Ser
GGA
[ENA]
¡û
>W1711572090
MNAV01000028
Gammaproteobacteria
Glaesserella parasuis [MNAV]
2294
2205
-
Ser
GGA
[ENA]
¡û
>W1711572124
MNAW01000017
Gammaproteobacteria
Glaesserella parasuis [MNAW]
8262
8173
-
Ser
GGA
[ENA]
¡û
>W1711572170
MNAX01000015
Gammaproteobacteria
Glaesserella parasuis [MNAX]
8262
8173
-
Ser
GGA
[ENA]
¡û
>W1711572226
MNAY01000016
Gammaproteobacteria
Glaesserella parasuis [MNAY]
38733
38822
+
Ser
GGA
[ENA]
¡û
>W1711572253
MNAZ01000004
Gammaproteobacteria
Glaesserella parasuis [MNAZ]
63630
63541
-
Ser
GGA
[ENA]
¡û
>W1711603322
MOLW01000139
Gammaproteobacteria
Glaesserella parasuis [MOLW]
232
143
-
Ser
GGA
[ENA]
¡û
>W1711603339
MOLW01000216
Gammaproteobacteria
Glaesserella parasuis [MOLW]
21277
21188
-
Ser
GGA
[ENA]
¡û
>W1711663811
MQVI01000011
Gammaproteobacteria
Pasteurellaceae bacterium 15-036681 [MQVI]
36042
35953
-
Ser
GGA
[ENA]
¡û
>W1711765831
MUXW01000041
Gammaproteobacteria
Glaesserella parasuis [MUXW]
8193
8104
-
Ser
GGA
[ENA]
¡û
>W1711765855
MUXX01000002
Gammaproteobacteria
Haemophilus paraphrohaemolyticus [MUXX]
312981
313070
+
Ser
GGA
[ENA]
¡û
>W1711765930
MUXY01000008
Gammaproteobacteria
Haemophilus parahaemolyticus [MUXY]
37985
37896
-
Ser
GGA
[ENA]
¡û
>W1711765966
MUXZ01000010
Gammaproteobacteria
Canicola haemoglobinophilus [MUXZ]
25321
25410
+
Ser
GGA
[ENA]
¡û
>W1711956736
NBTN01000003
Gammaproteobacteria
Aggregatibacter aphrophilus [NBTN]
280888
280799
-
Ser
GGA
[ENA]
¡û
>C171084158
CP018802
Gammaproteobacteria
Histophilus somni USDA-ARS-USMARC-63250 [CP018802]
376339
376428
+
Ser
GGA
-
¡û
>C171084206
CP018803
Gammaproteobacteria
Histophilus somni USDA-ARS-USMARC-63255 [CP018803]
375127
375216
+
Ser
GGA
-
¡û
>C171084254
CP018804
Gammaproteobacteria
Histophilus somni USDA-ARS-USMARC-63368 [CP018804]
376052
376141
+
Ser
GGA
-
¡û
>C171084302
CP018805
Gammaproteobacteria
Histophilus somni USDA-ARS-USMARC-63369 [CP018805]
375769
375858
+
Ser
GGA
-
¡û
>C171084350
CP018806
Gammaproteobacteria
Histophilus somni USDA-ARS-USMARC-63370 [CP018806]
375264
375353
+
Ser
GGA
-
¡û
>C171084427
CP018807
Gammaproteobacteria
Histophilus somni USDA-ARS-USMARC-63373 [CP018807]
1737141
1737052
-
Ser
GGA
-
¡û
>C171084475
CP018808
Gammaproteobacteria
Histophilus somni USDA-ARS-USMARC-63374 [CP018808]
1810273
1810184
-
Ser
GGA
-
¡û
>C171104107
CP020085
Gammaproteobacteria
Glaesserella parasuis CL120103 [CP020085]
1992557
1992646
+
Ser
GGA
-
¡û
>W131091178
AOGP01000036
Gammaproteobacteria
Mannheimia haemolytica serotype 6 str. H23 [AOGP]
4774
4685
-
Ser
GGA
[ENA]
¡û
>W131099152
AOSU01000023
Gammaproteobacteria
Glaesserella parasuis gx033 [AOSU]
2244
2155
-
Ser
GGA
[ENA]
¡û
>W131165787
ARBW01000001
Gammaproteobacteria
Rodentibacter pneumotropicus DSM 21403 [ARBW]
223666
223755
+
Ser
GGA
[ENA]
¡û
>W131159134
AQUU01000012
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans DSM 8324 [AQUU]
19256
19167
-
Ser
GGA
[ENA]
¡û
>C010987
CP000436
Alphaproteobacteria
Histophilus somni [CP000436]
1611084
1610995
-
Ser
GGA
[Ensembl]
¡û
>WENV180010997
FLSI01067438
[FLSI] metagenome; saliva
90
1
-
Ser
GGA
[ENA]
¢þ
>WENV180178223
OAWH01000061
[OAWH] human gut metagenome; faeces
6822
6733
-
Ser
GGA
[ENA]
¢þ
>WENV180178341
OAWH01006126
[OAWH] human gut metagenome; faeces
155
66
-
Ser
GGA
[ENA]
¢þ
>W141021587
AJMF01000130
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype b str. SCC4092 [AJMF]
3469
3558
+
Ser
GGA
[ENA]
¡û
>W141021629
AJMG01000020
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype c str. AAS4A [AJMG]
36585
36674
+
Ser
GGA
[ENA]
¡û
>W141021670
AJMH01000055
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype b str. S23A [AJMH]
15100
15011
-
Ser
GGA
[ENA]
¡û
>w003043
AACJ01000030
Gammaproteobacteria
Histophilus somni 2336 [AACJ]
19001
19092
+
Ser
GGA
[ENA]
¡û
>W141042493
AMEN01000028
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans Y4 [AMEN]
21411
21500
+
Ser
GGA
[ENA]
¡û
>WENV180456927
OBXT01000063
[OBXT] human gut metagenome; faeces
15662
15573
-
Ser
GGA
[ENA]
¢þ
>W141051702
ANKT01000047
Gammaproteobacteria
Glaesserella parasuis str. Nagasaki [ANKT]
7647
7736
+
Ser
GGA
[ENA]
¡û
>WENV180551623
OCJG01003859
[OCJG] human oral metagenome; human oral
612
523
-
Ser
GGA
[ENA]
¢þ
>WENV180623050
OCQD01001170
[OCQD] human gut metagenome; Infant 1 DOL 21 gut
460
549
+
Ser
GGA
[ENA]
¢þ
>W141062959
APBT01000051
Gammaproteobacteria
Glaesserella parasuis str. Nagasaki [APBT]
24775
24864
+
Ser
GGA
[ENA]
¡û
>W141062980
APBU01000025
Gammaproteobacteria
Glaesserella parasuis SW114 [APBU]
3449
3360
-
Ser
GGA
[ENA]
¡û
>W141063013
APBV01000038
Gammaproteobacteria
Glaesserella parasuis MN-H [APBV]
14045
13956
-
Ser
GGA
[ENA]
¡û
>W141063052
APBW01000034
Gammaproteobacteria
Glaesserella parasuis 12939 [APBW]
91334
91245
-
