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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.300133 (225 seq.)
>W1710860898
LMDG01000001
Alphaproteobacteria
Rhizobium sp. Root1220 [LMDG]
117531
117606
+
Val
TAC
[ENA]
¡û
>W1710863257
LMEY01000032
Alphaproteobacteria
Rhizobium sp. Root1334 [LMEY]
85096
85171
+
Val
TAC
[ENA]
¡û
>W1710863810
LMFK01000047
Alphaproteobacteria
Ensifer sp. Root142 [LMFK]
81968
82043
+
Val
TAC
[ENA]
¡û
>W1710864385
LMFV01000014
Alphaproteobacteria
Mesorhizobium sp. Root552 [LMFV]
11551
11476
-
Val
TAC
[ENA]
¡û
>W1710866883
LMHV01000034
Alphaproteobacteria
Rhizobium sp. Root708 [LMHV]
354361
354436
+
Val
TAC
[ENA]
¡û
>W1710867878
LMIQ01000036
Alphaproteobacteria
Ensifer sp. Root231 [LMIQ]
81989
82064
+
Val
TAC
[ENA]
¡û
>W1710868225
LMIX01000034
Alphaproteobacteria
Ensifer sp. Root258 [LMIX]
82090
82165
+
Val
TAC
[ENA]
¡û
>W1710868792
LMJJ01000034
Alphaproteobacteria
Ensifer sp. Root278 [LMJJ]
83629
83704
+
Val
TAC
[ENA]
¡û
>W1710869957
LMKD01000001
Alphaproteobacteria
Rhizobium sp. Leaf202 [LMKD]
394669
394744
+
Val
TAC
[ENA]
¡û
>W1710871965
LMLQ01000001
Alphaproteobacteria
Rhizobium sp. Leaf68 [LMLQ]
431001
431076
+
Val
TAC
[ENA]
¡û
>W1710874926
LMNZ01000020
Alphaproteobacteria
Rhizobium sp. Leaf311 [LMNZ]
126023
125948
-
Val
TAC
[ENA]
¡û
>W1710883166
LMVK01000012
Alphaproteobacteria
Agrobacterium tumefaciens str. B6 [LMVK]
430117
430042
-
Val
TAC
[ENA]
¡û
>W1710887836
LMZF01000084
Alphaproteobacteria
Rhizobium leucaenae [LMZF]
4972
5047
+
Val
TAC
[ENA]
¡û
>W1710935891
LOKU01000078
Alphaproteobacteria
Rhizobium sp. N122 [LOKU]
122481
122406
-
Val
TAC
[ENA]
¡û
>W1710987719
LPUX01000053
Alphaproteobacteria
Sinorhizobium glycinis [LPUX]
129689
129764
+
Val
TAC
[ENA]
¡û
>W1711022093
LQZT01000004
Alphaproteobacteria
Hoeflea olei [LQZT]
50159
50234
+
Val
TAC
[ENA]
¡û
>W1711120287
LUFU01000014
Alphaproteobacteria
Ensifer aridi [LUFU]
558934
558859
-
Val
TAC
[ENA]
¡û
>W1711120333
LUFV01000011
Alphaproteobacteria
Ensifer aridi [LUFV]
42481
42406
-
Val
TAC
[ENA]
¡û
>W1711120386
LUFW01000018
Alphaproteobacteria
Ensifer aridi [LUFW]
654422
654347
-
Val
TAC
[ENA]
¡û
>W1711213978
LXKT01000022
Alphaproteobacteria
Agrobacterium tumefaciens [LXKT]
547534
547459
-
Val
TAC
[ENA]
¡û
>W1711214041
LXKV01000001
Alphaproteobacteria
Agrobacterium tumefaciens [LXKV]
190618
190693
+
Val
TAC
[ENA]
¡û
>W1711214096
LXKW01000001
Alphaproteobacteria
Agrobacterium tumefaciens [LXKW]
626659
626584
-
Val
TAC
[ENA]
¡û
>W1711219666
LXPS01000039
Alphaproteobacteria
Agrobacterium tumefaciens [LXPS]
95670
95745
+
Val
TAC
[ENA]
¡û
>W1711232787
LYBK01000001
Alphaproteobacteria
Rhizobium rhizogenes [LYBK]
2295639
2295564
-
Val
TAC
[ENA]
¡û
>W1711314189
MAUG01000009
Alphaproteobacteria
Ensifer adhaerens [MAUG]
171095
171020
-
Val
TAC
[ENA]
¡û
>W1711326058
MBEZ01000049
Alphaproteobacteria
Agrobacterium vitis [MBEZ]
23803
23878
+
Val
TAC
[ENA]
¡û
>W1711326279
MBFE01000004
Alphaproteobacteria
Agrobacterium vitis [MBFE]
203616
203691
+
Val
TAC
[ENA]
¡û
>W1711337873
MBSP01000034
Alphaproteobacteria
Ensifer sp. LC13 [MBSP]
82818
82893
+
Val
TAC
[ENA]
¡û
>W1711338013
MBSS01000012