Ser
GGA
[ENA]
¡û
>W141063091
APBX01000027
Gammaproteobacteria
Glaesserella parasuis 84-15995 [APBX]
22556
22467
-
Ser
GGA
[ENA]
¡û
>W141063125
APBY01000034
Gammaproteobacteria
Glaesserella parasuis H465 [APBY]
2572
2483
-
Ser
GGA
[ENA]
¡û
>W141063184
APBZ01000030
Gammaproteobacteria
Glaesserella parasuis D74 [APBZ]
152895
152984
+
Ser
GGA
[ENA]
¡û
>W141063230
APCB01000042
Gammaproteobacteria
Glaesserella parasuis SW140 [APCB]
34257
34168
-
Ser
GGA
[ENA]
¡û
>WENV180697392
ODDE01000208
[ODDE] human metagenome; G_DNA_Supragingival plaque
10059
10148
+
Ser
GGA
[ENA]
¢þ
>WENV180697402
ODDE01000261
[ODDE] human metagenome; G_DNA_Supragingival plaque
2626
2715
+
Ser
GGA
[ENA]
¢þ
>WENV180717927
ODGE01012052
[ODGE] human metagenome; G_DNA_Buccal mucosa
750
839
+
Ser
GGA
[ENA]
¢þ
>WENV180718816
ODGI01000006
[ODGI] human metagenome; G_DNA_Buccal mucosa
64169
64080
-
Ser
GGA
[ENA]
¢þ
>WENV180721972
ODGL01040605
[ODGL] human metagenome; G_DNA_Subgingival plaque
21
110
+
Ser
GGA
[ENA]
¢þ
>WENV180727243
ODGU01003431
[ODGU] human metagenome; G_DNA_Supragingival plaque
90
1
-
Ser
GGA
[ENA]
¢þ
>WENV180728075
ODGU01023438
[ODGU] human metagenome; G_DNA_Supragingival plaque
1593
1682
+
Ser
GGA
[ENA]
¢þ
>WENV180735386
ODGZ01190181
[ODGZ] human metagenome; G_DNA_Supragingival plaque
115
204
+
Ser
GGA
[ENA]
¢þ
>WENV180735702
ODHB01000328
[ODHB] human metagenome; G_DNA_Supragingival plaque
6569
6658
+
Ser
GGA
[ENA]
¢þ
>WENV180739054
ODHD01003786
[ODHD] human metagenome; G_DNA_Supragingival plaque
1548
1459
-
Ser
GGA
[ENA]
¢þ
>WENV180739059
ODHD01003874
[ODHD] human metagenome; G_DNA_Supragingival plaque
1132
1221
+
Ser
GGA
[ENA]
¢þ
>WENV180750286
ODHS01001210
[ODHS] human metagenome; G_DNA_Supragingival plaque
329
418
+
Ser
GGA
[ENA]
¢þ
>WENV180758943
ODHY01000014
[ODHY] human metagenome; G_DNA_Buccal mucosa
53552
53463
-
Ser
GGA
[ENA]
¢þ
>WENV180782606
ODIQ01000068
[ODIQ] human metagenome; G_DNA_Tongue dorsum
22296
22207
-
Ser
GGA
[ENA]
¢þ
>WENV180786693
ODIS01000054
[ODIS] human metagenome; G_DNA_Supragingival plaque
22256
22345
+
Ser
GGA
[ENA]
¢þ
>WENV180795236
ODIZ01059431
[ODIZ] human metagenome; G_DNA_Tongue dorsum
91
2
-
Ser
GGA
[ENA]
¢þ
>WENV180801044
ODJD01006044
[ODJD] human metagenome; G_DNA_Supragingival plaque
2567
2656
+
Ser
GGA
[ENA]
¢þ
>WENV180804828
ODJG01016131
[ODJG] human metagenome; G_DNA_Supragingival plaque
33
122
+
Ser
GGA
[ENA]
¢þ
>WENV180809957
ODJK01077300
[ODJK] human metagenome; G_DNA_Subgingival plaque
38
127
+
Ser
GGA
[ENA]
¢þ
>WENV180814529
ODJO01021557
[ODJO] human metagenome; G_DNA_Supragingival plaque
90
1
-
Ser
GGA
[ENA]
¢þ
>WENV180819227
ODJR01000015
[ODJR] human metagenome; G_DNA_Tongue dorsum
75121
75210
+
Ser
GGA
[ENA]
¢þ
>WENV180822861
ODJW01000232
[ODJW] human metagenome; G_DNA_Supragingival plaque
12633
12544
-
Ser
GGA
[ENA]
¢þ
>WENV180822918
ODJW01000671
[ODJW] human metagenome; G_DNA_Supragingival plaque
1658
1569
-
Ser
GGA
[ENA]
¢þ
>WENV180830576
ODKB01006191
[ODKB] human metagenome; G_DNA_Tongue dorsum
938
849
-
Ser
GGA
[ENA]
¢þ
>WENV180831031
ODKB01030348
[ODKB] human metagenome; G_DNA_Tongue dorsum
456
367
-
Ser
GGA
[ENA]
¢þ
>WENV180831709
ODKC01000045
[ODKC] human metagenome; G_DNA_Supragingival plaque
85023
84934
-
Ser
GGA
[ENA]
¢þ
>WENV180831981
ODKC01000302
[ODKC] human metagenome; G_DNA_Supragingival plaque
36697
36786
+
Ser
GGA
[ENA]
¢þ
>WENV180832581
ODKC01002494
[ODKC] human metagenome; G_DNA_Supragingival plaque
10322
10411
+
Ser
GGA
[ENA]
¢þ
>WENV180834034
ODKD01002035
[ODKD] human metagenome; G_DNA_Supragingival plaque
3875
3786
-
Ser
GGA
[ENA]
¢þ
>W141082130
ATSY01000021
Gammaproteobacteria
Mannheimia haemolytica D193 [ATSY]
4970
4881
-
Ser
GGA
[ENA]
¡û
>W141082168
ATSZ01000008
Gammaproteobacteria
Mannheimia haemolytica MhBrain2012 [ATSZ]
52551
52462
-
Ser
GGA
[ENA]
¡û
>W141082236
ATTA01000015
Gammaproteobacteria
Mannheimia haemolytica MhSwine2000 [ATTA]
4938
4849
-
Ser
GGA
[ENA]
¡û
>WENV180842351
ODKM01009777
[ODKM] human metagenome; G_DNA_Buccal mucosa
1023
1112
+
Ser
GGA
[ENA]
¢þ
>WENV180843372
ODKN01002363
[ODKN] human metagenome; G_DNA_Supragingival plaque
2366
2455
+
Ser
GGA
[ENA]
¢þ
>W141082819
AUNK01000071
Gammaproteobacteria
Mannheimia haemolytica D35 [AUNK]
8214
8125
-
Ser
GGA
[ENA]
¡û
>WENV180847336
ODKT01064143
[ODKT] human metagenome; G_DNA_Supragingival plaque
567
656
+
Ser
GGA
[ENA]
¢þ
>W141082873
AUNL01000040
Gammaproteobacteria
Mannheimia haemolytica D38 [AUNL]
4958
4869
-
Ser
GGA
[ENA]
¡û
>WENV180859286
ODLD01000217
[ODLD] human metagenome; G_DNA_Supragingival plaque
31306
31217
-
Ser
GGA
[ENA]
¢þ
>WENV180859833
ODLD01005332
[ODLD] human metagenome; G_DNA_Supragingival plaque
740
651
-
Ser
GGA
[ENA]
¢þ
>WENV180862405
ODLE01115173
[ODLE] human metagenome; G_DNA_Tongue dorsum
201
112
-
Ser
GGA
[ENA]
¢þ
>WENV180888997
ODMN01009068
[ODMN] human metagenome; G_DNA_Supragingival plaque
91
2
-
Ser
GGA
[ENA]
¢þ
>WENV180896408
ODNI01000576
[ODNI] human metagenome; G_DNA_Tongue dorsum
10070
10159
+
Ser
GGA
[ENA]
¢þ
>WENV180914632
ODSZ01000670
[ODSZ] human metagenome; G_DNA_Buccal mucosa
1935
1846
-
Ser
GGA
[ENA]
¢þ
>WENV180914771
ODSZ01008613
[ODSZ] human metagenome; G_DNA_Buccal mucosa
633
722
+
Ser
GGA
[ENA]
¢þ
>WENV180921599
ODTJ01000163
[ODTJ] human metagenome; G_DNA_Supragingival plaque
6570
6659
+
Ser
GGA
[ENA]
¢þ
>WENV180924149
ODTK01001422
[ODTK] human metagenome; G_DNA_Supragingival plaque
10632
10721
+
Ser
GGA
[ENA]
¢þ
>WENV180927680
ODTM01002368
[ODTM] human metagenome; G_DNA_Supragingival plaque
2790
2879
+
Ser
GGA
[ENA]
¢þ
>WENV180927856
ODTM01005384
[ODTM] human metagenome; G_DNA_Supragingival plaque
2346
2257
-
Ser
GGA
[ENA]
¢þ
>WENV180934116
ODTR01026508
[ODTR] human metagenome; G_DNA_Supragingival plaque
539
450
-
Ser
GGA
[ENA]
¢þ
>WENV180939475
ODTX01041242
[ODTX] human metagenome; G_DNA_Supragingival plaque
957
1046
+
Ser
GGA
[ENA]
¢þ
>WENV180943852
ODUC01003295
[ODUC] human metagenome; G_DNA_Supragingival plaque
2622
2711
+
Ser
GGA
[ENA]
¢þ
>WENV180947441
ODUF01004571
[ODUF] human metagenome; G_DNA_Supragingival plaque
417
328
-
Ser
GGA
[ENA]
¢þ
>WENV180950222
ODUG01118368
[ODUG] human metagenome; G_DNA_Tongue dorsum
222
311
+
Ser
GGA
[ENA]
¢þ
>WENV180958045
ODUL01000222
[ODUL] human metagenome; G_DNA_Supragingival plaque
20441
20352
-
Ser
GGA
[ENA]
¢þ
>WENV180963987
ODUO01000066
[ODUO] human metagenome; G_DNA_Supragingival plaque
19328
19239
-
Ser
GGA
[ENA]
¢þ
>WENV180972756
ODUW01000132
[ODUW] human metagenome; G_DNA_Supragingival plaque
11665
11576
-
Ser
GGA
[ENA]
¢þ
>WENV180981655
ODVE01041173
[ODVE] human metagenome; G_DNA_Supragingival plaque
407
496
+
Ser
GGA
[ENA]
¢þ
>WENV180983511
ODVF01016938
[ODVF] human metagenome; G_DNA_Supragingival plaque
2185
2096
-
Ser
GGA
[ENA]
¢þ
>WENV180986437
ODVK01000008
[ODVK] human metagenome; G_DNA_Supragingival plaque
84328
84417
+
Ser
GGA
[ENA]
¢þ
>WENV180986484
ODVK01000024
[ODVK] human metagenome; G_DNA_Supragingival plaque
77331
77242
-
Ser
GGA
[ENA]
¢þ
>WENV180999810
ODVT01072780
[ODVT] human metagenome; G_DNA_Buccal mucosa
134
45
-
Ser
GGA
[ENA]
¢þ
>WENV181002859
ODVX01002274
[ODVX] human metagenome; G_DNA_Supragingival plaque
5042
4953
-
Ser
GGA
[ENA]
¢þ
>WENV181003952
ODVX01056942
[ODVX] human metagenome; G_DNA_Supragingival plaque
696
607
-
Ser
GGA
[ENA]
¢þ
>WENV181006246
ODWA01005565
[ODWA] human metagenome; G_DNA_Buccal mucosa
2496
2585
+
Ser
GGA
[ENA]
¢þ
>WENV181008214
ODWE01002889
[ODWE] human metagenome; G_DNA_Supragingival plaque
6611
6700
+
Ser
GGA
[ENA]
¢þ
>WENV181008304
ODWE01003724
[ODWE] human metagenome; G_DNA_Supragingival plaque
2219
2308
+
Ser
GGA
[ENA]
¢þ
>WENV181009324
ODWE01052602
[ODWE] human metagenome; G_DNA_Supragingival plaque
90
1
-
Ser
GGA
[ENA]
¢þ
>WENV181025316
ODXB01000004
[ODXB] human metagenome; G_DNA_Buccal mucosa
4936
4847
-
Ser
GGA
[ENA]
¢þ
>WENV181027240
ODXD01000004
[ODXD] human metagenome; G_DNA_Buccal mucosa
81133
81222
+
Ser
GGA
[ENA]
¢þ
>WENV181030146
ODXF01047500
[ODXF] human metagenome; G_DNA_Supragingival plaque
264
353
+
Ser
GGA
[ENA]
¢þ
>WENV181049476
ODYD01000315
[ODYD] human metagenome; G_DNA_Supragingival plaque
6569
6658
+
Ser
GGA
[ENA]
¢þ
>WENV181063140
ODYP01000102
[ODYP] human metagenome; G_DNA_Supragingival plaque
21095
21184
+
Ser
GGA
[ENA]
¢þ
>WENV181067239
ODZI01009954
[ODZI] human metagenome; G_DNA_Supragingival plaque
872
783
-
Ser
GGA
[ENA]
¢þ
>WENV181074138
OEAO01003635
[OEAO] human metagenome; G_DNA_Tongue dorsum
2437
2348
-
Ser
GGA
[ENA]
¢þ
>WENV181075841
OEAP01000454
[OEAP] human metagenome; G_DNA_Supragingival plaque
6549
6638
+
Ser
GGA
[ENA]
¢þ
>WENV181079312
OEAS01004559
[OEAS] human metagenome; G_DNA_Supragingival plaque
250
161
-
Ser
GGA
[ENA]
¢þ
>WENV181080394
OEAS01044952
[OEAS] human metagenome; G_DNA_Supragingival plaque
1435
1524
+
Ser
GGA
[ENA]
¢þ
>WENV181080643
OEAS01065344
[OEAS] human metagenome; G_DNA_Supragingival plaque
90
1
-
Ser
GGA
[ENA]
¢þ
>WENV181091883
OEBC01115952
[OEBC] human metagenome; G_DNA_Supragingival plaque
458
369
-
Ser
GGA
[ENA]
¢þ
>WENV181107008
OEEI01001349
[OEEI] human metagenome; G_DNA_Supragingival plaque
6575
6664
+
Ser
GGA
[ENA]
¢þ
>WENV181115537
OEEO01125480
[OEEO] human metagenome; G_DNA_Supragingival plaque
94
5
-
Ser
GGA
[ENA]
¢þ
>WENV181124070
OEFQ01008224
[OEFQ] human metagenome; G_DNA_Supragingival plaque
515
426
-
Ser
GGA
[ENA]
¢þ
>WENV181125460
OEFT01121786
[OEFT] human metagenome; G_DNA_Tongue dorsum
198
109
-
Ser
GGA
[ENA]
¢þ
>WENV181125782
OEFU01031429
[OEFU] human metagenome; G_DNA_Saliva
354
443
+
Ser
GGA
[ENA]
¢þ
>WENV181125846