Alphaproteobacteria
Ensifer sp. LC163 [MBSS]
80002
80077
+
Val
TAC
[ENA]
¡û
>W1711353283
MDDV01000060
Alphaproteobacteria
Ensifer sp. LCM 4579 [MDDV]
79984
80059
+
Val
TAC
[ENA]
¡û
>W1711489219
MKIP01000057
Alphaproteobacteria
Xaviernesmea oryzae [MKIP]
126346
126421
+
Val
TAC
[ENA]
¡û
>W1711501845
MKSB01000206
Alphaproteobacteria
Rhizobiales bacterium 63-7 [MKSB]
11856
11781
-
Val
TAC
[ENA]
¡û
>W1711667197
MRDH01000006
Alphaproteobacteria
Agrobacterium salinitolerans YIC 5082 [MRDH]
599755
599830
+
Val
TAC
[ENA]
¡û
>W1711667388
MRDL01000032
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae USDA 2370 [MRDL]
100112
100187
+
Val
TAC
[ENA]
¡û
>W1711751566
MUNW01000032
Alphaproteobacteria
Sinorhizobium sp. A49 [MUNW]
348663
348738
+
Val
TAC
[ENA]
¡û
>C171098402
CP019701
Alphaproteobacteria
Rhizobium rhizogenes K599 [CP019701, CP019702]
1396341
1396416
+
Val
TAC
-
¡û
>C171114504
CP020896
Alphaproteobacteria
Rhizobium phaseoli Brasil 5 [CP020896]
1644236
1644161
-
Val
TAC
-
¡û
>C171123748
CP021825
Alphaproteobacteria
Sinorhizobium meliloti KH35c [CP021825]
2212084
2212159
+
Val
TAC
-
¡û
>W131104261
APCC01000028
Alphaproteobacteria
Agrobacterium tumefaciens str. Cherry 2E-2-2 [APCC]
181183
181258
+
Val
TAC
[ENA]
¡û
>W131111350
APLP01000006
Alphaproteobacteria
Agrobacterium tumefaciens WRT31 [APLP]
296457
296382
-
Val
TAC
[ENA]
¡û
>W131160483
AQWP01000001
Alphaproteobacteria
Sinorhizobium meliloti 4H41 [AQWP]
1221311
1221236
-
Val
TAC
[ENA]
¡û
>W131163371
AQZR01000001
Alphaproteobacteria
Rhizobium leguminosarum bv. phaseoli 4292 [AQZR]
646452
646377
-
Val
TAC
[ENA]
¡û
>W131174579
ARIO01000035
Alphaproteobacteria
Rhizobium sp. 2MFCol3.1 [ARIO]
163820
163895
+
Val
TAC
[ENA]
¡û
>W131214278
ATTR01000019
Alphaproteobacteria
Sinorhizobium medicae WSM244 [ATTR]
88437
88512
+
Val
TAC
[ENA]
¡û
>W131216843
ATWE01000007
Alphaproteobacteria
Ensifer sp. USDA 6670 [ATWE]
76989
77064
+
Val
TAC
[ENA]
¡û
>W131218874
ATYB01000014
Alphaproteobacteria
Sinorhizobium arboris LMG 14919 [ATYB]
1065753
1065678
-
Val
TAC
[ENA]
¡û
>W131218928
ATYC01000022
Alphaproteobacteria
Sinorhizobium medicae WSM4191 [ATYC]
988279
988204
-
Val
TAC
[ENA]
¡û
>W131219370
ATYN01000010
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae UPM1137 [ATYN]
183968
183893
-
Val
TAC
[ENA]
¡û
>W131242224
CANI01000011
Alphaproteobacteria
Rhizobium mesoamericanum STM3625 [CANI]
51816
51741
-
Val
TAC
[ENA]
¡û
>C022787
CP000738
Alphaproteobacteria
Sinorhizobium medicae WSM419 [CP000738]
959405
959330
-
Val
TAC
[Ensembl]
¡û
>W141004140
AEYE02000035
Alphaproteobacteria
Rhizobium grahamii CCGE 502 [AEYE]
496447
496522
+
Val
TAC
[ENA]
¡û
>WENV180309948
OBJS01099478
[OBJS] beach sand metagenome; beach sand
115
40
-
Val
TAC
[ENA]
¢þ
>WENV180377428
OBON01022885
[OBON] marine metagenome; sea water
389
314
-
Val
TAC
[ENA]
¢þ
>W141041787
AMCP01000025
Alphaproteobacteria
Rhizobium sp. Pop5 [AMCP]
364
439
+
Val
TAC
[ENA]
¡û
>WENV017583
AACY020487221
Marine microbial communities from Global Ocean Sampling (GOS)
932
1007
+
Val
TAC
[ENA]
>WENV181325268
OFLI01026215
[OFLI] seawater metagenome; seawater
307
382
+
Val
TAC
[ENA]
¢þ