OEFU01057475
[OEFU] human metagenome; G_DNA_Saliva
121
32
-
Ser
GGA
[ENA]
¢þ
>WENV181137052
OEGJ01000091
[OEGJ] human metagenome; G_DNA_Supragingival plaque
33229
33140
-
Ser
GGA
[ENA]
¢þ
>WENV181143273
OEHM01000343
[OEHM] human metagenome; G_DNA_Supragingival plaque
6549
6638
+
Ser
GGA
[ENA]
¢þ
>WENV181146736
OEHQ01020962
[OEHQ] human metagenome; G_DNA_Supragingival plaque
530
441
-
Ser
GGA
[ENA]
¢þ
>WENV181152578
OEIA01002759
[OEIA] human metagenome; G_DNA_Supragingival plaque
1068
979
-
Ser
GGA
[ENA]
¢þ
>WENV181152926
OEIA01010557
[OEIA] human metagenome; G_DNA_Supragingival plaque
132
43
-
Ser
GGA
[ENA]
¢þ
>WENV181156477
OEIE01020149
[OEIE] human metagenome; G_DNA_Supragingival plaque
841
930
+
Ser
GGA
[ENA]
¢þ
>WENV181157434
OEIG01004464
[OEIG] human metagenome; G_DNA_Hard palate
3497
3408
-
Ser
GGA
[ENA]
¢þ
>WENV181158193
OEIH01000007
[OEIH] human metagenome; G_DNA_Supragingival plaque
160423
160512
+
Ser
GGA
[ENA]
¢þ
>WENV181159830
OEIK01000270
[OEIK] human metagenome; G_DNA_Supragingival plaque
15744
15655
-
Ser
GGA
[ENA]
¢þ
>WENV181161292
OEIK01287989
[OEIK] human metagenome; G_DNA_Supragingival plaque
38
127
+
Ser
GGA
[ENA]
¢þ
>WENV181177780
OEJS01017034
[OEJS] human metagenome; G_DNA_Supragingival plaque
1007
1096
+
Ser
GGA
[ENA]
¢þ
>WENV181177781
OEJS01017210
[OEJS] human metagenome; G_DNA_Supragingival plaque
999
1088
+
Ser
GGA
[ENA]
¢þ
>WENV181178648
OEJT01000110
[OEJT] human metagenome; G_DNA_Supragingival plaque
25940
25851
-
Ser
GGA
[ENA]
¢þ
>WENV181180652
OEJU01000466
[OEJU] human metagenome; G_DNA_Supragingival plaque
16539
16450
-
Ser
GGA
[ENA]
¢þ
>WENV181181902
OEJV01000605
[OEJV] human metagenome; G_DNA_Supragingival plaque
11947
12036
+
Ser
GGA
[ENA]
¢þ
>WENV181182337
OEJV01006204
[OEJV] human metagenome; G_DNA_Supragingival plaque
2218
2307
+
Ser
GGA
[ENA]
¢þ
>WENV181429849
OGCY01002726
[OGCY] metagenome; Human gut stool
1970
2059
+
Ser
GGA
[ENA]
¢þ
>W141143376
AWSH01000002
Gammaproteobacteria
Aggregatibacter sp. oral taxon 458 oral taxon 458 str. W10330 [AWSH]
6539
6628
+
Ser
GGA
[ENA]
¡û
>WENV181457708
OGEI01006930
[OGEI] metagenome; Human gut stool
509
420
-
Ser
GGA
[ENA]
¢þ
>WENV181501780
OGGI01001648
[OGGI] metagenome; Human gut stool
11837
11748
-
Ser
GGA
[ENA]
¢þ
>WENV181560984
OGJD01000036
[OGJD] metagenome; Human gut stool
23739
23650
-
Ser
GGA
[ENA]
¢þ
>WENV181566649
OGJJ01000035
[OGJJ] metagenome; Human gut stool
93267
93356
+
Ser
GGA
[ENA]
¢þ
>WENV181579708
OGJZ01000721
[OGJZ] metagenome; Human gut stool
13084
13173
+
Ser
GGA
[ENA]
¢þ
>WENV181582491
OGKB01010772
[OGKB] metagenome; Human gut stool
2119
2208
+
Ser
GGA
[ENA]
¢þ
>W08007780
ABKM01000029
Gammaproteobacteria
Glaesserella parasuis 29755 [ABKM]
2440
2354
-
Ser
GGA
[ENA]
¡û
>WENV182000417
OHAX01041172
[OHAX] human gut metagenome; faeces
472
383
-
Ser
GGA
[ENA]
¢þ
>W141212514
AZQU01000035
Gammaproteobacteria
Glaesserella parasuis 84-17975 [AZQU]
24554
24643
+
Ser
GGA
[ENA]
¡û
>W141237230
BBIX01000009
Gammaproteobacteria
Rodentibacter pneumotropicus pneumotropica [BBIX]
559372
559461
+
Ser
GGA
[ENA]
¡û
>W141255226
CBTX010000128
Gammaproteobacteria
Glaesserella parasuis 29755 [CBTX]
2557
2468
-
Ser
GGA
[ENA]
¡û
>C08005522
CP000947
Gammaproteobacteria
Histophilus somni 2336 [CP000947]
240492
240581
+
Ser
GGA
[Ensembl]
¡û
>WENV183508843
OMHF01008843
[OMHF] human oral metagenome; human oral
441
530
+
Ser
GGA
[ENA]
¢þ
>W141401029
JDSO01000051
Gammaproteobacteria
Glaesserella parasuis HPS10 [JDSO]
35574
35663
+
Ser
GGA
[ENA]
¡û
>W141401071
JDSP01000088
Gammaproteobacteria
Glaesserella parasuis HPS11 [JDSP]
2314
2225
-
Ser
GGA
[ENA]
¡û
>C181053350
CP021644
Gammaproteobacteria
Glaesserella parasuis 29755 [CP021644]
642635
642546
-
Ser
GGA
-
¡û
>C181075111
CP023043
Gammaproteobacteria
Mannheimia haemolytica 193 [CP023043]
849505
849594
+
Ser
GGA
-
¡û
>C181075174
CP023044
Gammaproteobacteria
Mannheimia haemolytica 191 [CP023044]
918007
918096
+
Ser
GGA
-
¡û
>C181075261
CP023046
Gammaproteobacteria
Mannheimia haemolytica 187 [CP023046]
1664553
1664464
-
Ser
GGA
-
¡û
>C181075297
CP023047
Gammaproteobacteria
Mannheimia haemolytica 186 [CP023047]
914768
914857
+
Ser
GGA
-
¡û
>C181099526
CP024412
Gammaproteobacteria
Glaesserella parasuis SH0104 [CP024412]
509628
509717
+
Ser
GGA
-
¡û
>C181176099
CP029206
Gammaproteobacteria
Actinobacillus porcitonsillarum 9953L55 [CP029206]
2259879
2259790
-
Ser
GGA
-
¡û
>C181204627
LS483299
Gammaproteobacteria
Mannheimia haemolytica NCTC10609 [LS483299]
2128976
2128887
-
Ser
GGA
-
¡û
>C181213681
LS483443
Gammaproteobacteria
Aggregatibacter segnis ATCC 33393 NCTC10977 [LS483443]
81211
81300
+
Ser
GGA
-
¡û
>C181216624
LS483485
Gammaproteobacteria
Aggregatibacter aphrophilus NCTC11096 [LS483485]
34904
34993
+
Ser
GGA
-
¡û
>W09100741
AABO02000005
Gammaproteobacteria
Histophilus somni 129PT [AABO]
159051
159140
+
Ser
GGA
[ENA]
¡û
>C191206848
LR134327
Gammaproteobacteria
Aggregatibacter aphrophilus ATCC 33389 NCTC5906 [LR134327]
992336
992425
+
Ser
GGA
-
¡û
>C191210819
LR134405
Gammaproteobacteria
Rodentibacter pneumotropicus NCTC8284 [LR134405]
644154
644065
-
Ser
GGA
-
¡û
>C191212609
LR134495
Gammaproteobacteria
Mannheimia haemolytica NCTC10643 [LR134495]
1096313
1096402
+
Ser
GGA
-
¡û
>W09121976
ACFT01000034
Gammaproteobacteria
Actinobacillus minor 202 [ACFT]
20687
20776
+
Ser
GGA
[ENA]
¡û
>W09133765
ACQL01000055
Gammaproteobacteria
Actinobacillus minor NM305 [ACQL]
94380
94291
-
Ser
GGA
[ENA]
¡û
>W141555763
JHQI01000146
Gammaproteobacteria
Glaesserella parasuis [JHQI]
11014
11103
+
Ser
GGA
[ENA]
¡û
>W141621386
JJNQ01000038
Gammaproteobacteria
Glaesserella parasuis ST4-1 [JJNQ]
2293
2204
-
Ser
GGA
[ENA]
¡û
>W141621430
JJNR01000031
Gammaproteobacteria
Glaesserella parasuis ST4-2 [JJNR]
2431
2342
-
Ser
GGA
[ENA]
¡û
>C141005829
CP006619
Gammaproteobacteria
Mannheimia haemolytica USMARC_2286 [CP006619]
1799091
1799002
-
Ser
GGA
[Ensembl]
¡û
>C09100057
CP001607
Gammaproteobacteria
Aggregatibacter aphrophilus NJ8700 [CP001607]
20245
20156
-
Ser
GGA
[Ensembl]
¡û
>C09106676
CP001321
Gammaproteobacteria
Glaesserella parasuis SH0165 [CP001321]
913047
912958
-
Ser
GGA
[Ensembl]
¡û
>W1911162413
NPOT01000001
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans KCOM 1299 [NPOT]
862229
862140
-
Ser
GGA
[ENA]
¡û
>W1911198293
NRCJ01000006
Gammaproteobacteria
Aggregatibacter kilianii PN_491 [NRCJ]
44031
44120
+
Ser
GGA
[ENA]
¡û
>W1911198341
NRCK01000004
Gammaproteobacteria
Aggregatibacter kilianii PN_755 [NRCK]
174372
174461
+
Ser
GGA
[ENA]
¡û
>W1911198399
NRCL01000003
Gammaproteobacteria
Aggregatibacter kilianii PN_649 [NRCL]
181123
181212
+
Ser
GGA
[ENA]
¡û
>W1911198439
NRCM01000004
Gammaproteobacteria
Aggregatibacter kilianii PN_537 [NRCM]
174179
174268
+
Ser
GGA
[ENA]
¡û
>W1911198479
NRCN01000001
Gammaproteobacteria
Aggregatibacter kilianii PN_528 [NRCN]
624546
624635
+
Ser
GGA
[ENA]
¡û
>W1911198542
NRCO01000004
Gammaproteobacteria
Aggregatibacter kilianii PN_522 [NRCO]
174179
174268
+
Ser
GGA
[ENA]
¡û
>W1911198585
NRCP01000003
Gammaproteobacteria
Aggregatibacter kilianii PN_516 [NRCP]
174179
174268
+
Ser
GGA
[ENA]
¡û
>W1911198648
NRCQ01000002
Gammaproteobacteria
Aggregatibacter kilianii PN_452 [NRCQ]
112746
112835
+
Ser
GGA
[ENA]
¡û
>W1911198690
NRCR01000003
Gammaproteobacteria
Aggregatibacter kilianii Melo94 [NRCR]
174188
174277
+
Ser
GGA
[ENA]
¡û
>W1911198740
NRCS01000004
Gammaproteobacteria
Aggregatibacter kilianii Melo83 [NRCS]
174076
174165
+
Ser
GGA
[ENA]
¡û
>W1911198787
NRCT01000003
Gammaproteobacteria
Aggregatibacter kilianii Melo68 [NRCT]
174190
174279
+
Ser
GGA
[ENA]
¡û
>W1911198841
NRCU01000002
Gammaproteobacteria
Aggregatibacter segnis PN_651 [NRCU]
378913
379002
+
Ser
GGA
[ENA]
¡û
>W1911198908
NRCV01000004
Gammaproteobacteria
Aggregatibacter segnis PN_450 [NRCV]
48673
48584
-
Ser
GGA
[ENA]
¡û
>W1911198936
NRCW01000001
Gammaproteobacteria
Aggregatibacter segnis HK_296 [NRCW]
45561
45472
-
Ser
GGA
[ENA]
¡û
>W1911199000
NRCX01000003
Gammaproteobacteria
Aggregatibacter segnis CCUG 46700 [NRCX]
294289
294378
+
Ser
GGA
[ENA]
¡û
>W1911199040
NRCY01000002
Gammaproteobacteria
Aggregatibacter aphrophilus PN_521 [NRCY]
228641
228730
+
Ser
GGA
[ENA]
¡û
>W1911199094
NRCZ01000002
Gammaproteobacteria
Aggregatibacter aphrophilus PN_517 [NRCZ]
242226
242315
+
Ser
GGA
[ENA]
¡û
>W1911199132
NRDA01000002
Gammaproteobacteria
Aggregatibacter aphrophilus PN_444 [NRDA]
228728
228817
+
Ser
GGA
[ENA]
¡û
>W1911199189
NRDB01000002
Gammaproteobacteria
Aggregatibacter aphrophilus HK_319 [NRDB]
15703
15614
-
Ser
GGA
[ENA]
¡û
>W1911199237
NRDC01000002
Gammaproteobacteria
Aggregatibacter aphrophilus CCUG 11575 [NRDC]
220217
220128
-
Ser
GGA
[ENA]
¡û
>W1911199312
NRDD01000011
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans PN_800 [NRDD]
18327
18238
-
Ser
GGA
[ENA]
¡û
>W1911199339
NRDE01000010
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans HK_1002 [NRDE]
47825
47914
+
Ser
GGA
[ENA]
¡û
>W1911199404
NRDF01000015
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans HK_961 [NRDF]
22156
22067
-
Ser
GGA
[ENA]
¡û
>W1911199426
NRDG01000011
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans HK_929 [NRDG]
47807
47896
+
Ser
GGA
[ENA]
¡û
>W1911696703
QMGS01000105
Gammaproteobacteria
Aggregatibacter aphrophilus HK83 [QMGS]
34264
34353
+
Ser
GGA
[ENA]
¡û
>W1911775477
QXND01000100
Gammaproteobacteria
Rodentibacter pneumotropicus 394_12 [QXND]
3374
3285
-
Ser
GGA
[ENA]
¡û
>W1911775547
QXNF01000042
Gammaproteobacteria
Rodentibacter pneumotropicus FD1189 [QXNF]
324