>WENV181415139
OGCL01004652
[OGCL] hot springs metagenome; Hot spring water
6830
6905
+
Val
TAC
[ENA]
¢þ
>W141168376
AXUY01000010
Alphaproteobacteria
Agrobacterium sp. UNC420CL41Cvi [AXUY]
39884
39809
-
Val
TAC
[ENA]
¡û
>WENV181854984
OGWL01000014
[OGWL] freshwater metagenome; freshwater
7066
7141
+
Val
TAC
[ENA]
¢þ
>W08007901
ABKO01000007
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii WSM2304 [ABKO]
251157
251085
-
Val
TAC
[ENA]
¡û
>W08010442
ABQY01002415
Alphaproteobacteria
Rhizobium etli Kim 5 [ABQY] Kim 5 [ABQY]
851
926
+
Val
TAC
[ENA]
¡û
>W141207475
AZNV01000002
Alphaproteobacteria
Rhizobium sp. IBUN [AZNV]
14998
15073
+
Val
TAC
[ENA]
¡û
>W141207573
AZNX01000001
Alphaproteobacteria
Ensifer aridi TW10 [AZNX]
105535
105610
+
Val
TAC
[ENA]
¡û
>W141220320
AZXS01000094
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii CC283b [AZXS]
100151
100226
+
Val
TAC
[ENA]
¡û
>W141237972
BBJU01000015
Alphaproteobacteria
Agrobacterium rubi NBRC 13261 [BBJU]
56217
56292
+
Val
TAC
[ENA]
¡û
>WENV182553886
OJCR01048151
[OJCR] seawater metagenome; Sea water
219
144
-
Val
TAC
[ENA]
¢þ
>WENV182561959
OJDY01000420
[OJDY] seawater metagenome; Sea water
6125
6050
-
Val
TAC
[ENA]
¢þ
>WENV182562916
OJEA01010038
[OJEA] seawater metagenome; Sea water
98
23
-
Val
TAC
[ENA]
¢þ
>WENV182564256
OJEE01001146
[OJEE] seawater metagenome; Sea water
2901
2976
+
Val
TAC
[ENA]
¢þ
>WENV182569177
OJEY01001729
[OJEY] seawater metagenome; Sea water
2503
2578
+
Val
TAC
[ENA]
¢þ
>WENV182569799
OJFB01000608
[OJFB] seawater metagenome; Sea water
6535
6460
-
Val
TAC
[ENA]
¢þ
>WENV182576695
OJFY01001779
[OJFY] seawater metagenome; Sea water
1833
1758
-
Val
TAC
[ENA]
¢þ
>WENV182582305
OJHA01003967
[OJHA] seawater metagenome; Sea water
670
745
+
Val
TAC
[ENA]
¢þ
>WENV182587699
OJHN01002083
[OJHN] seawater metagenome; Sea water
1837
1912
+
Val
TAC
[ENA]
¢þ
>WENV183059324
OLHU01000711
[OLHU] seawater metagenome; Sea water
2437
2512
+
Val
TAC
[ENA]
¢þ
>WENV183620139
OOFR01009184
[OOFR] marine metagenome; seawater
560
635
+
Val
TAC
[ENA]
¢þ
>WENV183735812
PJUB01003627
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment
1471
1396
-
Val
TAC
[ENA]
¢þ
>WENV183735976
PJUB01022081
[PJUB] soil metagenome; Soil enriched on filter paper: alkali lignin treatment
397
322
-
Val
TAC
[ENA]
¢þ
>WENV183736587
PJUC01018101
[PJUC] soil metagenome; Soil enriched on filter paper
212
287
+
Val
TAC
[ENA]
¢þ
>WENV183742332
PJUH01009810
[PJUH] feces metagenome; Chicken feces (2) enriched on wood chips: alkali lignin treatment
453
528
+
Val
TAC
[ENA]
¢þ
>WENV183744455
PJUK01033172
[PJUK] feces metagenome; Chicken feces enriched on filter paper: alkali lignin treatment
86
11
-
Val
TAC
[ENA]
¢þ
>WENV170577364
FRDC01004907
[FRDC] freshwater metagenome; water
45447
45372
-
Val
TAC
[ENA]
¢þ
>W141460210
JFFS01000255
Alphaproteobacteria
Agrobacterium tumefaciens [JFFS]
5633
5558
-
Val
TAC
[ENA]
¡û
>WENV170810840
MDSW01155911
[MDSW] marine metagenome; seawater
4205
4280
+
Val
TAC
[ENA]
¢þ
>W141461529
JFGO01000051
Alphaproteobacteria
Sinorhizobium americanum CCGM7 [JFGO]
6587
6662
+
Val
TAC
[ENA]
¡û
>WENV171003621
NNBU01000877