235
-
Ser
GGA
[ENA]
¡û
>W1911775591
QXNG01000117
Gammaproteobacteria
Rodentibacter pneumotropicus 1596_07 [QXNG]
17626
17715
+
Ser
GGA
[ENA]
¡û
>W1911775598
QXNH01000008
Gammaproteobacteria
Rodentibacter pneumotropicus 607_10 [QXNH]
59551
59640
+
Ser
GGA
[ENA]
¡û
>W1911775672
QXNI01000068
Gammaproteobacteria
Rodentibacter pneumotropicus Ac84 [QXNI]
224
135
-
Ser
GGA
[ENA]
¡û
>W1911775708
QXNJ01000033
Gammaproteobacteria
Rodentibacter pneumotropicus 691_11 [QXNJ]
47372
47283
-
Ser
GGA
[ENA]
¡û
>W1911775804
QXNL01000048
Gammaproteobacteria
Rodentibacter pneumotropicus Ppn271 [QXNL]
16770
16859
+
Ser
GGA
[ENA]
¡û
>W1810048936
PCGV01000013
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans 310a [PCGV]
48017
48106
+
Ser
GGA
[ENA]
¡û
>W1810048987
PCGW01000014
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans 310b [PCGW]
48212
48301
+
Ser
GGA
[ENA]
¡û
>W1810576852
QENU01000002
Gammaproteobacteria
Pasteurella langaaensis DSM 22999 [QENU]
165404
165493
+
Ser
GGA
[ENA]
¡û
>W1810578055
QEPK01000001
Gammaproteobacteria
Aggregatibacter segnis C2000002669 [QEPK]
47425
47336
-
Ser
GGA
[ENA]
¡û
>W1810578165
QEPM01000002
Gammaproteobacteria
Aggregatibacter segnis C2001002503 [QEPM]
367117
367206
+
Ser
GGA
[ENA]
¡û
>W1810578464
QEPS01000002
Gammaproteobacteria
Haemophilus parahaemolyticus C2006000788 [QEPS]
107760
107849
+
Ser
GGA
[ENA]
¡û
>W1810578579
QEPU01000002
Gammaproteobacteria
Aggregatibacter aphrophilus C2008000870 [QEPU]
233138
233227
+
Ser
GGA
[ENA]
¡û
>W1810578633
QEPV01000002
Gammaproteobacteria
Aggregatibacter aphrophilus C2008001229 [QEPV]
223293
223204
-
Ser
GGA
[ENA]
¡û
>W1810578733
QEPX01000002
Gammaproteobacteria
Aggregatibacter aphrophilus C2008001782 [QEPX]
174655
174744
+
Ser
GGA
[ENA]
¡û
>W1810578790
QEPY01000003
Gammaproteobacteria
Aggregatibacter aphrophilus C2008003249 [QEPY]
232377
232288
-
Ser
GGA
[ENA]
¡û
>W1810578880
QEQA01000003
Gammaproteobacteria
Aggregatibacter aphrophilus C2009017515 [QEQA]
232376
232287
-
Ser
GGA
[ENA]
¡û
>W1810578992
QEQC01000002
Gammaproteobacteria
Aggregatibacter aphrophilus C2010020251 [QEQC]
192225
192136
-
Ser
GGA
[ENA]
¡û
>W1810579021
QEQD01000002
Gammaproteobacteria
Haemophilus parahaemolyticus C2010039593 [QEQD]
116922
117011
+
Ser
GGA
[ENA]
¡û
>W1810579142
QEQF01000004
Gammaproteobacteria
Haemophilus paraphrohaemolyticus C2014016342 [QEQF]
31504
31593
+
Ser
GGA
[ENA]
¡û
>C151015528
CP006957
Gammaproteobacteria
Mannheimia haemolytica USDA-ARS-USMARC-184 [CP006957]
1724603
1724514
-
Ser
GGA
[Ensembl]
¡û
>C151025689
CP007502
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans HK1651 [CP007502]
1644477
1644566
+
Ser
GGA
[Ensembl]
¡û
>C151041007
CP008984
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans [CP008984]
1644426
1644515
+
Ser
GGA
-
¡û
>C151044952
CP009158
Gammaproteobacteria
Glaesserella parasuis SH03 [CP009158]
240929
240840
-
Ser
GGA
[Ensembl]
¡û
>C151046119
CP009230
Gammaproteobacteria
Aggregatibacter aphrophilus NJ8700 [CP009230]
20244
20155
-
Ser
GGA
-
¡û
>C151046265
CP009237
Gammaproteobacteria
Glaesserella parasuis KL0318 [CP009237]
2043838
2043749
-
Ser
GGA
[Ensembl]
¡û
>C151076550
CP011098
Gammaproteobacteria
Mannheimia haemolytica 89010807N [CP011098]
920125
920214
+
Ser
GGA
[Ensembl]
¡û
>C151076613
CP011099
Gammaproteobacteria
Mannheimia haemolytica 89010807N lktA- [CP011099]
920143
920232
+
Ser
GGA
[Ensembl]
¡û
>C151090342
CP012067
Gammaproteobacteria
Aggregatibacter aphrophilus W10433 [CP012067]
931588
931499
-
Ser
GGA
-
¡û
>W10108024
ACZX01000017
Gammaproteobacteria
Mannheimia haemolytica serotype A2 str. OVINE [ACZX]
12020
12109
+
Ser
GGA
[ENA]
¡û
>W10108104
ACZY01000068
Gammaproteobacteria
Mannheimia haemolytica serotype A2 str. BOVINE [ACZY]
11902
11991
+
Ser
GGA
[ENA]
¡û
>W1510019888
BBXJ01000001
Gammaproteobacteria
Rodentibacter heylii ATCC 12555 [BBXJ]
1954637
1954726
+
Ser
GGA
[ENA]
¡û
>W10110691
ADCF01000001
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans D7S-1 [ADCF]
1755788
1755877
+
Ser
GGA
[ENA]
¡û
>W1510064458
CDBC01000003
Gammaproteobacteria
Haemophilus parahaemolyticus G321 [CDBC]
87633
87544
-
Ser
GGA
[ENA]
¡û
>C10100077
CP001733
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans D11S-1 [CP001733]
1445363
1445452
+
Ser
GGA
[Ensembl]
¡û
>W11109798
ACZJ01000009
Gammaproteobacteria
Aggregatibacter aphrophilus F0387 [ACZJ]
70789
70878
+
Ser
GGA
[ENA]
¡û
>W11110411
ACZX01000017
Gammaproteobacteria
Mannheimia haemolytica serotype A2 str. OVINE [ACZX]
12020
12109
+
Ser
GGA
[ENA]
¡û
>W11110491
ACZY01000068
Gammaproteobacteria
Mannheimia haemolytica serotype A2 str. BOVINE [ACZY]
11902
11991
+
Ser
GGA
[ENA]
¡û
>W11113128
ADCF01000001
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans D7S-1 [ADCF]
1755788
1755877
+