[NNBU] plant metagenome; symbiotic tissue sample KVJ2
19915
19990
+
Val
TAC
[ENA]
¢þ
>C181029700
CP017999
Alphaproteobacteria
Rhizobium sp. Y9 [CP017999, CP018000]
921304
921229
-
Val
TAC
-
¡û
>C181037843
CP019485
Alphaproteobacteria
Sinorhizobium meliloti B401 [CP019485]
1336743
1336668
-
Val
TAC
-
¡û
>C181070655
CP022665
Alphaproteobacteria
Rhizobium leguminosarum bv. viciae BIHB 1217 [CP022665]
414164
414239
+
Val
TAC
-
¡û
>C181074768
CP022998
Alphaproteobacteria
Rhizobium sp. 11515TR [CP022998]
2044864
2044789
-
Val
TAC
-
¡û
>C181075755
CP023063
Alphaproteobacteria
Sinorhizobium sp. CCBAU 05631 [CP023063]
991403
991328
-
Val
TAC
-
¡û
>C181075859
CP023070
Alphaproteobacteria
Sinorhizobium fredii CCBAU 83666 [CP023070]
971151
971076
-
Val
TAC
-
¡û
>C181099226
CP024307
Alphaproteobacteria
Sinorhizobium fredii NXT3 [CP024307]
1392520
1392445
-
Val
TAC
-
¡û
>C181099281
CP024311
Alphaproteobacteria
Rhizobium sp. NXC24 [CP024311]
1458266
1458191
-
Val
TAC
-
¡û
>C181192370
CP030760
Alphaproteobacteria
Rhizobium leguminosarum ATCC 14479 [CP030760]
19655
19580
-
Val
TAC
-
¡û
>C191173101
CP039916
Alphaproteobacteria
Agrobacterium tumefaciens CFBP6626 [CP039916, CP039917]
920894
920819
-
Val
TAC
-
¡û
>WENV023737
AACY020749274
Marine microbial communities from Global Ocean Sampling (GOS)
366
441
+
Val
TAC
[ENA]
>W141726269
JNAE01000170
Alphaproteobacteria
Ensifer adhaerens [JNAE]
22486
22561
+
Val
TAC
[ENA]
¡û
>W141816456
JQJW01000003
Alphaproteobacteria
Rhizobium rhizogenes [JQJW]
148302
148377
+
Val
TAC
[ENA]
¡û
>W141816484
JQJX01000001
Alphaproteobacteria
Rhizobium rhizogenes [JQJX]
88989
89064
+
Val
TAC
[ENA]
¡û
>W141817915
JQLD01000001
Alphaproteobacteria
Rhizobium sp. YR519 [JQLD]
56679
56604
-
Val
TAC
[ENA]
¡û
>W1910182967
BJNI01000001
Alphaproteobacteria
Sinorhizobium fredii NBRC 14780 [BJNI]
51384
51459
+
Val
TAC
[ENA]
¡û
>W1910183029
BJNJ01000051
Alphaproteobacteria
Sinorhizobium meliloti NBRC 14782 [BJNJ]
243
168
-
Val
TAC
[ENA]
¡û
>W1910199380
FBVY01000003
Alphaproteobacteria
Agrobacterium genomosp. 2 2 str. CFBP 5494 [FBVY]
3905
3830
-
Val
TAC
[ENA]
¡û
>W1910199750
FBWH01000009
Alphaproteobacteria
Agrobacterium genomosp. 13 13 str. CFBP 6927 [FBWH]
53952
53877
-
Val
TAC
[ENA]
¡û
>W1910200067
FCNM01000003
Alphaproteobacteria
Agrobacterium tumefaciens str. CFBP 5771 [FCNM]
71577
71502
-
Val
TAC
[ENA]
¡û
>W1910200111
FCNP01000014
Alphaproteobacteria
Agrobacterium deltaense 7 str. NCPPB 1641 [FCNP]
85764
85839
+
Val
TAC
[ENA]
¡û
>W1910200147
FCNQ01000004
Alphaproteobacteria
Agrobacterium salinitolerans 9 str. Hayward 0363 Hayward0363 [FCNQ]
287875
287950
+
Val
TAC
[ENA]
¡û
>W1910229419
FNXB01000021
Alphaproteobacteria
Rhizobium tibeticum [FNXB]
24091
24016
-
Val
TAC
[ENA]
¡û
>W1910831933
MYFN01000016
Alphaproteobacteria
Shinella sumterensis MEC089 [MYFN]
83267
83342
+
Val
TAC
[ENA]
¡û
>W1910841990
NAOO01000007
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii CCGM5 [NAOO]
240058
239983
-
Val
TAC
[ENA]
¡û
>W1910842051
NAOP01000006
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii CCGM6 [NAOP]
115858
115783
-
Val
TAC
[ENA]
¡û
>W1910856540
NBUE01000017
Alphaproteobacteria
Sinorhizobium medicae Str14 [NBUE]
87078
87153
+
Val
TAC
[ENA]
¡û
>W1910856598
NBUF01000066
Alphaproteobacteria
Sinorhizobium medicae Str13 [NBUF]
50394
50469
+
Val
TAC
[ENA]
¡û
>W1910856885
NBUL01000224
Alphaproteobacteria
Sinorhizobium medicae Str7 [NBUL]
91567
91492
-
Val
TAC
[ENA]
¡û
>W1910856944
NBUM01000132
Alphaproteobacteria
Sinorhizobium medicae Str6 [NBUM]
14498
14573
+
Val
TAC
[ENA]
¡û
>W1910857037
NBUO01000341
Alphaproteobacteria
Sinorhizobium medicae Str4 [NBUO]
92457
92382
-
Val
TAC
[ENA]
¡û
>W1910891717
NEXT01000005
Alphaproteobacteria
Sinorhizobium sp. LM21 [NEXT]
427559
427484
-
Val
TAC
[ENA]
¡û
>W1911409071
NWSN01000005
Alphaproteobacteria
Rhizobium anhuiense C15 [NWSN]
303560
303485
-
Val
TAC
[ENA]
¡û
>W1911409252
NWSR01000012
Alphaproteobacteria
Rhizobium sp. L18 [NWSR]
215294
215219
-
Val
TAC
[ENA]
¡û
>W1911409296
NWST01000014
Alphaproteobacteria
Rhizobium sp. H4 [NWST]
64389
64464
+
Val
TAC
[ENA]
¡û
>W1911409419
NWSW01000007
Alphaproteobacteria
Rhizobium sp. M1 [NWSW]
267481
267406
-
Val
TAC
[ENA]
¡û
>W1911409600
NWTA01000007
Alphaproteobacteria
Rhizobium sp. M10 [NWTA]
239942
239867
-
Val
TAC
[ENA]
¡û
>W1911409753
NWTD01000004
Alphaproteobacteria
Sinorhizobium sp. NG07B [NWTD]
570986
570911
-
Val
TAC
[ENA]
¡û
>W1911412968
NWVT01000059
Alphaproteobacteria
Ensifer sp. T2_8 [NWVT]
28981
29056
+
Val
TAC
[ENA]
¡û
>W1911421153
NXDM01000003
Alphaproteobacteria
Rhizobium sophoriradicis L101 [NXDM]
64366
64441
+
Val
TAC
[ENA]
¡û
>W1911421202
NXDN01000004
Alphaproteobacteria
Rhizobium sophoriradicis JJW1 [NXDN]
64986
65061
+
Val
TAC
[ENA]
¡û
>W1911655917
QERI01000025
Alphaproteobacteria
Rhizobium sp. SEMIA 4088 [QERI]
32108
32183
+
Val
TAC
[ENA]
¡û
>W1810346071
PVBH01000002
Alphaproteobacteria
Neorhizobium tomejilense T11_12 [PVBH]
370023
370098
+
Val
TAC
[ENA]
¡û
>W1810346176
PVBJ01000005
Alphaproteobacteria
Neorhizobium sp. T25_27 [PVBJ]
361392
361467
+
Val
TAC
[ENA]
¡û
>W1810346283
PVBL01000015
Alphaproteobacteria
Neorhizobium sp. T6_25 [PVBL]
1024
949
-
Val
TAC
[ENA]
¡û
>W1810346309
PVBM01000007
Alphaproteobacteria
Neorhizobium huautlense DSM 21817 [PVBM]
75204
75279
+
Val
TAC
[ENA]
¡û
>W1810357240
PVNM01000280
Alphaproteobacteria
Sinorhizobium meliloti BM806 [PVNM]
62405
62480
+
Val
TAC
[ENA]
¡û
>W1810487628
QAYR01000004
Alphaproteobacteria
Agrobacterium pusense KCJK7997 [QAYR]
724585
724510
-
Val
TAC
[ENA]
¡û
>W1810537798
QDFL01000006
Alphaproteobacteria
Agrobacterium tumefaciens TPD7005 [QDFL]
438829
438754
-
Val
TAC
[ENA]
¡û
>W1810584589
QFBC01000020
Alphaproteobacteria
Rhizobium album NS-104 [QFBC]
114050
114125
+
Val
TAC
[ENA]
¡û
>W1810665666
QJNR01000004
Alphaproteobacteria
Ensifer sp. M14 [QJNR]
3424922
3424997
+
Val
TAC
[ENA]
¡û
>W1810677085
QKML01000010
Alphaproteobacteria
Rhizobium sp. UGM030330-04 [QKML]
541
616
+
Val
TAC
[ENA]
¡û
>W1810694691
QLMF01000002
Alphaproteobacteria
Rhizobium etli R22G [QLMF]
393261
393186
-
Val
TAC
[ENA]
¡û
>W1810695035
QLNF01000072
Alphaproteobacteria
Agrobacterium sp. MS2 [QLNF]
51393
51318
-
Val
TAC
[ENA]
¡û
>W1810706813
QMKK01000050
Alphaproteobacteria
Rhizobium tropici IGFRI Rhizo-19 [QMKK]
119197
119122
-