Ser
GGA
[ENA]
¡û
>W1511302948
JPIZ01000033
Gammaproteobacteria
Mannheimia haemolytica MH10517 [JPIZ]
5050
4961
-
Ser
GGA
[ENA]
¡û
>W1511319555
JPZI01000002
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans RhAA1 RHAA1 [JPZI]
72402
72491
+
Ser
GGA
[ENA]
¡û
>W11121346
ADOA01000052
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans D17P-3 [ADOA]
21231
21320
+
Ser
GGA
[ENA]
¡û
>W11121425
ADOB01000046
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans D17P-2 [ADOB]
62281
62370
+
Ser
GGA
[ENA]
¡û
>W11121453
ADOC01000043
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans ANH9381 [ADOC]
2794
2883
+
Ser
GGA
[ENA]
¡û
>W1511438914
JUNA01000010
Gammaproteobacteria
Aggregatibacter segnis 933_AAPH [JUNA]
45078
44989
-
Ser
GGA
[ENA]
¡û
>W11138884
AEJK01000161
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype a str. H5P1 [AEJK]
3514
3603
+
Ser
GGA
[ENA]
¡û
>W11138937
AEJL01000153
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype d str. I63B [AEJL]
21440
21529
+
Ser
GGA
[ENA]
¡û
>W11138954
AEJM01000019
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype e str. SC1083 [AEJM]
21399
21488
+
Ser
GGA
[ENA]
¡û
>W11139004
AEJN01000092
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype e str. SCC393 [AEJN]
18961
18872
-
Ser
GGA
[ENA]
¡û
>W11139034
AEJO01000002
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype f str. D18P1 [AEJO]
18981
18892
-
Ser
GGA
[ENA]
¡û
>W11139117
AEJP01000058
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype b str. SCC1398 [AEJP]
18993
18904
-
Ser
GGA
[ENA]
¡û
>W11139161
AEJR01000004
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype c str. SCC2302 [AEJR]
18984
18895
-
Ser
GGA
[ENA]
¡û
>W11143267
AEPS01000010
Gammaproteobacteria
Aggregatibacter segnis ATCC 33393 [AEPS]
131493
131582
+
Ser
GGA
[ENA]
¡û
>W11150761
AEWB01000009
Gammaproteobacteria
Aggregatibacter aphrophilus ATCC 33389 [AEWB]
45721
45810
+
Ser
GGA
[ENA]
¡û
>C121005728
CP003099
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans ANH9381 [CP003099]
1779644
1779733
+
Ser
GGA
[Ensembl]
¡û
>C121013599
CP003496
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans D7S-1 [CP003496]
1755788
1755877
+
Ser
GGA
[Ensembl]
¡û
>C161000282
AP014520
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans NUM4039 NUM 4039 [AP014520]
75958
75869
-
Ser
GGA
-
¡û
>C161048244
CP012958
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans VT1169 [CP012958]
929727
929816
+
Ser
GGA
-
¡û
>C161048327
CP012959
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans 624 [CP012959]
749755
749666
-
Ser
GGA
[Ensembl]
¡û
>C161083090
CP015099
Gammaproteobacteria
Glaesserella parasuis SC1401 [CP015099]
1807720
1807631
-
Ser
GGA
[Ensembl]
¡û
>C161098885
CP016553
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans IDH781 [CP016553]
76899
76810
-
Ser
GGA
-
¡û
>W121031496
AHGR01000002
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans RhAA1 [AHGR]
72402
72491
+
Ser
GGA
[ENA]
¡û
>W121065012
AJMU01000078
Gammaproteobacteria
Haemophilus paraphrohaemolyticus HK411 [AJMU]
23381
23292
-
Ser
GGA
[ENA]
¡û
>W121066935
AJSW01000061
Gammaproteobacteria
Haemophilus parahaemolyticus HK385 [AJSW]
60304
60393
+
Ser
GGA
[ENA]
¡û
>W1610039974
AZTO01000031
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype f str. SC29R [AZTO]
19046
18957
-
Ser
GGA
[ENA]
¡û
>W1610040005
AZTP01000002
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype e str. SC936 [AZTP]
21492
21581
+
Ser
GGA
[ENA]
¡û
>W1610040062
AZTQ01000026
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype e str. SA3096 [AZTQ]
1691
1602
-
Ser
GGA
[ENA]
¡û
>W1610040102
AZTR01000018
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans SC383s [AZTR]
15109
15198
+
Ser
GGA
[ENA]
¡û
>W1610040145
AZTS01000006
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype e str. SA2876 [AZTS]
47802
47891
+
Ser
GGA
[ENA]
¡û
>W1610040199
AZTT01000016
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype e str. SA2149 [AZTT]
19435
19524
+
Ser
GGA
[ENA]
¡û
>W1610040237
AZTU01000043
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype d str. SA508 [AZTU]
2063
2152
+
Ser
GGA
[ENA]
¡û
>W1610040275
AZTV01000349
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype d str. SA3733 [AZTV]
1667
1756
+
Ser
GGA
[ENA]
¡û
>W1610040350
AZTX01000141
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype d str. SA269 [AZTX]
1960
2049
+
Ser
GGA
[ENA]
¡û
>W1610040397
AZTY01000169
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype d str. SA2200 [AZTY]
1082
1171
+
Ser
GGA
[ENA]
¡û
>W1610040425
AZTZ01000239
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype e str. ANH9776 [AZTZ]
318
229
-
Ser
GGA
[ENA]
¡û
>C131014022
CP004752
Gammaproteobacteria
Mannheimia haemolytica USDA-ARS-USMARC-183 [CP004752]