Val
TAC
[ENA]
¡û
>W1810917625
QWBU01000012
Alphaproteobacteria
Shinella sp. WSJ-2 [QWBU]
85035
85110
+
Val
TAC
[ENA]
¡û
>C151015748
CP006986
Alphaproteobacteria
Rhizobium sp. IE4771 [CP006986]
1661819
1661744
-
Val
TAC
[Ensembl]
¡û
>C151078529
CP011246
Alphaproteobacteria
Agrobacterium fabacearum Ach5 [CP011246, CP011247]
1200049
1199974
-
Val
TAC
[Ensembl]
¡û
>C151100840
HG518322
Alphaproteobacteria
Agrobacterium pusense IRBG74 [HG518322]
1217761
1217686
-
Val
TAC
[Ensembl]
¡û
>W10126521
AEDG01000004
Alphaproteobacteria
Sinorhizobium meliloti BL225C [AEDG]
216394
216319
-
Val
TAC
[ENA]
¡û
>WENV037615
AACY021869962
Marine microbial communities from Global Ocean Sampling (GOS)
208
283
+
Val
TAC
[ENA]
>WENV039798
AACY022036475
Marine microbial communities from Global Ocean Sampling (GOS)
886
811
-
Val
TAC
[ENA]
>C11117123
CP002511
Alphaproteobacteria
Candidatus Pelagibacter sp. IMCC9063 [CP002511]
1096393
1096318
-
Val
TAC
[Ensembl]
¡û
>W1511298365
JPFJ01000001
Alphaproteobacteria
Rhizobium sp. H41 [JPFJ]
228159
228084
-
Val
TAC
[ENA]
¡û
>W1511318808
JPYQ01000012
Alphaproteobacteria
Rhizobium sp. YS-1r [JPYQ]
127160
127235
+
Val
TAC
[ENA]
¡û
>C11120811
CP002781
Alphaproteobacteria
Sinorhizobium meliloti AK83 [CP002781, CP002782, CP002783]
1075965
1075890
-
Val
TAC
[Ensembl]
¡û
>C11120881
CP001830
Alphaproteobacteria
Sinorhizobium meliloti SM11 [CP001830]
2290667
2290742
+
Val
TAC
[Ensembl]
¡û
>WENV042776
AACY022264911
Marine microbial communities from Global Ocean Sampling (GOS)
97
22
-
Val
TAC
[ENA]
>W1511433646
JUHJ01000007
Alphaproteobacteria
Rhizobium sp. YR528 [JUHJ]
54984
54909
-
Val
TAC
[ENA]
¡û
>W1511433688
JUHK01000006
Alphaproteobacteria
Rhizobium tropici CF286 [JUHK]
304855
304780
-
Val
TAC
[ENA]
¡û
>WENV043847
AACY022363671
Marine microbial communities from Global Ocean Sampling (GOS)
184
109
-
Val
TAC
[ENA]
>W11133782
AEDG01000004
Alphaproteobacteria
Sinorhizobium meliloti BL225C [AEDG]
216394
216319
-
Val
TAC
[ENA]
¡û
>WENV049092
AACY022769848
Marine microbial communities from Global Ocean Sampling (GOS)
460
535
+
Val
TAC
[ENA]
>C121014618
CP003563
Alphaproteobacteria
Sinorhizobium fredii USDA 257 [CP003563]
3469589
3469514
-
Val
TAC
[Ensembl]
¡û
>C121018165
HE616890
Alphaproteobacteria
Sinorhizobium fredii HH103 [HE616890]
1068972
1068897
-
Val
TAC
[Ensembl]
¡û
>WENV055435
AACY023227257
Marine microbial communities from Global Ocean Sampling (GOS)
1278
1353
+
Val
TAC
[ENA]
>C161005621
CP007225
Alphaproteobacteria
Agrobacterium tumefaciens LBA4213 (Ach5) [CP007225, CP007226]
1200127
1200052
-
Val
TAC
[Ensembl]
¡û
>C161005680
CP007236
Alphaproteobacteria
Ensifer adhaerens OV14 [CP007236, CP007237]
2247723
2247648
-
Val
TAC
[Ensembl]
¡û
>C161056523
CP013495
Alphaproteobacteria
Rhizobium sp. N621 [CP013495]
1662319
1662244
-
Val
TAC
-
¡û
>C161056625
CP013505
Alphaproteobacteria
Rhizobium sp. N1341 [CP013505]
1652104
1652029
-
Val
TAC
-
¡û
>C161057031
CP013547
Alphaproteobacteria
Rhizobium phaseoli R611 [CP013547]
1691539
1691464
-
Val
TAC
-
¡û
>C161057082
CP013552
Alphaproteobacteria
Rhizobium phaseoli N931 [CP013552]
1679278
1679203
-
Val
TAC
-
¡û
>C161057133
CP013557
Alphaproteobacteria
Rhizobium phaseoli N841 [CP013557]
1644968
1644893
-
Val
TAC
-
¡û
>C161057236
CP013568
Alphaproteobacteria
Rhizobium phaseoli N771 [CP013568]
1611762
1611687
-
Val
TAC
-
¡û
>C161057543
CP013601
Alphaproteobacteria
Rhizobium sp. N731 [CP013601]
1642658
1642583
-
Val
TAC
-
¡û
>C161058039
CP013636
Alphaproteobacteria
Rhizobium sp. N541 [CP013636]
1691651
1691576
-
Val
TAC
-
¡û
>C161092115
CP015880
Alphaproteobacteria
Ensifer adhaerens Casida A [CP015880]
1058933
1058858
-
Val
TAC
[Ensembl]
¡û
>WENV058091
AACY023317248
Marine microbial communities from Global Ocean Sampling (GOS)
815
740
-
Val
TAC
[ENA]
>WENV058525
AACY023332057
Marine microbial communities from Global Ocean Sampling (GOS)
86
161
+
Val
TAC
[ENA]
>WENV058532
AACY023332238
Marine microbial communities from Global Ocean Sampling (GOS)
58
133
+
Val
TAC
[ENA]
>WENV058907
AACY023346565
Marine microbial communities from Global Ocean Sampling (GOS)
504
579
+
Val
TAC
[ENA]
>W121070072
AJWE01000090
Alphaproteobacteria
Rhizobium sp. CF142 [AJWE]
50390
50315
-
Val
TAC
[ENA]
¡û
>W121084269
AKHZ01000006
Alphaproteobacteria
Rhizobium leguminosarum bv. trifolii WSM597 [AKHZ]
125834
125909
+
Val
TAC
[ENA]
¡û
>W121104006
AKZZ01000086
Alphaproteobacteria
Sinorhizobium meliloti 5A14 [AKZZ]
72303
72378
+
Val
TAC
[ENA]
¡û
>WENV006137
AACY020168900
Marine microbial communities from Global Ocean Sampling (GOS)
2829
2904
+
Val
TAC
[ENA]
>W1610021037
ASYB01000001
Alphaproteobacteria
Agrobacterium sp. TS43 [ASYB]
86138
86063
-
Val
TAC
[ENA]
¡û
>W1610024613
AUSY01000039
Alphaproteobacteria
Sinorhizobium sp. GW3 [AUSY]
83790
83865
+
Val
TAC
[ENA]
¡û
>W1610024727
AUTA01000132
Alphaproteobacteria
Sinorhizobium sp. Sb3 [AUTA]
82343
82418
+
Val
TAC
[ENA]
¡û
>W1610024740
AUTB01000012
Alphaproteobacteria
Sinorhizobium sp. GL2 [AUTB]
25052
25127
+
Val
TAC
[ENA]
¡û
>W1610024797
AUTC01000055
Alphaproteobacteria
Sinorhizobium fredii USDA 205 [AUTC]
137479
137404
-
Val
TAC
[ENA]
¡û
>W1610056617
BBWK01000048
Alphaproteobacteria
Aureimonas sp. AU4 [BBWK]
102239
102314
+
Val
TAC
[ENA]
¡û
>WENV007042
AACY020183563
Marine microbial communities from Global Ocean Sampling (GOS)
4063
4138
+
Val
TAC
[ENA]
>C131011525
CP004015
Alphaproteobacteria
Rhizobium tropici CIAT 899 [CP004015]
1411796
1411721
-
Val
TAC
[Ensembl]
¡û
>W1610514492
FMAF01000029
Alphaproteobacteria
Rhizobium lusitanum [FMAF]
155
80
-
Val
TAC
[ENA]
¡û
>W1610514565
FMAH01000004
Alphaproteobacteria
Rhizobium miluonense [FMAH]
3787
3712
-
Val
TAC
[ENA]
¡û
>W1610514669
FMAJ01000009
Alphaproteobacteria
Rhizobium aethiopicum HBR26 [FMAJ]
66147
66222
+
Val
TAC
[ENA]
¡û
>W1610723244
LMDG01000001
Alphaproteobacteria
Rhizobium sp. Root1220 [LMDG]
117531
117606
+
Val
TAC
[ENA]
¡û
>W1610725603
LMEY01000032
Alphaproteobacteria
Rhizobium sp. Root1334 [LMEY]
85096
85171
+
Val
TAC
[ENA]
¡û
>W1610726156
LMFK01000047
Alphaproteobacteria
Ensifer sp. Root142 [LMFK]
81968
82043
+
Val
TAC
[ENA]
¡û
>W1610726731
LMFV01000014
Alphaproteobacteria
Mesorhizobium sp. Root552 [LMFV]
11551
11476
-
Val
TAC
[ENA]
¡û
>W1610729229
LMHV01000034
Alphaproteobacteria
Rhizobium sp. Root708 [LMHV]