920243
920332
+
Ser
GGA
[Ensembl]
¡û
>C131014116
CP004753
Gammaproteobacteria
Mannheimia haemolytica USDA-ARS-USMARC-185 [CP004753]
1659349
1659260
-
Ser
GGA
[Ensembl]
¡û
>C131015136
CP005383
Gammaproteobacteria
Mannheimia haemolytica M42548 [CP005383]
2379352
2379263
-
Ser
GGA
[Ensembl]
¡û
>C131015218
CP005384
Gammaproteobacteria
Glaesserella parasuis ZJ0906 [CP005384]
358921
358832
-
Ser
GGA
[Ensembl]
¡û
>C131016548
CP005972
Gammaproteobacteria
Mannheimia haemolytica D153 [CP005972]
657008
656919
-
Ser
GGA
[Ensembl]
¡û
>C131017619
CP006573
Gammaproteobacteria
Mannheimia haemolytica D171 [CP006573]
570764
570675
-
Ser
GGA
[Ensembl]
¡û
>C131017681
CP006574
Gammaproteobacteria
Mannheimia haemolytica D174 [CP006574]
697137
697048
-
Ser
GGA
[Ensembl]
¡û
>W1610609536
LFXV01000044
Gammaproteobacteria
Mannheimia haemolytica [LFXV]
4713
4624
-
Ser
GGA
[ENA]
¡û
>W1610609581
LFXW01000055
Gammaproteobacteria
Mannheimia haemolytica [LFXW]
4906
4817
-
Ser
GGA
[ENA]
¡û
>W1610609627
LFXX01000052
Gammaproteobacteria
Mannheimia haemolytica [LFXX]
4730
4641
-
Ser
GGA
[ENA]
¡û
>W1610609668
LFXY01000052
Gammaproteobacteria
Mannheimia haemolytica [LFXY]
10791
10880
+
Ser
GGA
[ENA]
¡û
>W1610609714
LFXZ01000052
Gammaproteobacteria
Mannheimia haemolytica [LFXZ]
11387
11476
+
Ser
GGA
[ENA]
¡û
>W1610609757
LFYA01000055
Gammaproteobacteria
Mannheimia haemolytica [LFYA]
4715
4626
-
Ser
GGA
[ENA]
¡û
>W1610609792
LFYB01000045
Gammaproteobacteria
Mannheimia haemolytica [LFYB]
4713
4624
-
Ser
GGA
[ENA]
¡û
>W1610609898
LFYD01000050
Gammaproteobacteria
Mannheimia haemolytica [LFYD]
8149
8238
+
Ser
GGA
[ENA]
¡û
>W1610609943
LFYE01000055
Gammaproteobacteria
Mannheimia haemolytica [LFYE]
7114
7203
+
Ser
GGA
[ENA]
¡û
>W1611056357
MAQE01000001
Gammaproteobacteria
Aggregatibacter aphrophilus [MAQE]
298669
298758
+
Ser
GGA
[ENA]
¡û
>W1611056424
MAQF01000023
Gammaproteobacteria
Aggregatibacter aphrophilus [MAQF]
232829
232918
+
Ser
GGA
[ENA]
¡û
>W1710037119
AZTO01000031
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype f str. SC29R [AZTO]
19046
18957
-
Ser
GGA
[ENA]
¡û
>W1710037150
AZTP01000002
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype e str. SC936 [AZTP]
21492
21581
+
Ser
GGA
[ENA]
¡û
>W1710037207
AZTQ01000026
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype e str. SA3096 [AZTQ]
1691
1602
-
Ser
GGA
[ENA]
¡û
>W1710037247
AZTR01000018
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans SC383s [AZTR]
15109
15198
+
Ser
GGA
[ENA]
¡û
>W1710037290
AZTS01000006
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype e str. SA2876 [AZTS]
47802
47891
+
Ser
GGA
[ENA]
¡û
>W1710037344
AZTT01000016
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype e str. SA2149 [AZTT]
19435
19524
+
Ser
GGA
[ENA]
¡û
>W1710037382
AZTU01000043
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype d str. SA508 [AZTU]
2063
2152
+
Ser
GGA
[ENA]
¡û
>W1710037420
AZTV01000349
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype d str. SA3733 [AZTV]
1667
1756
+
Ser
GGA
[ENA]
¡û
>W1710037457
AZTW01000045
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype d str. SA3033 [AZTW]
47799
47888
+
Ser
GGA
[ENA]
¡û
>W1710037495
AZTX01000141
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype d str. SA269 [AZTX]
1960
2049
+
Ser
GGA
[ENA]
¡û
>W1710037542
AZTY01000169
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype d str. SA2200 [AZTY]
1082
1171
+
Ser
GGA
[ENA]
¡û
>W1710037570
AZTZ01000239
Gammaproteobacteria
Aggregatibacter actinomycetemcomitans serotype e str. ANH9776 [AZTZ]
318
229
-
Ser
GGA
[ENA]
¡û
>W1710730823
LFXV01000044
Gammaproteobacteria
Mannheimia haemolytica [LFXV]
4713
4624
-
Ser
GGA
[ENA]
¡û
>W1710730868
LFXW01000055
Gammaproteobacteria
Mannheimia haemolytica [LFXW]
4906
4817
-
Ser
GGA
[ENA]
¡û
>W1710730914
LFXX01000052
Gammaproteobacteria
Mannheimia haemolytica [LFXX]
4730
4641
-
Ser
GGA
[ENA]
¡û
>W1710730955
LFXY01000052
Gammaproteobacteria
Mannheimia haemolytica [LFXY]
10791
10880
+
Ser
GGA
[ENA]
¡û
>W1710731001
LFXZ01000052
Gammaproteobacteria
Mannheimia haemolytica [LFXZ]
11387
11476
+
Ser
GGA
[ENA]
¡û
>W1710731044
LFYA01000055
Gammaproteobacteria
Mannheimia haemolytica [LFYA]
4715
4626
-
Ser
GGA
[ENA]
¡û
>W1710731079
LFYB01000045
Gammaproteobacteria
Mannheimia haemolytica [LFYB]
4713
4624
-
Ser
GGA
[ENA]
¡û
>W1710731132
LFYC01000046
Gammaproteobacteria
Mannheimia haemolytica [LFYC]
4906
4817
-
Ser
GGA
[ENA]
¡û
>W1710731185
LFYD01000050
Gammaproteobacteria
Mannheimia haemolytica [LFYD]
8149
8238
+
Ser
GGA
[ENA]
¡û
>W1710731230
LFYE01000055
Gammaproteobacteria
Mannheimia haemolytica [LFYE]
7114
7203
+
Ser
GGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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