354361
354436
+
Val
TAC
[ENA]
¡û
>W1610730224
LMIQ01000036
Alphaproteobacteria
Ensifer sp. Root231 [LMIQ]
81989
82064
+
Val
TAC
[ENA]
¡û
>W1610730571
LMIX01000034
Alphaproteobacteria
Ensifer sp. Root258 [LMIX]
82090
82165
+
Val
TAC
[ENA]
¡û
>W1610731138
LMJJ01000034
Alphaproteobacteria
Ensifer sp. Root278 [LMJJ]
83629
83704
+
Val
TAC
[ENA]
¡û
>W1610732303
LMKD01000001
Alphaproteobacteria
Rhizobium sp. Leaf202 [LMKD]
394669
394744
+
Val
TAC
[ENA]
¡û
>W1610734311
LMLQ01000001
Alphaproteobacteria
Rhizobium sp. Leaf68 [LMLQ]
431001
431076
+
Val
TAC
[ENA]
¡û
>W1610737272
LMNZ01000020
Alphaproteobacteria
Rhizobium sp. Leaf311 [LMNZ]
126023
125948
-
Val
TAC
[ENA]
¡û
>W1610745092
LMVK01000012
Alphaproteobacteria
Agrobacterium tumefaciens str. B6 [LMVK]
430117
430042
-
Val
TAC
[ENA]
¡û
>W1610748536
LMZF01000084
Alphaproteobacteria
Rhizobium leucaenae [LMZF]
4972
5047
+
Val
TAC
[ENA]
¡û
>W1610842663
LPUX01000053
Alphaproteobacteria
Sinorhizobium glycinis [LPUX]
129689
129764
+
Val
TAC
[ENA]
¡û
>W1611000982
LXKT01000022
Alphaproteobacteria
Agrobacterium tumefaciens [LXKT]
547534
547459
-
Val
TAC
[ENA]
¡û
>W1611001045
LXKV01000001
Alphaproteobacteria
Agrobacterium tumefaciens [LXKV]
190618
190693
+
Val
TAC
[ENA]
¡û
>W1611001100
LXKW01000001
Alphaproteobacteria
Agrobacterium tumefaciens [LXKW]
626659
626584
-
Val
TAC
[ENA]
¡û
>W1611004138
LXPS01000039
Alphaproteobacteria
Agrobacterium tumefaciens [LXPS]
95670
95745
+
Val
TAC
[ENA]
¡û
>W1611013868
LYBK01000001
Alphaproteobacteria
Rhizobium rhizogenes [LYBK]
2295639
2295564
-
Val
TAC
[ENA]
¡û
>W1611059064
MAUG01000009
Alphaproteobacteria
Ensifer adhaerens [MAUG]
171095
171020
-
Val
TAC
[ENA]
¡û
>W1611066801
MBSP01000034
Alphaproteobacteria
Ensifer sp. LC13 [MBSP]
82818
82893
+
Val
TAC
[ENA]
¡û
>W1611066941
MBSS01000012
Alphaproteobacteria
Ensifer sp. LC163 [MBSS]
80002
80077
+
Val
TAC
[ENA]
¡û
>W1710017749
ASYB01000001
Alphaproteobacteria
Agrobacterium sp. TS43 [ASYB]
86138
86063
-
Val
TAC
[ENA]
¡û
>W1710021054
AUSY01000039
Alphaproteobacteria
Sinorhizobium sp. GW3 [AUSY]
83790
83865
+
Val
TAC
[ENA]
¡û
>W1710021168
AUTA01000132
Alphaproteobacteria
Sinorhizobium sp. Sb3 [AUTA]
82343
82418
+
Val
TAC
[ENA]
¡û
>W1710021181
AUTB01000012
Alphaproteobacteria
Sinorhizobium sp. GL2 [AUTB]
25052
25127
+
Val
TAC
[ENA]
¡û
>W1710021238
AUTC01000055
Alphaproteobacteria
Sinorhizobium fredii USDA 205 [AUTC]
137479
137404
-
Val
TAC
[ENA]
¡û
>W1710053316
BBWK01000048
Alphaproteobacteria
Aureimonas sp. AU4 [BBWK]
102239
102314
+
Val
TAC
[ENA]
¡û
>W1710500182
FMAF01000029
Alphaproteobacteria
Rhizobium lusitanum [FMAF]
155
80
-
Val
TAC
[ENA]
¡û
>W1710500255
FMAH01000004
Alphaproteobacteria
Rhizobium miluonense [FMAH]
3787
3712
-
Val
TAC
[ENA]
¡û
>W1710500359
FMAJ01000009
Alphaproteobacteria
Rhizobium aethiopicum HBR26 [FMAJ]
66147
66222
+
Val
TAC
[ENA]
¡û
>W1710521778
FNGR01000002
Alphaproteobacteria
Ensifer sp. YR511 [FNGR]
81648
81723
+
Val
TAC
[ENA]
¡û
>W1710561980
FOON01000021
Alphaproteobacteria
Ensifer sp. OV372 [FOON]
17755
17680
-
Val
TAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
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